RNA–Protein interactions for RNA: ENST00000610401.4

SSBP3-216, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 3,168 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-216ENST00000610401 ESRGQ1W209 222 aa13.47□□□□□ -0.25
SSBP3-216ENST00000610401 A0A0G2JQZ4 141 aa13.46□□□□□ -0.25
SSBP3-216ENST00000610401 A0A1W2PNN7 141 aa13.46□□□□□ -0.25
SSBP3-216ENST00000610401 NREPQ16612 68 aa13.46□□□□□ -0.25
SSBP3-216ENST00000610401 FAM168BA1KXE4 195 aa13.46□□□□□ -0.25
SSBP3-216ENST00000610401 C15orf56Q8N910 161 aa13.46□□□□□ -0.25
SSBP3-216ENST00000610401 KMT2BQ9UMN6 2715 aaPredicted RBP13.46□□□□□ -0.25
SSBP3-216ENST00000610401 PRB2P02812 416 aaPredicted RBP13.45□□□□□ -0.26
SSBP3-216ENST00000610401 SERTAD4-AS1Q5TG53 156 aa13.45□□□□□ -0.26
SSBP3-216ENST00000610401 NKAPP1Q8N9T2 125 aa13.45□□□□□ -0.26
SSBP3-216ENST00000610401 TRBV7-4A0A0J9YYF1 115 aa13.44□□□□□ -0.26
SSBP3-216ENST00000610401 LINC00474Q9P2X8 69 aa13.44□□□□□ -0.26
SSBP3-216ENST00000610401 J3QKU1 62 aa13.44□□□□□ -0.26
SSBP3-216ENST00000610401 M0R378 163 aa13.44□□□□□ -0.26
SSBP3-216ENST00000610401 NDUFC2-KCTD14E9PQ53 114 aa13.43□□□□□ -0.26
SSBP3-216ENST00000610401 TENM2Q9NT68 2774 aa13.41□□□□□ -0.26
SSBP3-216ENST00000610401 ST20-AS1Q8NBB2 130 aa13.4□□□□□ -0.26
SSBP3-216ENST00000610401 LINC00528Q8N1L1 170 aa13.4□□□□□ -0.26
SSBP3-216ENST00000610401 MPLKIPQ8TAP9 179 aa13.39□□□□□ -0.27
SSBP3-216ENST00000610401 CASC10Q5T4H9 136 aa13.39□□□□□ -0.27
SSBP3-216ENST00000610401 MGAM2Q2M2H8 2515 aa13.39□□□□□ -0.27
SSBP3-216ENST00000610401 EGFEM1PQ0D2K5 195 aa13.38□□□□□ -0.27
SSBP3-216ENST00000610401 FAM30AQ9NZY2 134 aa13.38□□□□□ -0.27
SSBP3-216ENST00000610401 LRCOL1A6NCL2 159 aa13.38□□□□□ -0.27
SSBP3-216ENST00000610401 CXCL6P80162 114 aa13.38□□□□□ -0.27
SSBP3-216ENST00000610401 SYCNQ0VAF6 134 aa13.38□□□□□ -0.27
SSBP3-216ENST00000610401 PDE6GP18545 87 aa13.38□□□□□ -0.27
SSBP3-216ENST00000610401 GVQW2A0A096LPI5 108 aaPredicted RBP13.37□□□□□ -0.27
SSBP3-216ENST00000610401 DEFB116Q30KQ4 102 aa13.37□□□□□ -0.27
SSBP3-216ENST00000610401 C7orf33Q8WU49 177 aa13.36□□□□□ -0.27
SSBP3-216ENST00000610401 COL7A1Q02388 2944 aa13.35□□□□□ -0.27
SSBP3-216ENST00000610401 TMEM254Q8TBM7 123 aa13.35□□□□□ -0.27
SSBP3-216ENST00000610401 HIGD2AQ9BW72 106 aa13.35□□□□□ -0.27
SSBP3-216ENST00000610401 DEFB131BA0A096LNP1 70 aa13.34□□□□□ -0.27
SSBP3-216ENST00000610401 KRTAP10-11P60412 298 aa13.33□□□□□ -0.28
SSBP3-216ENST00000610401 KRTAP26-1Q6PEX3 210 aa13.33□□□□□ -0.28
SSBP3-216ENST00000610401 Q8N377 158 aa13.33□□□□□ -0.28
SSBP3-216ENST00000610401 PKIGQ9Y2B9 76 aa13.33□□□□□ -0.28
SSBP3-216ENST00000610401 MRAPQ8TCY5 172 aa13.33□□□□□ -0.28
SSBP3-216ENST00000610401 KLKP1Q107X0 134 aa13.32□□□□□ -0.28
SSBP3-216ENST00000610401 PRR4Q16378 134 aa13.32□□□□□ -0.28
SSBP3-216ENST00000610401 IGKV4-1P06312 121 aa13.31□□□□□ -0.28
SSBP3-216ENST00000610401 LINC00336Q6ZUF6 198 aa13.3□□□□□ -0.28
SSBP3-216ENST00000610401 SERP1Q9Y6X1 66 aa13.3□□□□□ -0.28
SSBP3-216ENST00000610401 TRBV7-6A0A0J9YX20 115 aa13.29□□□□□ -0.28
SSBP3-216ENST00000610401 UBE2BP63146 152 aa13.29□□□□□ -0.28
SSBP3-216ENST00000610401 SMIM29Q86T20 159 aa13.28□□□□□ -0.28
SSBP3-216ENST00000610401 A0A0U1RQV1 116 aa13.28□□□□□ -0.28
SSBP3-216ENST00000610401 LYSTQ99698 3801 aa13.28□□□□□ -0.28
SSBP3-216ENST00000610401 ETDCA0A1B0GVM5 59 aa13.27□□□□□ -0.28
SSBP3-216ENST00000610401 ERC2-IT1O76042 136 aa13.27□□□□□ -0.28
SSBP3-216ENST00000610401 FAM229BQ4G0N7 80 aa13.27□□□□□ -0.28
SSBP3-216ENST00000610401 STAB2Q8WWQ8 2551 aa13.26□□□□□ -0.29
SSBP3-216ENST00000610401 FP248Q71RG6 208 aaPredicted RBP13.26□□□□□ -0.29
SSBP3-216ENST00000610401 C11orf45Q8TAV5 145 aa13.26□□□□□ -0.29
SSBP3-216ENST00000610401 IGKV2-24A0A0C4DH68 120 aa13.25□□□□□ -0.29
SSBP3-216ENST00000610401 Q9BRP9 147 aa13.25□□□□□ -0.29
SSBP3-216ENST00000610401 C1orf137Q5JT78 98 aa13.23□□□□□ -0.29
SSBP3-216ENST00000610401 FUSP35637 526 aaKnown RBP eCLIP13.23□□□□□ -0.292e-6■■■□□ 16.5
SSBP3-216ENST00000610401 A0A1W2PNM2 257 aa13.22□□□□□ -0.29
SSBP3-216ENST00000610401 BRK1Q8WUW1 75 aa13.19□□□□□ -0.3
SSBP3-216ENST00000610401 H3BQ85 93 aa13.18□□□□□ -0.3
SSBP3-216ENST00000610401 PRYO14603 147 aa13.18□□□□□ -0.3
SSBP3-216ENST00000610401 A0A096LNI7 61 aa13.17□□□□□ -0.3
SSBP3-216ENST00000610401 DNAH10Q8IVF4 4471 aa13.17□□□□□ -0.3
SSBP3-216ENST00000610401 KCNQ1DNQ9H478 68 aa13.17□□□□□ -0.3
SSBP3-216ENST00000610401 PRLHP81277 87 aa13.16□□□□□ -0.3
SSBP3-216ENST00000610401 OCR1Q9BZK8 76 aa13.16□□□□□ -0.3
SSBP3-216ENST00000610401 K7EQZ3 153 aa13.16□□□□□ -0.3
SSBP3-216ENST00000610401 Q6ZRX8 168 aa13.16□□□□□ -0.3
SSBP3-216ENST00000610401 EPM2AB3EWF7 344 aa13.15□□□□□ -0.3
SSBP3-216ENST00000610401 LINC01556Q5JQF7 62 aa13.15□□□□□ -0.3
SSBP3-216ENST00000610401 SMIM26A0A096LP01 95 aa13.14□□□□□ -0.31
SSBP3-216ENST00000610401 WFDC13Q8IUB5 93 aa13.14□□□□□ -0.31
SSBP3-216ENST00000610401 KRTAP7-1Q8IUC3 87 aa13.13□□□□□ -0.31
SSBP3-216ENST00000610401 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.12□□□□□ -0.31
SSBP3-216ENST00000610401 LINC00588Q9Y4M8 146 aa13.12□□□□□ -0.31
SSBP3-216ENST00000610401 BCE1O60756 84 aa13.11□□□□□ -0.31
SSBP3-216ENST00000610401 RPL37AP61513 92 aaKnown RBP13.1□□□□□ -0.31
SSBP3-216ENST00000610401 IGLV1-50A0A075B6I6 118 aa13.09□□□□□ -0.31
SSBP3-216ENST00000610401 MRPL55Q7Z7F7 128 aaKnown RBP13.08□□□□□ -0.32
SSBP3-216ENST00000610401 NDUFC1O43677 76 aa13.07□□□□□ -0.32
SSBP3-216ENST00000610401 DHRS4-AS1Q9P1J3 65 aa13.06□□□□□ -0.32
SSBP3-216ENST00000610401 IGLV5-48A0A075B6I7 105 aa13.06□□□□□ -0.32
SSBP3-216ENST00000610401 DSCR10P59022 87 aa13.04□□□□□ -0.32
SSBP3-216ENST00000610401 Q8NBF4 154 aa13.04□□□□□ -0.32
SSBP3-216ENST00000610401 LINC00476Q8WZB0 136 aa13.04□□□□□ -0.32
SSBP3-216ENST00000610401 A0A087WSZ3 146 aa13.03□□□□□ -0.32
SSBP3-216ENST00000610401 H3BNG1 76 aa13.02□□□□□ -0.33
SSBP3-216ENST00000610401 CHTF8P0CG12 524 aa13.01□□□□□ -0.33
SSBP3-216ENST00000610401 PSCAO43653 123 aa12.99□□□□□ -0.33
SSBP3-216ENST00000610401 REG3GQ6UW15 175 aa12.99□□□□□ -0.33
SSBP3-216ENST00000610401 KRTAP4-16G5E9R7 235 aaPredicted RBP12.99□□□□□ -0.33
SSBP3-216ENST00000610401 DNAH10OSP0CZ25 163 aa12.99□□□□□ -0.33
SSBP3-216ENST00000610401 KRTAP24-1Q3LI83 254 aa12.98□□□□□ -0.33
SSBP3-216ENST00000610401 PSPHP1O15172 72 aa12.97□□□□□ -0.33
SSBP3-216ENST00000610401 PRO0628Q9UI54 55 aa12.96□□□□□ -0.33
SSBP3-216ENST00000610401 IGFL1Q6UW32 110 aa12.95□□□□□ -0.34
SSBP3-216ENST00000610401 TNP2Q05952 138 aa12.93□□□□□ -0.34
SSBP3-216ENST00000610401 C1orf64Q8NEQ6 169 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms