RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 FAM168BA1KXE4 195 aa4.56□□□□□ -1.68
VMP1-213ENST00000591877 LINC00587B1AMM8 73 aa4.56□□□□□ -1.68
VMP1-213ENST00000591877 F8VRH5 84 aa4.56□□□□□ -1.68
VMP1-213ENST00000591877 IGKCP01834 107 aa4.56□□□□□ -1.68
VMP1-213ENST00000591877 TLX1NBP0CAT3 122 aa4.56□□□□□ -1.68
VMP1-213ENST00000591877 IGLC3P0DOY3 106 aa4.56□□□□□ -1.68
VMP1-213ENST00000591877 PLNP26678 52 aa4.56□□□□□ -1.68
VMP1-213ENST00000591877 UBE2D1P51668 147 aa4.56□□□□□ -1.68
VMP1-213ENST00000591877 KRTAP11-1Q8IUC1 163 aa4.56□□□□□ -1.68
VMP1-213ENST00000591877 AMELXQ99217 191 aa4.56□□□□□ -1.68
VMP1-213ENST00000591877 PMCHL2Q9BQD1 86 aa4.56□□□□□ -1.68
VMP1-213ENST00000591877 MIEN1Q9BRT3 115 aa4.56□□□□□ -1.68
VMP1-213ENST00000591877 UQCR10Q9UDW1 63 aa4.56□□□□□ -1.68
VMP1-213ENST00000591877 PSORS1C2Q9UIG4 136 aa4.56□□□□□ -1.68
VMP1-213ENST00000591877 NDUFA1O15239 70 aa4.55□□□□□ -1.68
VMP1-213ENST00000591877 PMVKQ15126 192 aa4.55□□□□□ -1.68
VMP1-213ENST00000591877 C2orf82Q6UX34 121 aa4.55□□□□□ -1.68
VMP1-213ENST00000591877 SLC25A34Q6PIV7 304 aa4.54□□□□□ -1.68
VMP1-213ENST00000591877 FAM19A3Q7Z5A8 133 aa4.54□□□□□ -1.68
VMP1-213ENST00000591877 COX8AP10176 69 aa4.53□□□□□ -1.68
VMP1-213ENST00000591877 C1orf137Q5JT78 98 aa4.53□□□□□ -1.68
VMP1-213ENST00000591877 C9orf129Q5T035 196 aaKnown RBP4.53□□□□□ -1.68
VMP1-213ENST00000591877 CST9LQ9H4G1 147 aa4.53□□□□□ -1.68
VMP1-213ENST00000591877 TRBV30A0A0K0K1B3 111 aa4.52□□□□□ -1.69
VMP1-213ENST00000591877 DLEU1O43261 78 aa4.52□□□□□ -1.69
VMP1-213ENST00000591877 HERVK_113P61574 105 aa4.52□□□□□ -1.69
VMP1-213ENST00000591877 FAM19A5Q7Z5A7 132 aaPredicted RBP4.52□□□□□ -1.69
VMP1-213ENST00000591877 C14orf144Q96I85 54 aa4.52□□□□□ -1.69
VMP1-213ENST00000591877 C2orf88Q9BSF0 95 aa4.52□□□□□ -1.69
VMP1-213ENST00000591877 C11orf86A6NJI1 115 aa4.51□□□□□ -1.69
VMP1-213ENST00000591877 NDUFC2-KCTD14E9PQ53 114 aa4.51□□□□□ -1.69
VMP1-213ENST00000591877 IGLV7-43P04211 117 aa4.51□□□□□ -1.69
VMP1-213ENST00000591877 BOD1L2Q8IYS8 172 aa4.51□□□□□ -1.69
VMP1-213ENST00000591877 TOMM7Q9P0U1 55 aa4.51□□□□□ -1.69
VMP1-213ENST00000591877 CDKN2A-AS1Q9UH64 79 aa4.51□□□□□ -1.69
VMP1-213ENST00000591877 LRP2P98164 4655 aa4.51□□□□□ -1.69
VMP1-213ENST00000591877 M0R143 59 aa4.5□□□□□ -1.69
VMP1-213ENST00000591877 NMUP48645 174 aa4.5□□□□□ -1.69
VMP1-213ENST00000591877 KRTAP10-12P60413 245 aa4.5□□□□□ -1.69
VMP1-213ENST00000591877 Q8IZM0 81 aa4.5□□□□□ -1.69
VMP1-213ENST00000591877 IGKV2D-26A0A0A0MRZ7 120 aa4.49□□□□□ -1.69
VMP1-213ENST00000591877 A0A0J9YXY3 114 aa4.49□□□□□ -1.69
VMP1-213ENST00000591877 TINCRA0A1B0GVN0 87 aa4.49□□□□□ -1.69
VMP1-213ENST00000591877 M0QXV9 152 aa4.49□□□□□ -1.69
VMP1-213ENST00000591877 ZNF22P17026 224 aaPredicted RBP4.49□□□□□ -1.69
VMP1-213ENST00000591877 HERVK_113P63121 156 aa4.49□□□□□ -1.69
VMP1-213ENST00000591877 SEC11AP67812 179 aa4.49□□□□□ -1.69
VMP1-213ENST00000591877 CTAG1AP78358 180 aa4.49□□□□□ -1.69
VMP1-213ENST00000591877 C2orf91Q6ZV80 131 aa4.49□□□□□ -1.69
VMP1-213ENST00000591877 LINC00469Q8N7U9 141 aa4.49□□□□□ -1.69
VMP1-213ENST00000591877 KRTAP4-16G5E9R7 235 aaPredicted RBP4.48□□□□□ -1.69
VMP1-213ENST00000591877 H0Y9J4 135 aa4.48□□□□□ -1.69
VMP1-213ENST00000591877 KRTAP1-4P0C5Y4 121 aa4.48□□□□□ -1.69
VMP1-213ENST00000591877 CKS1BP61024 79 aa4.48□□□□□ -1.69
VMP1-213ENST00000591877 TMEM170BQ5T4T1 132 aa4.48□□□□□ -1.69
VMP1-213ENST00000591877 PCP2Q8IVA1 136 aa4.48□□□□□ -1.69
VMP1-213ENST00000591877 SNHG12Q9BXW3 62 aa4.48□□□□□ -1.69
VMP1-213ENST00000591877 HIGD1BQ9P298 99 aa4.48□□□□□ -1.69
VMP1-213ENST00000591877 TMEM223A0PJW6 202 aa4.47□□□□□ -1.69
VMP1-213ENST00000591877 DIRC1Q969H9 104 aa4.47□□□□□ -1.69
VMP1-213ENST00000591877 PLEKHB2Q96CS7 222 aa4.47□□□□□ -1.69
VMP1-213ENST00000591877 KRTAP4-3Q9BYR4 195 aa4.47□□□□□ -1.69
VMP1-213ENST00000591877 XAGE1AQ9HD64 81 aa4.47□□□□□ -1.69
VMP1-213ENST00000591877 C22orf24Q9Y442 160 aa4.47□□□□□ -1.69
VMP1-213ENST00000591877 RNF213Q63HN8 5207 aa4.46□□□□□ -1.7
VMP1-213ENST00000591877 MYMXA0A1B0GTQ4 84 aa4.46□□□□□ -1.7
VMP1-213ENST00000591877 H3BRM9 83 aa4.46□□□□□ -1.7
VMP1-213ENST00000591877 LEPROTO15243 131 aa4.46□□□□□ -1.7
VMP1-213ENST00000591877 DSCR10P59022 87 aa4.46□□□□□ -1.7
VMP1-213ENST00000591877 UBE2BP63146 152 aa4.46□□□□□ -1.7
VMP1-213ENST00000591877 HSD52Q0P140 79 aa4.46□□□□□ -1.7
VMP1-213ENST00000591877 CEND1Q8N111 149 aa4.46□□□□□ -1.7
VMP1-213ENST00000591877 TP73-AS1Q9UF72 201 aa4.46□□□□□ -1.7
VMP1-213ENST00000591877 ZNF815PA8K554 130 aa4.45□□□□□ -1.7
VMP1-213ENST00000591877 J3QQQ9 107 aa4.45□□□□□ -1.7
VMP1-213ENST00000591877 SPINK8P0C7L1 97 aa4.45□□□□□ -1.7
VMP1-213ENST00000591877 CXCL5P42830 114 aa4.45□□□□□ -1.7
VMP1-213ENST00000591877 COX7B2Q8TF08 81 aa4.45□□□□□ -1.7
VMP1-213ENST00000591877 TTTY13Q9BZ97 58 aa4.45□□□□□ -1.7
VMP1-213ENST00000591877 LGALS3P17931 250 aaKnown RBP4.44□□□□□ -1.7
VMP1-213ENST00000591877 HINT1P49773 126 aaPredicted RBP4.44□□□□□ -1.7
VMP1-213ENST00000591877 TSPEAR-AS2P59090 65 aa4.44□□□□□ -1.7
VMP1-213ENST00000591877 TAL2Q16559 108 aa4.44□□□□□ -1.7
VMP1-213ENST00000591877 COL5A1-AS1Q5SY13 56 aa4.44□□□□□ -1.7
VMP1-213ENST00000591877 BVES-AS1Q5T3Y7 98 aa4.44□□□□□ -1.7
VMP1-213ENST00000591877 IGLV1-50A0A075B6I6 118 aa4.43□□□□□ -1.7
VMP1-213ENST00000591877 ZNF861PO60384 105 aa4.43□□□□□ -1.7
VMP1-213ENST00000591877 BATFQ16520 125 aa4.43□□□□□ -1.7
VMP1-213ENST00000591877 SCGB1D4Q6XE38 83 aa4.43□□□□□ -1.7
VMP1-213ENST00000591877 MRPL55Q7Z7F7 128 aaKnown RBP4.43□□□□□ -1.7
VMP1-213ENST00000591877 LINC00167Q96N53 147 aa4.43□□□□□ -1.7
VMP1-213ENST00000591877 SPANXB1Q9NS25 103 aaPredicted RBP4.42□□□□□ -1.7
VMP1-213ENST00000591877 NDUFA12Q9UI09 145 aa4.42□□□□□ -1.7
VMP1-213ENST00000591877 LPAP08519 4548 aa4.42□□□□□ -1.7
VMP1-213ENST00000591877 A6NDN8 102 aa4.41□□□□□ -1.7
VMP1-213ENST00000591877 TMEM238C9JI98 176 aa4.4□□□□□ -1.71
VMP1-213ENST00000591877 BCE1O60756 84 aa4.4□□□□□ -1.71
VMP1-213ENST00000591877 TIMM17BO60830 172 aa4.4□□□□□ -1.71
VMP1-213ENST00000591877 SFTA2Q6UW10 78 aa4.4□□□□□ -1.71
VMP1-213ENST00000591877 KRTAP13-1Q8IUC0 172 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms