RNA–Protein interactions for RNA: ENST00000613795.4

CLCN3-211, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,874 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-211ENST00000613795 PTPRQQ9UMZ3 2332 aa4.45□□□□□ -1.7
CLCN3-211ENST00000613795 FAM168BA1KXE4 195 aa4.45□□□□□ -1.7
CLCN3-211ENST00000613795 CNBPP62633 177 aaKnown RBP4.44□□□□□ -1.7
CLCN3-211ENST00000613795 DMAC1Q96GE9 116 aa4.43□□□□□ -1.7
CLCN3-211ENST00000613795 MUC4Q99102 2169 aa4.43□□□□□ -1.7
CLCN3-211ENST00000613795 K7EIL1 84 aa4.43□□□□□ -1.7
CLCN3-211ENST00000613795 KRTAP10-11P60412 298 aa4.43□□□□□ -1.7
CLCN3-211ENST00000613795 LINC00304Q8N9R0 145 aa4.43□□□□□ -1.7
CLCN3-211ENST00000613795 APLNQ9ULZ1 77 aa4.43□□□□□ -1.7
CLCN3-211ENST00000613795 A0A087WTM6 91 aa4.41□□□□□ -1.7
CLCN3-211ENST00000613795 CHTF8P0CG12 524 aa4.41□□□□□ -1.7
CLCN3-211ENST00000613795 CSAG1Q6PB30 78 aa4.41□□□□□ -1.7
CLCN3-211ENST00000613795 FAM208BQ5VWN6 2430 aa4.41□□□□□ -1.7
CLCN3-211ENST00000613795 GIG44P09565 113 aaPredicted RBP4.4□□□□□ -1.71
CLCN3-211ENST00000613795 IGLV7-43P04211 117 aa4.39□□□□□ -1.71
CLCN3-211ENST00000613795 SPG11Q96JI7 2443 aa4.39□□□□□ -1.71
CLCN3-211ENST00000613795 SPINK7P58062 85 aa4.39□□□□□ -1.71
CLCN3-211ENST00000613795 A0A0G2JQZ4 141 aa4.38□□□□□ -1.71
CLCN3-211ENST00000613795 A0A1W2PNN7 141 aa4.38□□□□□ -1.71
CLCN3-211ENST00000613795 HRES1P13985 223 aa4.38□□□□□ -1.71
CLCN3-211ENST00000613795 KRTAP10-3P60369 221 aa4.37□□□□□ -1.71
CLCN3-211ENST00000613795 A0A1B0GU33 70 aa4.36□□□□□ -1.71
CLCN3-211ENST00000613795 KRTAP1-3Q8IUG1 177 aa4.35□□□□□ -1.71
CLCN3-211ENST00000613795 MMP24-AS1A0A0U1RRL7 71 aa4.35□□□□□ -1.71
CLCN3-211ENST00000613795 ATRXP46100 2492 aa4.34□□□□□ -1.71
CLCN3-211ENST00000613795 A6NN06 94 aa4.34□□□□□ -1.71
CLCN3-211ENST00000613795 ACACBO00763 2458 aa4.33□□□□□ -1.72
CLCN3-211ENST00000613795 KRTAP1-1Q07627 177 aa4.32□□□□□ -1.72
CLCN3-211ENST00000613795 PTPN13Q12923 2485 aa4.32□□□□□ -1.72
CLCN3-211ENST00000613795 ZCCHC13Q8WW36 166 aaKnown RBP4.31□□□□□ -1.72
CLCN3-211ENST00000613795 PSORS1C2Q9UIG4 136 aa4.31□□□□□ -1.72
CLCN3-211ENST00000613795 NAV2Q8IVL1 2488 aa4.31□□□□□ -1.72
CLCN3-211ENST00000613795 COX6B2Q6YFQ2 88 aa4.31□□□□□ -1.72
CLCN3-211ENST00000613795 Q8N1X5 172 aa4.3□□□□□ -1.72
CLCN3-211ENST00000613795 A0A0D9SG42 100 aa4.29□□□□□ -1.72
CLCN3-211ENST00000613795 SPRR1AP35321 89 aa4.29□□□□□ -1.72
CLCN3-211ENST00000613795 CUL9Q8IWT3 2517 aa4.29□□□□□ -1.72
CLCN3-211ENST00000613795 A0A087X002 238 aa4.29□□□□□ -1.72
CLCN3-211ENST00000613795 LINC00472Q9H8W2 130 aa4.28□□□□□ -1.72
CLCN3-211ENST00000613795 CAMK2N1Q7Z7J9 78 aa4.27□□□□□ -1.73
CLCN3-211ENST00000613795 SPATA8Q6RVD6 105 aa4.26□□□□□ -1.73
CLCN3-211ENST00000613795 MYO9AB2RTY4 2548 aa4.26□□□□□ -1.73
CLCN3-211ENST00000613795 Q8NDZ9 215 aa4.26□□□□□ -1.73
CLCN3-211ENST00000613795 SPRR1BP22528 89 aa4.26□□□□□ -1.73
CLCN3-211ENST00000613795 LCE6AA0A183 80 aa4.26□□□□□ -1.73
CLCN3-211ENST00000613795 ROMO1P60602 79 aa4.26□□□□□ -1.73
CLCN3-211ENST00000613795 HIVEP3Q5T1R4 2406 aa4.25□□□□□ -1.73
CLCN3-211ENST00000613795 Q6ZR54 194 aa4.24□□□□□ -1.73
CLCN3-211ENST00000613795 PLAC8Q9NZF1 115 aa4.24□□□□□ -1.73
CLCN3-211ENST00000613795 ABCA2Q9BZC7 2435 aa4.24□□□□□ -1.73
CLCN3-211ENST00000613795 C9orf92A6NGG3 77 aa4.24□□□□□ -1.73
CLCN3-211ENST00000613795 CACNA1AO00555 2505 aa4.23□□□□□ -1.73
CLCN3-211ENST00000613795 LINC00483Q53H64 154 aa4.23□□□□□ -1.73
CLCN3-211ENST00000613795 FN1P02751 2386 aaKnown RBP4.23□□□□□ -1.73
CLCN3-211ENST00000613795 Q5W150 140 aa4.23□□□□□ -1.73
CLCN3-211ENST00000613795 PIEZO1Q92508 2521 aa4.23□□□□□ -1.73
CLCN3-211ENST00000613795 ZNF462Q96JM2 2506 aa4.23□□□□□ -1.73
CLCN3-211ENST00000613795 TTC28Q96AY4 2481 aa4.22□□□□□ -1.73
CLCN3-211ENST00000613795 KRTAP29-1A8MX34 341 aaPredicted RBP4.22□□□□□ -1.73
CLCN3-211ENST00000613795 CASC10Q5T4H9 136 aa4.22□□□□□ -1.73
CLCN3-211ENST00000613795 SONP18583 2426 aaKnown RBP4.21□□□□□ -1.73
CLCN3-211ENST00000613795 KRTAP25-1Q3LHN0 102 aa4.21□□□□□ -1.74
CLCN3-211ENST00000613795 ANAPC11Q9NYG5 84 aa4.21□□□□□ -1.74
CLCN3-211ENST00000613795 CR1P17927 2039 aa4.2□□□□□ -1.74
CLCN3-211ENST00000613795 RPL37P61927 97 aaKnown RBP4.2□□□□□ -1.74
CLCN3-211ENST00000613795 Q6ZSA8 131 aa4.2□□□□□ -1.74
CLCN3-211ENST00000613795 H1FX-AS1Q4G0G2 97 aa4.18□□□□□ -1.74
CLCN3-211ENST00000613795 KRTAP26-1Q6PEX3 210 aa4.18□□□□□ -1.74
CLCN3-211ENST00000613795 SMR3BP02814 79 aaPredicted RBP4.18□□□□□ -1.74
CLCN3-211ENST00000613795 PIEZO2Q9H5I5 2752 aa4.16□□□□□ -1.74
CLCN3-211ENST00000613795 TLN1Q9Y490 2541 aaKnown RBP4.15□□□□□ -1.75
CLCN3-211ENST00000613795 CCDC168Q8NDH2 2452 aa4.15□□□□□ -1.75
CLCN3-211ENST00000613795 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.15□□□□□ -1.75
CLCN3-211ENST00000613795 MYO18BQ8IUG5 2567 aa4.13□□□□□ -1.75
CLCN3-211ENST00000613795 IGF2RP11717 2491 aa4.13□□□□□ -1.75
CLCN3-211ENST00000613795 ADM2Q7Z4H4 148 aa4.13□□□□□ -1.75
CLCN3-211ENST00000613795 BDP1A6H8Y1 2624 aa4.12□□□□□ -1.75
CLCN3-211ENST00000613795 NCOR2Q9Y618 2525 aa4.12□□□□□ -1.75
CLCN3-211ENST00000613795 KRTAP4-16G5E9R7 235 aaPredicted RBP4.12□□□□□ -1.75
CLCN3-211ENST00000613795 S4R3F8 94 aa4.12□□□□□ -1.75
CLCN3-211ENST00000613795 NOTCH2Q04721 2471 aa4.1□□□□□ -1.75
CLCN3-211ENST00000613795 USP9XQ93008 2570 aaPredicted RBP4.1□□□□□ -1.75
CLCN3-211ENST00000613795 A8MU10 97 aa4.1□□□□□ -1.75
CLCN3-211ENST00000613795 TLN2Q9Y4G6 2542 aa4.09□□□□□ -1.75
CLCN3-211ENST00000613795 LRRK2Q5S007 2527 aa4.09□□□□□ -1.75
CLCN3-211ENST00000613795 NDUFAF8A1L188 74 aa4.08□□□□□ -1.76
CLCN3-211ENST00000613795 PKD1L2Q7Z442 2459 aa4.08□□□□□ -1.76
CLCN3-211ENST00000613795 ABCA12Q86UK0 2595 aa4.07□□□□□ -1.76
CLCN3-211ENST00000613795 PANO1I0J062 215 aa4.07□□□□□ -1.76
CLCN3-211ENST00000613795 RPS29P62273 56 aaKnown RBP4.07□□□□□ -1.76
CLCN3-211ENST00000613795 DOPEY1Q5JWR5 2465 aa4.06□□□□□ -1.76
CLCN3-211ENST00000613795 WDR87Q6ZQQ6 2873 aa4.03□□□□□ -1.76
CLCN3-211ENST00000613795 USP9YO00507 2555 aaPredicted RBP4.02□□□□□ -1.77
CLCN3-211ENST00000613795 ANKRD17O75179 2603 aaKnown RBP4.01□□□□□ -1.77
CLCN3-211ENST00000613795 Q5VSD8 79 aa4.01□□□□□ -1.77
CLCN3-211ENST00000613795 F8P00451 2351 aa4.01□□□□□ -1.77
CLCN3-211ENST00000613795 M0R2T5 61 aa4□□□□□ -1.77
CLCN3-211ENST00000613795 A8MUU9 505 aa4□□□□□ -1.77
CLCN3-211ENST00000613795 R4GN34 69 aa4□□□□□ -1.77
CLCN3-211ENST00000613795 SETD2Q9BYW2 2564 aaPredicted RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms