RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 SSBP3-AS1Q7Z2R9 100 aa5.53□□□□□ -1.52
TARDBP-218ENST00000617172 A0A0J9YXY3 114 aa5.52□□□□□ -1.53
TARDBP-218ENST00000617172 C5orf52A6NGY3 159 aa5.52□□□□□ -1.53
TARDBP-218ENST00000617172 HINT1P49773 126 aaPredicted RBP5.52□□□□□ -1.53
TARDBP-218ENST00000617172 MUC2Q02817 5179 aa5.51□□□□□ -1.53
TARDBP-218ENST00000617172 TRAV23DV6A0A075B6W5 121 aa5.51□□□□□ -1.53
TARDBP-218ENST00000617172 SYS1-DBNDD2H3BUS1 97 aa5.51□□□□□ -1.53
TARDBP-218ENST00000617172 ERC2-IT1O76042 136 aa5.51□□□□□ -1.53
TARDBP-218ENST00000617172 RPS29P62273 56 aaKnown RBP5.51□□□□□ -1.53
TARDBP-218ENST00000617172 Q9BRP9 147 aa5.51□□□□□ -1.53
TARDBP-218ENST00000617172 ZNF73O43830 326 aaPredicted RBP5.5□□□□□ -1.53
TARDBP-218ENST00000617172 ADAMTSL4-AS1Q5T5F5 129 aa5.5□□□□□ -1.53
TARDBP-218ENST00000617172 IGLV9-49A0A0B4J1Y8 123 aa5.49□□□□□ -1.53
TARDBP-218ENST00000617172 HIST1H2BKO60814 126 aa5.49□□□□□ -1.53
TARDBP-218ENST00000617172 TIMM17BO60830 172 aa5.49□□□□□ -1.53
TARDBP-218ENST00000617172 HIST1H2BJP06899 126 aa5.49□□□□□ -1.53
TARDBP-218ENST00000617172 HIST1H2BOP23527 126 aa5.49□□□□□ -1.53
TARDBP-218ENST00000617172 HIST1H2BBP33778 126 aa5.49□□□□□ -1.53
TARDBP-218ENST00000617172 HIST1H2BDP58876 126 aa5.49□□□□□ -1.53
TARDBP-218ENST00000617172 HIST1H2BCP62807 126 aa5.49□□□□□ -1.53
TARDBP-218ENST00000617172 MOBPQ13875 183 aa5.49□□□□□ -1.53
TARDBP-218ENST00000617172 HIST2H2BEQ16778 126 aa5.49□□□□□ -1.53
TARDBP-218ENST00000617172 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.49□□□□□ -1.53
TARDBP-218ENST00000617172 LINC01545Q5VT33 79 aa5.49□□□□□ -1.53
TARDBP-218ENST00000617172 PET117Q6UWS5 81 aa5.49□□□□□ -1.53
TARDBP-218ENST00000617172 SOSTDC1Q6X4U4 206 aa5.49□□□□□ -1.53
TARDBP-218ENST00000617172 HIST1H2BHQ93079 126 aa5.49□□□□□ -1.53
TARDBP-218ENST00000617172 HIST1H2BNQ99877 126 aa5.49□□□□□ -1.53
TARDBP-218ENST00000617172 HIST1H2BMQ99879 126 aa5.49□□□□□ -1.53
TARDBP-218ENST00000617172 SPANXCQ9NY87 97 aa5.49□□□□□ -1.53
TARDBP-218ENST00000617172 TMA7Q9Y2S6 64 aaKnown RBP5.49□□□□□ -1.53
TARDBP-218ENST00000617172 NPC2P61916 151 aa5.48□□□□□ -1.53
TARDBP-218ENST00000617172 SLC25A20O43772 301 aa5.47□□□□□ -1.53
TARDBP-218ENST00000617172 KRTAP13-3Q3SY46 172 aa5.47□□□□□ -1.53
TARDBP-218ENST00000617172 LINC00518Q8N0U6 118 aa5.47□□□□□ -1.53
TARDBP-218ENST00000617172 OR13C6PQ8NH95 151 aa5.47□□□□□ -1.53
TARDBP-218ENST00000617172 LINC00308Q8TCZ7 52 aa5.47□□□□□ -1.53
TARDBP-218ENST00000617172 ZNF815PA8K554 130 aa5.46□□□□□ -1.54
TARDBP-218ENST00000617172 SLC25A34Q6PIV7 304 aa5.46□□□□□ -1.54
TARDBP-218ENST00000617172 LITAFQ99732 161 aa5.46□□□□□ -1.54
TARDBP-218ENST00000617172 SPANXDQ9BXN6 97 aa5.46□□□□□ -1.54
TARDBP-218ENST00000617172 DHRS4-AS1Q9P1J3 65 aa5.46□□□□□ -1.54
TARDBP-218ENST00000617172 C9orf153Q5TBE3 101 aa5.45□□□□□ -1.54
TARDBP-218ENST00000617172 Q8N377 158 aa5.45□□□□□ -1.54
TARDBP-218ENST00000617172 COPS9Q8WXC6 57 aa5.45□□□□□ -1.54
TARDBP-218ENST00000617172 C3orf79P0CE67 100 aa5.44□□□□□ -1.54
TARDBP-218ENST00000617172 COA6Q5JTJ3 125 aaKnown RBP5.44□□□□□ -1.54
TARDBP-218ENST00000617172 SPRR1BP22528 89 aa5.43□□□□□ -1.54
TARDBP-218ENST00000617172 AKR1D1P51857 326 aa5.43□□□□□ -1.54
TARDBP-218ENST00000617172 ASB16-AS1Q495Z4 193 aa5.43□□□□□ -1.54
TARDBP-218ENST00000617172 ST20-AS1Q8NBB2 130 aa5.43□□□□□ -1.54
TARDBP-218ENST00000617172 C20orf202A1L168 122 aa5.42□□□□□ -1.54
TARDBP-218ENST00000617172 SEC61BP60468 96 aaKnown RBP5.42□□□□□ -1.54
TARDBP-218ENST00000617172 KRTDAPP60985 99 aa5.42□□□□□ -1.54
TARDBP-218ENST00000617172 SCGB1D4Q6XE38 83 aa5.42□□□□□ -1.54
TARDBP-218ENST00000617172 LAMTOR3Q9UHA4 124 aa5.42□□□□□ -1.54
TARDBP-218ENST00000617172 TRBV7-6A0A0J9YX20 115 aa5.41□□□□□ -1.54
TARDBP-218ENST00000617172 LOC100996750A0A140TA64 210 aa5.41□□□□□ -1.54
TARDBP-218ENST00000617172 IFITM1P13164 125 aa5.41□□□□□ -1.54
TARDBP-218ENST00000617172 COX7BP24311 80 aa5.41□□□□□ -1.54
TARDBP-218ENST00000617172 ELOF1P60002 83 aaKnown RBP5.41□□□□□ -1.54
TARDBP-218ENST00000617172 Q6ZVH6 145 aa5.41□□□□□ -1.54
TARDBP-218ENST00000617172 KRTAP4-6Q9BYQ5 205 aa5.41□□□□□ -1.54
TARDBP-218ENST00000617172 C6orf99Q4VX62 202 aa5.4□□□□□ -1.54
TARDBP-218ENST00000617172 LIMD2Q9BT23 127 aa5.4□□□□□ -1.54
TARDBP-218ENST00000617172 TTTY13Q9BZ97 58 aa5.4□□□□□ -1.54
TARDBP-218ENST00000617172 TAL2Q16559 108 aa5.39□□□□□ -1.55
TARDBP-218ENST00000617172 TEX49A0A1B0GTD5 131 aa5.38□□□□□ -1.55
TARDBP-218ENST00000617172 A0A1B0GWB2 263 aa5.38□□□□□ -1.55
TARDBP-218ENST00000617172 A4D1N5 150 aa5.38□□□□□ -1.55
TARDBP-218ENST00000617172 SNRPEP62304 92 aaKnown RBP5.38□□□□□ -1.55
TARDBP-218ENST00000617172 A6NDN8 102 aa5.37□□□□□ -1.55
TARDBP-218ENST00000617172 CD164Q04900 197 aa5.37□□□□□ -1.55
TARDBP-218ENST00000617172 XP32Q5T750 250 aa5.37□□□□□ -1.55
TARDBP-218ENST00000617172 PRO1933Q9H354 126 aa5.37□□□□□ -1.55
TARDBP-218ENST00000617172 ANKRD39Q53RE8 183 aa5.36□□□□□ -1.55
TARDBP-218ENST00000617172 DEFB105AQ8NG35 78 aa5.36□□□□□ -1.55
TARDBP-218ENST00000617172 TRAV13-2A0A0B4J235 113 aa5.35□□□□□ -1.55
TARDBP-218ENST00000617172 MUSTN1Q8IVN3 82 aa5.35□□□□□ -1.55
TARDBP-218ENST00000617172 NHP2Q9NX24 153 aaKnown RBP5.35□□□□□ -1.55
TARDBP-218ENST00000617172 FAT4Q6V0I7 4981 aa5.35□□□□□ -1.55
TARDBP-218ENST00000617172 LINC01547P58512 204 aaPredicted RBP5.34□□□□□ -1.55
TARDBP-218ENST00000617172 Q1RN00 199 aa5.34□□□□□ -1.55
TARDBP-218ENST00000617172 HRCT1Q6UXD1 115 aa5.34□□□□□ -1.55
TARDBP-218ENST00000617172 PCP2Q8IVA1 136 aa5.34□□□□□ -1.55
TARDBP-218ENST00000617172 ATOH7Q8N100 152 aa5.34□□□□□ -1.55
TARDBP-218ENST00000617172 IGLV5-48A0A075B6I7 105 aa5.33□□□□□ -1.56
TARDBP-218ENST00000617172 H7C2G1 150 aa5.33□□□□□ -1.56
TARDBP-218ENST00000617172 Q5XG85 94 aa5.33□□□□□ -1.56
TARDBP-218ENST00000617172 KRTAP9-2Q9BYQ4 174 aa5.33□□□□□ -1.56
TARDBP-218ENST00000617172 HSBP1L1C9JCN9 74 aa5.32□□□□□ -1.56
TARDBP-218ENST00000617172 VAMP3Q15836 100 aa5.32□□□□□ -1.56
TARDBP-218ENST00000617172 S100A2P29034 98 aa5.31□□□□□ -1.56
TARDBP-218ENST00000617172 SMIM29Q86T20 159 aa5.31□□□□□ -1.56
TARDBP-218ENST00000617172 SMIM11BQ8TCY0 68 aa5.31□□□□□ -1.56
TARDBP-218ENST00000617172 MUC17Q685J3 4493 aa5.31□□□□□ -1.56
TARDBP-218ENST00000617172 KRTAP4-1Q9BYQ7 146 aa5.3□□□□□ -1.56
TARDBP-218ENST00000617172 F8WEM9 126 aa5.28□□□□□ -1.56
TARDBP-218ENST00000617172 TCL1BO95988 128 aa5.28□□□□□ -1.56
TARDBP-218ENST00000617172 HIST3H2BBQ8N257 126 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms