RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 SPRR4Q96PI1 79 aa8.32□□□□□ -1.08
LIG1-218ENST00000599322 SPANXCQ9NY87 97 aa8.32□□□□□ -1.08
LIG1-218ENST00000599322 TRAV23DV6A0A075B6W5 121 aa8.31□□□□□ -1.08
LIG1-218ENST00000599322 S100A6P06703 90 aa8.31□□□□□ -1.08
LIG1-218ENST00000599322 LINC00308Q8TCZ7 52 aa8.31□□□□□ -1.08
LIG1-218ENST00000599322 B5MCH6 92 aa8.3□□□□□ -1.08
LIG1-218ENST00000599322 IGLV6-57P01721 117 aa8.3□□□□□ -1.08
LIG1-218ENST00000599322 SNRPEP62304 92 aaKnown RBP8.3□□□□□ -1.08
LIG1-218ENST00000599322 CTAG1AP78358 180 aa8.3□□□□□ -1.08
LIG1-218ENST00000599322 KRTAP13-2Q52LG2 175 aa8.3□□□□□ -1.08
LIG1-218ENST00000599322 LINC00518Q8N0U6 118 aa8.3□□□□□ -1.08
LIG1-218ENST00000599322 C5orf52A6NGY3 159 aa8.29□□□□□ -1.08
LIG1-218ENST00000599322 SPAG11AQ6PDA7 123 aa8.29□□□□□ -1.08
LIG1-218ENST00000599322 HSBP1L1C9JCN9 74 aa8.28□□□□□ -1.08
LIG1-218ENST00000599322 KRTAP4-16G5E9R7 235 aaPredicted RBP8.28□□□□□ -1.08
LIG1-218ENST00000599322 ZNF73O43830 326 aaPredicted RBP8.28□□□□□ -1.08
LIG1-218ENST00000599322 SOSTDC1Q6X4U4 206 aa8.28□□□□□ -1.08
LIG1-218ENST00000599322 Q6ZRX8 168 aa8.28□□□□□ -1.08
LIG1-218ENST00000599322 GAGE2AQ6NT46 116 aa8.27□□□□□ -1.09
LIG1-218ENST00000599322 PPDPFQ9H3Y8 114 aa8.27□□□□□ -1.09
LIG1-218ENST00000599322 Q6ZVH6 145 aa8.26□□□□□ -1.09
LIG1-218ENST00000599322 ATOH7Q8N100 152 aa8.26□□□□□ -1.09
LIG1-218ENST00000599322 SPANXDQ9BXN6 97 aa8.26□□□□□ -1.09
LIG1-218ENST00000599322 IFITM1P13164 125 aa8.25□□□□□ -1.09
LIG1-218ENST00000599322 C3orf22Q8N5N4 141 aa8.25□□□□□ -1.09
LIG1-218ENST00000599322 LITAFQ99732 161 aa8.25□□□□□ -1.09
LIG1-218ENST00000599322 TTTY13Q9BZ97 58 aa8.25□□□□□ -1.09
LIG1-218ENST00000599322 ANKRD39Q53RE8 183 aa8.23□□□□□ -1.09
LIG1-218ENST00000599322 HIST3H2BBQ8N257 126 aa8.23□□□□□ -1.09
LIG1-218ENST00000599322 EIF4EBP3O60516 100 aaPredicted RBP8.22□□□□□ -1.09
LIG1-218ENST00000599322 DHRS4-AS1Q9P1J3 65 aa8.22□□□□□ -1.09
LIG1-218ENST00000599322 A6NDN8 102 aa8.21□□□□□ -1.1
LIG1-218ENST00000599322 LINC00483Q53H64 154 aa8.21□□□□□ -1.1
LIG1-218ENST00000599322 SLC25A34Q6PIV7 304 aa8.21□□□□□ -1.1
LIG1-218ENST00000599322 SSBP3-AS1Q7Z2R9 100 aa8.21□□□□□ -1.1
LIG1-218ENST00000599322 HIST1H2BLQ99880 126 aa8.21□□□□□ -1.1
LIG1-218ENST00000599322 Q9BRP9 147 aa8.21□□□□□ -1.1
LIG1-218ENST00000599322 IGLV9-49A0A0B4J1Y8 123 aa8.2□□□□□ -1.1
LIG1-218ENST00000599322 ERC2-IT1O76042 136 aa8.2□□□□□ -1.1
LIG1-218ENST00000599322 Q8NBF4 154 aa8.2□□□□□ -1.1
LIG1-218ENST00000599322 SPINK1P00995 79 aa8.19□□□□□ -1.1
LIG1-218ENST00000599322 COX7BP24311 80 aa8.19□□□□□ -1.1
LIG1-218ENST00000599322 PCP2Q8IVA1 136 aa8.19□□□□□ -1.1
LIG1-218ENST00000599322 SMIM6P0DI80 62 aa8.18□□□□□ -1.1
LIG1-218ENST00000599322 MOBPQ13875 183 aa8.18□□□□□ -1.1
LIG1-218ENST00000599322 C9orf153Q5TBE3 101 aa8.18□□□□□ -1.1
LIG1-218ENST00000599322 TRAV13-2A0A0B4J235 113 aa8.17□□□□□ -1.1
LIG1-218ENST00000599322 SCGB1D1O95968 90 aa8.17□□□□□ -1.1
LIG1-218ENST00000599322 MUSTN1Q8IVN3 82 aa8.17□□□□□ -1.1
LIG1-218ENST00000599322 RETNLBQ9BQ08 111 aa8.17□□□□□ -1.1
LIG1-218ENST00000599322 IGLV7-46A0A075B6I9 117 aa8.16□□□□□ -1.1
LIG1-218ENST00000599322 C6orf99Q4VX62 202 aa8.16□□□□□ -1.1
LIG1-218ENST00000599322 TRBV7-6A0A0J9YX20 115 aa8.15□□□□□ -1.1
LIG1-218ENST00000599322 TAL2Q16559 108 aa8.15□□□□□ -1.1
LIG1-218ENST00000599322 LAMTOR3Q9UHA4 124 aa8.15□□□□□ -1.1
LIG1-218ENST00000599322 CDIP1Q9H305 208 aa8.14□□□□□ -1.11
LIG1-218ENST00000599322 A0A1B0GWB2 263 aa8.13□□□□□ -1.11
LIG1-218ENST00000599322 A4D1N5 150 aa8.13□□□□□ -1.11
LIG1-218ENST00000599322 ELOF1P60002 83 aaKnown RBP8.13□□□□□ -1.11
LIG1-218ENST00000599322 VAMP3Q15836 100 aa8.13□□□□□ -1.11
LIG1-218ENST00000599322 FP248Q71RG6 208 aaPredicted RBP8.13□□□□□ -1.11
LIG1-218ENST00000599322 NHP2Q9NX24 153 aaKnown RBP8.13□□□□□ -1.11
LIG1-218ENST00000599322 ST20-AS1Q8NBB2 130 aa8.12□□□□□ -1.11
LIG1-218ENST00000599322 SLC25A20O43772 301 aa8.1□□□□□ -1.11
LIG1-218ENST00000599322 RPS29P62273 56 aaKnown RBP8.1□□□□□ -1.11
LIG1-218ENST00000599322 TPRXLQ17RH7 258 aa8.1□□□□□ -1.11
LIG1-218ENST00000599322 DEFB105AQ8NG35 78 aa8.1□□□□□ -1.11
LIG1-218ENST00000599322 C12orf57Q99622 126 aa8.09□□□□□ -1.11
LIG1-218ENST00000599322 MUC2Q02817 5179 aa8.09□□□□□ -1.11
LIG1-218ENST00000599322 TEX49A0A1B0GTD5 131 aa8.08□□□□□ -1.12
LIG1-218ENST00000599322 SPRR1BP22528 89 aa8.08□□□□□ -1.12
LIG1-218ENST00000599322 HIST1H4GQ99525 98 aa8.08□□□□□ -1.12
LIG1-218ENST00000599322 LIMD2Q9BT23 127 aa8.06□□□□□ -1.12
LIG1-218ENST00000599322 A0A0U1RQV1 116 aa8.05□□□□□ -1.12
LIG1-218ENST00000599322 SMIM11BQ8TCY0 68 aa8.05□□□□□ -1.12
LIG1-218ENST00000599322 PRO1933Q9H354 126 aa8.05□□□□□ -1.12
LIG1-218ENST00000599322 COX8AP10176 69 aa8.04□□□□□ -1.12
LIG1-218ENST00000599322 PYY3Q5JQD4 70 aa8.04□□□□□ -1.12
LIG1-218ENST00000599322 Q1RN00 199 aa8.03□□□□□ -1.12
LIG1-218ENST00000599322 DLEU1O43261 78 aa8.02□□□□□ -1.13
LIG1-218ENST00000599322 Q8N377 158 aa8.02□□□□□ -1.13
LIG1-218ENST00000599322 VAMP8Q9BV40 100 aa8.02□□□□□ -1.13
LIG1-218ENST00000599322 F8WEM9 126 aa8.01□□□□□ -1.13
LIG1-218ENST00000599322 SNCGO76070 127 aa8.01□□□□□ -1.13
LIG1-218ENST00000599322 H7C2G1 150 aa8□□□□□ -1.13
LIG1-218ENST00000599322 SPATA45Q537H7 98 aa8□□□□□ -1.13
LIG1-218ENST00000599322 BVES-AS1Q5T3Y7 98 aa8□□□□□ -1.13
LIG1-218ENST00000599322 HRCT1Q6UXD1 115 aa8□□□□□ -1.13
LIG1-218ENST00000599322 PAM16Q9Y3D7 125 aa8□□□□□ -1.13
LIG1-218ENST00000599322 IGLV5-48A0A075B6I7 105 aa7.99□□□□□ -1.13
LIG1-218ENST00000599322 RAB37Q96AX2 223 aa7.99□□□□□ -1.13
LIG1-218ENST00000599322 C14orf144Q96I85 54 aa7.99□□□□□ -1.13
LIG1-218ENST00000599322 hADV29S1A0JD25 119 aa7.98□□□□□ -1.13
LIG1-218ENST00000599322 CD164Q04900 197 aa7.98□□□□□ -1.13
LIG1-218ENST00000599322 LINC00575Q6W349 94 aa7.97□□□□□ -1.13
LIG1-218ENST00000599322 FAT4Q6V0I7 4981 aa7.97□□□□□ -1.13
LIG1-218ENST00000599322 HIGD1BQ9P298 99 aa7.96□□□□□ -1.14
LIG1-218ENST00000599322 TMEM238LA0A1B0GVL6 79 aa7.95□□□□□ -1.14
LIG1-218ENST00000599322 A6NJY4 79 aa7.95□□□□□ -1.14
LIG1-218ENST00000599322 KRTAP13-3Q3SY46 172 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms