RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 Q9BRP9 147 aa6.05□□□□□ -1.44
CCDC9-203ENST00000596938 CBY1Q9Y3M2 126 aa6.05□□□□□ -1.44
CCDC9-203ENST00000596938 TRAV23DV6A0A075B6W5 121 aa6.04□□□□□ -1.44
CCDC9-203ENST00000596938 NPC2P61916 151 aa6.04□□□□□ -1.44
CCDC9-203ENST00000596938 JOSD1Q15040 202 aaPredicted RBP6.04□□□□□ -1.44
CCDC9-203ENST00000596938 C4orf48Q5BLP8 95 aa6.04□□□□□ -1.44
CCDC9-203ENST00000596938 RETNLBQ9BQ08 111 aa6.04□□□□□ -1.44
CCDC9-203ENST00000596938 PPDPFQ9H3Y8 114 aa6.04□□□□□ -1.44
CCDC9-203ENST00000596938 SPANXCQ9NY87 97 aa6.04□□□□□ -1.44
CCDC9-203ENST00000596938 ZNF815PA8K554 130 aa6.03□□□□□ -1.44
CCDC9-203ENST00000596938 ZNF73O43830 326 aaPredicted RBP6.03□□□□□ -1.44
CCDC9-203ENST00000596938 KRTDAPP60985 99 aa6.03□□□□□ -1.44
CCDC9-203ENST00000596938 GAGE2AQ6NT46 116 aa6.03□□□□□ -1.44
CCDC9-203ENST00000596938 IGLV7-46A0A075B6I9 117 aa6.02□□□□□ -1.45
CCDC9-203ENST00000596938 C5orf52A6NGY3 159 aa6.02□□□□□ -1.45
CCDC9-203ENST00000596938 HINT1P49773 126 aaPredicted RBP6.02□□□□□ -1.45
CCDC9-203ENST00000596938 TPRXLQ17RH7 258 aa6.02□□□□□ -1.45
CCDC9-203ENST00000596938 SSBP3-AS1Q7Z2R9 100 aa6.02□□□□□ -1.45
CCDC9-203ENST00000596938 Q8NBF4 154 aa6.02□□□□□ -1.45
CCDC9-203ENST00000596938 C20orf202A1L168 122 aa6.01□□□□□ -1.45
CCDC9-203ENST00000596938 SPINK1P00995 79 aa6.01□□□□□ -1.45
CCDC9-203ENST00000596938 AKR1D1P51857 326 aa6.01□□□□□ -1.45
CCDC9-203ENST00000596938 LINC00518Q8N0U6 118 aa6.01□□□□□ -1.45
CCDC9-203ENST00000596938 TTTY13Q9BZ97 58 aa6.01□□□□□ -1.45
CCDC9-203ENST00000596938 OR13C6PQ8NH95 151 aa6□□□□□ -1.45
CCDC9-203ENST00000596938 SPANXDQ9BXN6 97 aa6□□□□□ -1.45
CCDC9-203ENST00000596938 FP248Q71RG6 208 aaPredicted RBP5.99□□□□□ -1.45
CCDC9-203ENST00000596938 IGLV9-49A0A0B4J1Y8 123 aa5.98□□□□□ -1.45
CCDC9-203ENST00000596938 RPS29P62273 56 aaKnown RBP5.98□□□□□ -1.45
CCDC9-203ENST00000596938 MOBPQ13875 183 aa5.98□□□□□ -1.45
CCDC9-203ENST00000596938 ANKRD39Q53RE8 183 aa5.98□□□□□ -1.45
CCDC9-203ENST00000596938 Q6ZVH6 145 aa5.98□□□□□ -1.45
CCDC9-203ENST00000596938 COPS9Q8WXC6 57 aa5.98□□□□□ -1.45
CCDC9-203ENST00000596938 CDIP1Q9H305 208 aa5.98□□□□□ -1.45
CCDC9-203ENST00000596938 MUC17Q685J3 4493 aa5.98□□□□□ -1.45
CCDC9-203ENST00000596938 IFITM1P13164 125 aa5.97□□□□□ -1.45
CCDC9-203ENST00000596938 SNRPEP62304 92 aaKnown RBP5.97□□□□□ -1.45
CCDC9-203ENST00000596938 SCGB1D4Q6XE38 83 aa5.97□□□□□ -1.45
CCDC9-203ENST00000596938 DHRS4-AS1Q9P1J3 65 aa5.97□□□□□ -1.45
CCDC9-203ENST00000596938 SPRR1BP22528 89 aa5.96□□□□□ -1.46
CCDC9-203ENST00000596938 ST20-AS1Q8NBB2 130 aa5.96□□□□□ -1.46
CCDC9-203ENST00000596938 S100A1P23297 94 aa5.95□□□□□ -1.46
CCDC9-203ENST00000596938 ATOH7Q8N100 152 aa5.95□□□□□ -1.46
CCDC9-203ENST00000596938 TRBV7-6A0A0J9YX20 115 aa5.94□□□□□ -1.46
CCDC9-203ENST00000596938 COX7BP24311 80 aa5.94□□□□□ -1.46
CCDC9-203ENST00000596938 ELOF1P60002 83 aaKnown RBP5.94□□□□□ -1.46
CCDC9-203ENST00000596938 C6orf99Q4VX62 202 aa5.94□□□□□ -1.46
CCDC9-203ENST00000596938 SLC25A34Q6PIV7 304 aa5.94□□□□□ -1.46
CCDC9-203ENST00000596938 PCP2Q8IVA1 136 aa5.94□□□□□ -1.46
CCDC9-203ENST00000596938 HIST3H2BBQ8N257 126 aa5.94□□□□□ -1.46
CCDC9-203ENST00000596938 Q8N377 158 aa5.94□□□□□ -1.46
CCDC9-203ENST00000596938 SLC25A20O43772 301 aa5.93□□□□□ -1.46
CCDC9-203ENST00000596938 MUSTN1Q8IVN3 82 aa5.93□□□□□ -1.46
CCDC9-203ENST00000596938 HIST1H2BLQ99880 126 aa5.93□□□□□ -1.46
CCDC9-203ENST00000596938 A0A0U1RQV1 116 aa5.92□□□□□ -1.46
CCDC9-203ENST00000596938 S100A2P29034 98 aa5.92□□□□□ -1.46
CCDC9-203ENST00000596938 KRTAP13-3Q3SY46 172 aa5.92□□□□□ -1.46
CCDC9-203ENST00000596938 C9orf153Q5TBE3 101 aa5.92□□□□□ -1.46
CCDC9-203ENST00000596938 A6NDN8 102 aa5.91□□□□□ -1.46
CCDC9-203ENST00000596938 LAMTOR3Q9UHA4 124 aa5.91□□□□□ -1.46
CCDC9-203ENST00000596938 FAT4Q6V0I7 4981 aa5.91□□□□□ -1.46
CCDC9-203ENST00000596938 TRAV13-2A0A0B4J235 113 aa5.9□□□□□ -1.46
CCDC9-203ENST00000596938 A0A1B0GWB2 263 aa5.9□□□□□ -1.46
CCDC9-203ENST00000596938 TAL2Q16559 108 aa5.9□□□□□ -1.46
CCDC9-203ENST00000596938 TEX49A0A1B0GTD5 131 aa5.89□□□□□ -1.47
CCDC9-203ENST00000596938 A4D1N5 150 aa5.89□□□□□ -1.47
CCDC9-203ENST00000596938 HSBP1L1C9JCN9 74 aa5.89□□□□□ -1.47
CCDC9-203ENST00000596938 S100A6P06703 90 aa5.89□□□□□ -1.47
CCDC9-203ENST00000596938 DEFB105AQ8NG35 78 aa5.87□□□□□ -1.47
CCDC9-203ENST00000596938 IGLV5-48A0A075B6I7 105 aa5.86□□□□□ -1.47
CCDC9-203ENST00000596938 LINC01547P58512 204 aaPredicted RBP5.86□□□□□ -1.47
CCDC9-203ENST00000596938 CD164Q04900 197 aa5.86□□□□□ -1.47
CCDC9-203ENST00000596938 ASB16-AS1Q495Z4 193 aa5.86□□□□□ -1.47
CCDC9-203ENST00000596938 SMIM29Q86T20 159 aa5.86□□□□□ -1.47
CCDC9-203ENST00000596938 SMIM11BQ8TCY0 68 aa5.86□□□□□ -1.47
CCDC9-203ENST00000596938 LIMD2Q9BT23 127 aa5.85□□□□□ -1.47
CCDC9-203ENST00000596938 PRO1933Q9H354 126 aa5.85□□□□□ -1.47
CCDC9-203ENST00000596938 NHP2Q9NX24 153 aaKnown RBP5.85□□□□□ -1.47
CCDC9-203ENST00000596938 VAMP3Q15836 100 aa5.84□□□□□ -1.47
CCDC9-203ENST00000596938 Q1RN00 199 aa5.84□□□□□ -1.47
CCDC9-203ENST00000596938 SCGB1D1O95968 90 aa5.83□□□□□ -1.48
CCDC9-203ENST00000596938 SEC61BP60468 96 aaKnown RBP5.83□□□□□ -1.48
CCDC9-203ENST00000596938 HRCT1Q6UXD1 115 aa5.83□□□□□ -1.48
CCDC9-203ENST00000596938 XP32Q5T750 250 aa5.82□□□□□ -1.48
CCDC9-203ENST00000596938 Q5XG85 94 aa5.82□□□□□ -1.48
CCDC9-203ENST00000596938 H7C2G1 150 aa5.81□□□□□ -1.48
CCDC9-203ENST00000596938 LCE2AQ5TA79 106 aaPredicted RBP5.81□□□□□ -1.48
CCDC9-203ENST00000596938 LINC00575Q6W349 94 aa5.81□□□□□ -1.48
CCDC9-203ENST00000596938 DLEU1O43261 78 aa5.8□□□□□ -1.48
CCDC9-203ENST00000596938 COX8AP10176 69 aa5.8□□□□□ -1.48
CCDC9-203ENST00000596938 HIST1H4GQ99525 98 aa5.79□□□□□ -1.48
CCDC9-203ENST00000596938 hADV29S1A0JD25 119 aa5.78□□□□□ -1.48
CCDC9-203ENST00000596938 A0A0G2JQZ4 141 aa5.76□□□□□ -1.49
CCDC9-203ENST00000596938 BVES-AS1Q5T3Y7 98 aa5.76□□□□□ -1.49
CCDC9-203ENST00000596938 C1orf195Q5TG92 126 aa5.76□□□□□ -1.49
CCDC9-203ENST00000596938 Q6ZQY7 126 aa5.76□□□□□ -1.49
CCDC9-203ENST00000596938 KRTAP4-1Q9BYQ7 146 aa5.76□□□□□ -1.49
CCDC9-203ENST00000596938 F8WEM9 126 aa5.75□□□□□ -1.49
CCDC9-203ENST00000596938 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.75□□□□□ -1.49
CCDC9-203ENST00000596938 C14orf144Q96I85 54 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms