RNA–Protein interactions for RNA: ENST00000590339.5

VPS25-205, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 668 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-205ENST00000590339 DIRC1Q969H9 104 aa6.03□□□□□ -1.44
VPS25-205ENST00000590339 CBY1Q9Y3M2 126 aa6.03□□□□□ -1.44
VPS25-205ENST00000590339 PKD1P98161 4303 aa6.03□□□□□ -1.44
VPS25-205ENST00000590339 DNAL4O96015 105 aa6.02□□□□□ -1.45
VPS25-205ENST00000590339 BAALC-AS2P0C853 105 aa6.02□□□□□ -1.45
VPS25-205ENST00000590339 LINC00575Q6W349 94 aa6.02□□□□□ -1.45
VPS25-205ENST00000590339 KRTAP7-1Q8IUC3 87 aa6.02□□□□□ -1.45
VPS25-205ENST00000590339 C7orf33Q8WU49 177 aa6.02□□□□□ -1.45
VPS25-205ENST00000590339 TEX49A0A1B0GTD5 131 aa6.01□□□□□ -1.45
VPS25-205ENST00000590339 ZNF73O43830 326 aaPredicted RBP6.01□□□□□ -1.45
VPS25-205ENST00000590339 ELOF1P60002 83 aaKnown RBP6.01□□□□□ -1.45
VPS25-205ENST00000590339 Q8N814 137 aa6.01□□□□□ -1.45
VPS25-205ENST00000590339 NKAPP1Q8N9T2 125 aa6.01□□□□□ -1.45
VPS25-205ENST00000590339 PCLOQ9Y6V0 5065 aa6.01□□□□□ -1.45
VPS25-205ENST00000590339 PKHD1P08F94 4074 aa6□□□□□ -1.45
VPS25-205ENST00000590339 RYR1P21817 5038 aa6□□□□□ -1.45
VPS25-205ENST00000590339 A0A096LNI7 61 aa6□□□□□ -1.45
VPS25-205ENST00000590339 GAGE2BQ13066 116 aa6□□□□□ -1.45
VPS25-205ENST00000590339 KRTAP4-5Q9BYR2 181 aa6□□□□□ -1.45
VPS25-205ENST00000590339 KCNQ1DNQ9H478 68 aa6□□□□□ -1.45
VPS25-205ENST00000590339 A0A087WTM6 91 aa5.99□□□□□ -1.45
VPS25-205ENST00000590339 FAM168BA1KXE4 195 aa5.99□□□□□ -1.45
VPS25-205ENST00000590339 PRYO14603 147 aa5.99□□□□□ -1.45
VPS25-205ENST00000590339 COX7BP24311 80 aa5.99□□□□□ -1.45
VPS25-205ENST00000590339 OBSCN-AS1Q96MR7 158 aa5.99□□□□□ -1.45
VPS25-205ENST00000590339 ORMDL1Q9P0S3 153 aa5.99□□□□□ -1.45
VPS25-205ENST00000590339 PKIGQ9Y2B9 76 aa5.99□□□□□ -1.45
VPS25-205ENST00000590339 CDK2AP2O75956 126 aa5.98□□□□□ -1.45
VPS25-205ENST00000590339 SPRR1AP35321 89 aa5.98□□□□□ -1.45
VPS25-205ENST00000590339 LINC00528Q8N1L1 170 aa5.98□□□□□ -1.45
VPS25-205ENST00000590339 C9orf163Q8N9P6 203 aa5.98□□□□□ -1.45
VPS25-205ENST00000590339 VPS25Q9BRG1 176 aa5.98□□□□□ -1.45
VPS25-205ENST00000590339 IGLV1-50A0A075B6I6 118 aa5.97□□□□□ -1.45
VPS25-205ENST00000590339 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.97□□□□□ -1.45
VPS25-205ENST00000590339 hADV29S1A0JD25 119 aa5.97□□□□□ -1.45
VPS25-205ENST00000590339 KRTAP4-16G5E9R7 235 aaPredicted RBP5.97□□□□□ -1.45
VPS25-205ENST00000590339 FAM19A5Q7Z5A7 132 aaPredicted RBP5.97□□□□□ -1.45
VPS25-205ENST00000590339 CDIP1Q9H305 208 aa5.97□□□□□ -1.45
VPS25-205ENST00000590339 LRP1BQ9NZR2 4599 aa5.96□□□□□ -1.46
VPS25-205ENST00000590339 FAM240AA0A1B0GVK7 77 aa5.96□□□□□ -1.46
VPS25-205ENST00000590339 SNCGO76070 127 aa5.96□□□□□ -1.46
VPS25-205ENST00000590339 MRPL55Q7Z7F7 128 aaKnown RBP5.96□□□□□ -1.46
VPS25-205ENST00000590339 INAFM2P0DMQ5 153 aa5.95□□□□□ -1.46
VPS25-205ENST00000590339 KRTAP10-1P60331 282 aa5.95□□□□□ -1.46
VPS25-205ENST00000590339 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.95□□□□□ -1.46
VPS25-205ENST00000590339 H3BQ85 93 aa5.94□□□□□ -1.46
VPS25-205ENST00000590339 TMEM256-PLSCR3K7ERE1 68 aa5.94□□□□□ -1.46
VPS25-205ENST00000590339 SDIM1Q6ZPB5 146 aa5.94□□□□□ -1.46
VPS25-205ENST00000590339 Q6ZQY7 126 aa5.94□□□□□ -1.46
VPS25-205ENST00000590339 ABCA13Q86UQ4 5058 aa5.93□□□□□ -1.46
VPS25-205ENST00000590339 IGLV5-52A0A0A0MRZ9 124 aa5.93□□□□□ -1.46
VPS25-205ENST00000590339 IGKV2-24A0A0C4DH68 120 aa5.93□□□□□ -1.46
VPS25-205ENST00000590339 A0A1W2PNN7 141 aa5.93□□□□□ -1.46
VPS25-205ENST00000590339 EPM2AB3EWF7 344 aa5.93□□□□□ -1.46
VPS25-205ENST00000590339 B5MCH6 92 aa5.93□□□□□ -1.46
VPS25-205ENST00000590339 Q8N1X5 172 aa5.93□□□□□ -1.46
VPS25-205ENST00000590339 HSPG2P98160 4391 aa5.92□□□□□ -1.46
VPS25-205ENST00000590339 DNAH5Q8TE73 4624 aa5.92□□□□□ -1.46
VPS25-205ENST00000590339 RPL37AP8A6NKH3 93 aa5.92□□□□□ -1.46
VPS25-205ENST00000590339 CHTF8P0CG12 524 aa5.92□□□□□ -1.46
VPS25-205ENST00000590339 XGP55808 180 aa5.92□□□□□ -1.46
VPS25-205ENST00000590339 HAMPP81172 84 aa5.92□□□□□ -1.46
VPS25-205ENST00000590339 Q6ZRX8 168 aa5.92□□□□□ -1.46
VPS25-205ENST00000590339 JMJD7-PLA2G4BH0Y9G9 81 aa5.91□□□□□ -1.46
VPS25-205ENST00000590339 SMR3BP02814 79 aaPredicted RBP5.91□□□□□ -1.46
VPS25-205ENST00000590339 LINC00474Q9P2X8 69 aa5.91□□□□□ -1.46
VPS25-205ENST00000590339 ETDCA0A1B0GVM5 59 aa5.9□□□□□ -1.46
VPS25-205ENST00000590339 ACYP1P07311 99 aa5.9□□□□□ -1.46
VPS25-205ENST00000590339 REG3GQ6UW15 175 aa5.9□□□□□ -1.46
VPS25-205ENST00000590339 SPACA4Q8TDM5 124 aa5.9□□□□□ -1.46
VPS25-205ENST00000590339 Q9BRP9 147 aa5.9□□□□□ -1.46
VPS25-205ENST00000590339 C14orf132Q9NPU4 83 aa5.9□□□□□ -1.46
VPS25-205ENST00000590339 DHRS4-AS1Q9P1J3 65 aa5.9□□□□□ -1.46
VPS25-205ENST00000590339 APOBP04114 4563 aaKnown RBP5.9□□□□□ -1.47
VPS25-205ENST00000590339 PANO1I0J062 215 aa5.89□□□□□ -1.47
VPS25-205ENST00000590339 GHRHP01286 108 aa5.89□□□□□ -1.47
VPS25-205ENST00000590339 LINC01547P58512 204 aaPredicted RBP5.88□□□□□ -1.47
VPS25-205ENST00000590339 FAM30AQ9NZY2 134 aa5.88□□□□□ -1.47
VPS25-205ENST00000590339 IGLV5-48A0A075B6I7 105 aa5.87□□□□□ -1.47
VPS25-205ENST00000590339 LOC110117498A0A087WWA1 95 aa5.87□□□□□ -1.47
VPS25-205ENST00000590339 PHF5AQ7RTV0 110 aaKnown RBP5.87□□□□□ -1.47
VPS25-205ENST00000590339 KRTAP11-1Q8IUC1 163 aa5.87□□□□□ -1.47
VPS25-205ENST00000590339 SIGMAR1Q99720 223 aa5.87□□□□□ -1.47
VPS25-205ENST00000590339 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.87□□□□□ -1.47
VPS25-205ENST00000590339 MT-ATP8P03928 68 aa5.86□□□□□ -1.47
VPS25-205ENST00000590339 CCKP06307 115 aa5.86□□□□□ -1.47
VPS25-205ENST00000590339 GAGE2AQ6NT46 116 aa5.86□□□□□ -1.47
VPS25-205ENST00000590339 SMCR5Q8TEV8 140 aa5.86□□□□□ -1.47
VPS25-205ENST00000590339 TRBV7-4A0A0J9YYF1 115 aa5.85□□□□□ -1.47
VPS25-205ENST00000590339 Q5VSD8 79 aa5.85□□□□□ -1.47
VPS25-205ENST00000590339 Q6ZQT0 140 aa5.85□□□□□ -1.47
VPS25-205ENST00000590339 DNAH8Q96JB1 4490 aa5.85□□□□□ -1.47
VPS25-205ENST00000590339 A0A1B0GV72 72 aa5.84□□□□□ -1.47
VPS25-205ENST00000590339 H0Y9J4 135 aa5.84□□□□□ -1.47
VPS25-205ENST00000590339 FAM229AH3BQW9 127 aa5.84□□□□□ -1.47
VPS25-205ENST00000590339 ERC2-IT1O76042 136 aa5.84□□□□□ -1.47
VPS25-205ENST00000590339 NDUFV3P56181 108 aaKnown RBP5.84□□□□□ -1.47
VPS25-205ENST00000590339 RBM3P98179 157 aaKnown RBP5.84□□□□□ -1.47
VPS25-205ENST00000590339 Q8N377 158 aa5.84□□□□□ -1.47
VPS25-205ENST00000590339 LAMTOR3Q9UHA4 124 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms