RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 KRTAP13-2Q52LG2 175 aa6.78□□□□□ -1.32
CCDC12-209ENST00000604164 SOSTDC1Q6X4U4 206 aa6.78□□□□□ -1.32
CCDC12-209ENST00000604164 Q6ZRX8 168 aa6.78□□□□□ -1.32
CCDC12-209ENST00000604164 LINC00518Q8N0U6 118 aa6.78□□□□□ -1.32
CCDC12-209ENST00000604164 SMCR5Q8TEV8 140 aa6.78□□□□□ -1.32
CCDC12-209ENST00000604164 LITAFQ99732 161 aa6.78□□□□□ -1.32
CCDC12-209ENST00000604164 ZNF73O43830 326 aaPredicted RBP6.77□□□□□ -1.33
CCDC12-209ENST00000604164 PRR4Q16378 134 aa6.77□□□□□ -1.33
CCDC12-209ENST00000604164 Q6ZVH6 145 aa6.77□□□□□ -1.33
CCDC12-209ENST00000604164 SPANXDQ9BXN6 97 aa6.77□□□□□ -1.33
CCDC12-209ENST00000604164 HSBP1L1C9JCN9 74 aa6.76□□□□□ -1.33
CCDC12-209ENST00000604164 IFITM1P13164 125 aa6.76□□□□□ -1.33
CCDC12-209ENST00000604164 SPAG11AQ6PDA7 123 aa6.76□□□□□ -1.33
CCDC12-209ENST00000604164 HIST3H2BBQ8N257 126 aa6.76□□□□□ -1.33
CCDC12-209ENST00000604164 OR13C6PQ8NH95 151 aa6.76□□□□□ -1.33
CCDC12-209ENST00000604164 PPDPFQ9H3Y8 114 aa6.76□□□□□ -1.33
CCDC12-209ENST00000604164 C4orf48Q5BLP8 95 aa6.75□□□□□ -1.33
CCDC12-209ENST00000604164 ATOH7Q8N100 152 aa6.75□□□□□ -1.33
CCDC12-209ENST00000604164 HIST1H2BLQ99880 126 aa6.75□□□□□ -1.33
CCDC12-209ENST00000604164 TTTY13Q9BZ97 58 aa6.75□□□□□ -1.33
CCDC12-209ENST00000604164 C5orf52A6NGY3 159 aa6.74□□□□□ -1.33
CCDC12-209ENST00000604164 EIF4EBP3O60516 100 aaPredicted RBP6.74□□□□□ -1.33
CCDC12-209ENST00000604164 LINC00483Q53H64 154 aa6.74□□□□□ -1.33
CCDC12-209ENST00000604164 ANKRD39Q53RE8 183 aa6.74□□□□□ -1.33
CCDC12-209ENST00000604164 GAGE2AQ6NT46 116 aa6.73□□□□□ -1.33
CCDC12-209ENST00000604164 C3orf22Q8N5N4 141 aa6.72□□□□□ -1.33
CCDC12-209ENST00000604164 Q9BRP9 147 aa6.72□□□□□ -1.33
CCDC12-209ENST00000604164 DHRS4-AS1Q9P1J3 65 aa6.72□□□□□ -1.33
CCDC12-209ENST00000604164 ERC2-IT1O76042 136 aa6.7□□□□□ -1.34
CCDC12-209ENST00000604164 SLC25A34Q6PIV7 304 aa6.7□□□□□ -1.34
CCDC12-209ENST00000604164 PCP2Q8IVA1 136 aa6.7□□□□□ -1.34
CCDC12-209ENST00000604164 SSBP3-AS1Q7Z2R9 100 aa6.69□□□□□ -1.34
CCDC12-209ENST00000604164 Q8NBF4 154 aa6.69□□□□□ -1.34
CCDC12-209ENST00000604164 TRAV13-2A0A0B4J235 113 aa6.68□□□□□ -1.34
CCDC12-209ENST00000604164 TRBV7-6A0A0J9YX20 115 aa6.68□□□□□ -1.34
CCDC12-209ENST00000604164 SPINK1P00995 79 aa6.68□□□□□ -1.34
CCDC12-209ENST00000604164 COX7BP24311 80 aa6.68□□□□□ -1.34
CCDC12-209ENST00000604164 IGLV9-49A0A0B4J1Y8 123 aa6.67□□□□□ -1.34
CCDC12-209ENST00000604164 A6NDN8 102 aa6.67□□□□□ -1.34
CCDC12-209ENST00000604164 SCGB1D1O95968 90 aa6.67□□□□□ -1.34
CCDC12-209ENST00000604164 ELOF1P60002 83 aaKnown RBP6.67□□□□□ -1.34
CCDC12-209ENST00000604164 C6orf99Q4VX62 202 aa6.67□□□□□ -1.34
CCDC12-209ENST00000604164 MUSTN1Q8IVN3 82 aa6.67□□□□□ -1.34
CCDC12-209ENST00000604164 MOBPQ13875 183 aa6.66□□□□□ -1.34
CCDC12-209ENST00000604164 LRP2P98164 4655 aa6.65□□□□□ -1.34
CCDC12-209ENST00000604164 A0A1B0GWB2 263 aa6.65□□□□□ -1.34
CCDC12-209ENST00000604164 A4D1N5 150 aa6.65□□□□□ -1.34
CCDC12-209ENST00000604164 RPS29P62273 56 aaKnown RBP6.65□□□□□ -1.34
CCDC12-209ENST00000604164 C9orf153Q5TBE3 101 aa6.64□□□□□ -1.35
CCDC12-209ENST00000604164 FP248Q71RG6 208 aaPredicted RBP6.64□□□□□ -1.35
CCDC12-209ENST00000604164 RETNLBQ9BQ08 111 aa6.64□□□□□ -1.35
CCDC12-209ENST00000604164 IGLV7-46A0A075B6I9 117 aa6.63□□□□□ -1.35
CCDC12-209ENST00000604164 SPRR1BP22528 89 aa6.63□□□□□ -1.35
CCDC12-209ENST00000604164 UBR4Q5T4S7 5183 aa6.63□□□□□ -1.35
CCDC12-209ENST00000604164 NHP2Q9NX24 153 aaKnown RBP6.63□□□□□ -1.35
CCDC12-209ENST00000604164 LAMTOR3Q9UHA4 124 aa6.63□□□□□ -1.35
CCDC12-209ENST00000604164 VAMP3Q15836 100 aa6.62□□□□□ -1.35
CCDC12-209ENST00000604164 TAL2Q16559 108 aa6.62□□□□□ -1.35
CCDC12-209ENST00000604164 TPRXLQ17RH7 258 aa6.62□□□□□ -1.35
CCDC12-209ENST00000604164 ST20-AS1Q8NBB2 130 aa6.62□□□□□ -1.35
CCDC12-209ENST00000604164 TEX49A0A1B0GTD5 131 aa6.6□□□□□ -1.35
CCDC12-209ENST00000604164 SLC25A20O43772 301 aa6.6□□□□□ -1.35
CCDC12-209ENST00000604164 COX8AP10176 69 aa6.6□□□□□ -1.35
CCDC12-209ENST00000604164 HIST1H4GQ99525 98 aa6.6□□□□□ -1.35
CCDC12-209ENST00000604164 CDIP1Q9H305 208 aa6.6□□□□□ -1.35
CCDC12-209ENST00000604164 DLEU1O43261 78 aa6.59□□□□□ -1.35
CCDC12-209ENST00000604164 SMIM11BQ8TCY0 68 aa6.59□□□□□ -1.35
CCDC12-209ENST00000604164 DEFB105AQ8NG35 78 aa6.58□□□□□ -1.36
CCDC12-209ENST00000604164 Q8N377 158 aa6.56□□□□□ -1.36
CCDC12-209ENST00000604164 LIMD2Q9BT23 127 aa6.56□□□□□ -1.36
CCDC12-209ENST00000604164 VAMP8Q9BV40 100 aa6.56□□□□□ -1.36
CCDC12-209ENST00000604164 IGLV5-48A0A075B6I7 105 aa6.55□□□□□ -1.36
CCDC12-209ENST00000604164 SPATA45Q537H7 98 aa6.55□□□□□ -1.36
CCDC12-209ENST00000604164 PRO1933Q9H354 126 aa6.55□□□□□ -1.36
CCDC12-209ENST00000604164 CD164Q04900 197 aa6.54□□□□□ -1.36
CCDC12-209ENST00000604164 Q1RN00 199 aa6.54□□□□□ -1.36
CCDC12-209ENST00000604164 BVES-AS1Q5T3Y7 98 aa6.54□□□□□ -1.36
CCDC12-209ENST00000604164 HIGD1BQ9P298 99 aa6.54□□□□□ -1.36
CCDC12-209ENST00000604164 PAM16Q9Y3D7 125 aa6.54□□□□□ -1.36
CCDC12-209ENST00000604164 LPAP08519 4548 aa6.53□□□□□ -1.36
CCDC12-209ENST00000604164 A0A0U1RQV1 116 aa6.53□□□□□ -1.36
CCDC12-209ENST00000604164 SNCGO76070 127 aa6.53□□□□□ -1.36
CCDC12-209ENST00000604164 C14orf144Q96I85 54 aa6.53□□□□□ -1.36
CCDC12-209ENST00000604164 hADV29S1A0JD25 119 aa6.52□□□□□ -1.37
CCDC12-209ENST00000604164 F8WEM9 126 aa6.52□□□□□ -1.37
CCDC12-209ENST00000604164 LINC00575Q6W349 94 aa6.52□□□□□ -1.37
CCDC12-209ENST00000604164 H7C2G1 150 aa6.51□□□□□ -1.37
CCDC12-209ENST00000604164 RAB37Q96AX2 223 aa6.51□□□□□ -1.37
CCDC12-209ENST00000604164 C12orf57Q99622 126 aa6.51□□□□□ -1.37
CCDC12-209ENST00000604164 TMEM238LA0A1B0GVL6 79 aa6.5□□□□□ -1.37
CCDC12-209ENST00000604164 A6NJY4 79 aa6.5□□□□□ -1.37
CCDC12-209ENST00000604164 LINC01547P58512 204 aaPredicted RBP6.5□□□□□ -1.37
CCDC12-209ENST00000604164 KRTAP13-3Q3SY46 172 aa6.5□□□□□ -1.37
CCDC12-209ENST00000604164 HRCT1Q6UXD1 115 aa6.49□□□□□ -1.37
CCDC12-209ENST00000604164 SMIM29Q86T20 159 aa6.49□□□□□ -1.37
CCDC12-209ENST00000604164 PPDPFLQ8WWR9 84 aa6.49□□□□□ -1.37
CCDC12-209ENST00000604164 A0A0B4J2C4 111 aa6.48□□□□□ -1.37
CCDC12-209ENST00000604164 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.48□□□□□ -1.37
CCDC12-209ENST00000604164 Q6ZQY7 126 aa6.48□□□□□ -1.37
CCDC12-209ENST00000604164 CFC1BP0CG36 223 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms