RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 LINC00483Q53H64 154 aa10.31□□□□□ -0.76
SRSF1-208ENST00000584773 TRAV23DV6A0A075B6W5 121 aa10.3□□□□□ -0.76
SRSF1-208ENST00000584773 PET117Q6UWS5 81 aa10.3□□□□□ -0.76
SRSF1-208ENST00000584773 Q6ZRX8 168 aa10.3□□□□□ -0.76
SRSF1-208ENST00000584773 MUC17Q685J3 4493 aa10.29□□□□□ -0.76
SRSF1-208ENST00000584773 IGLV7-46A0A075B6I9 117 aa10.29□□□□□ -0.76
SRSF1-208ENST00000584773 LINC00308Q8TCZ7 52 aa10.28□□□□□ -0.76
SRSF1-208ENST00000584773 IGLV9-49A0A0B4J1Y8 123 aa10.27□□□□□ -0.77
SRSF1-208ENST00000584773 ZNF815PA8K554 130 aa10.27□□□□□ -0.77
SRSF1-208ENST00000584773 KRTDAPP60985 99 aa10.27□□□□□ -0.77
SRSF1-208ENST00000584773 MOBPQ13875 183 aa10.27□□□□□ -0.77
SRSF1-208ENST00000584773 SPAG11AQ6PDA7 123 aa10.27□□□□□ -0.77
SRSF1-208ENST00000584773 ZNF73O43830 326 aaPredicted RBP10.26□□□□□ -0.77
SRSF1-208ENST00000584773 CTAG1AP78358 180 aa10.25□□□□□ -0.77
SRSF1-208ENST00000584773 TPRXLQ17RH7 258 aa10.25□□□□□ -0.77
SRSF1-208ENST00000584773 C4orf48Q5BLP8 95 aa10.25□□□□□ -0.77
SRSF1-208ENST00000584773 COA6Q5JTJ3 125 aaKnown RBP10.25□□□□□ -0.77
SRSF1-208ENST00000584773 ST20-AS1Q8NBB2 130 aa10.24□□□□□ -0.77
SRSF1-208ENST00000584773 TIMM17BO60830 172 aa10.23□□□□□ -0.77
SRSF1-208ENST00000584773 CDIP1Q9H305 208 aa10.23□□□□□ -0.77
SRSF1-208ENST00000584773 SPANXCQ9NY87 97 aa10.23□□□□□ -0.77
SRSF1-208ENST00000584773 OR13C6PQ8NH95 151 aa10.22□□□□□ -0.77
SRSF1-208ENST00000584773 ANKRD39Q53RE8 183 aa10.21□□□□□ -0.78
SRSF1-208ENST00000584773 ATOH7Q8N100 152 aa10.21□□□□□ -0.78
SRSF1-208ENST00000584773 JOSD1Q15040 202 aaPredicted RBP10.2□□□□□ -0.78
SRSF1-208ENST00000584773 SPINK1P00995 79 aa10.18□□□□□ -0.78
SRSF1-208ENST00000584773 C5orf52A6NGY3 159 aa10.17□□□□□ -0.78
SRSF1-208ENST00000584773 S100A6P06703 90 aa10.17□□□□□ -0.78
SRSF1-208ENST00000584773 C9orf153Q5TBE3 101 aa10.17□□□□□ -0.78
SRSF1-208ENST00000584773 FAT4Q6V0I7 4981 aa10.17□□□□□ -0.78
SRSF1-208ENST00000584773 LOC105371267A0A1B0GV96 52 aa10.16□□□□□ -0.78
SRSF1-208ENST00000584773 SSBP3-AS1Q7Z2R9 100 aa10.16□□□□□ -0.78
SRSF1-208ENST00000584773 SCGB1D4Q6XE38 83 aa10.15□□□□□ -0.78
SRSF1-208ENST00000584773 FP248Q71RG6 208 aaPredicted RBP10.15□□□□□ -0.78
SRSF1-208ENST00000584773 SPANXDQ9BXN6 97 aa10.15□□□□□ -0.78
SRSF1-208ENST00000584773 C20orf202A1L168 122 aa10.14□□□□□ -0.79
SRSF1-208ENST00000584773 HINT1P49773 126 aaPredicted RBP10.14□□□□□ -0.79
SRSF1-208ENST00000584773 PCP2Q8IVA1 136 aa10.14□□□□□ -0.79
SRSF1-208ENST00000584773 Q8N377 158 aa10.14□□□□□ -0.79
SRSF1-208ENST00000584773 SNRPEP62304 92 aaKnown RBP10.13□□□□□ -0.79
SRSF1-208ENST00000584773 KRTAP13-3Q3SY46 172 aa10.13□□□□□ -0.79
SRSF1-208ENST00000584773 C6orf99Q4VX62 202 aa10.12□□□□□ -0.79
SRSF1-208ENST00000584773 CBY1Q9Y3M2 126 aa10.11□□□□□ -0.79
SRSF1-208ENST00000584773 COX7BP24311 80 aa10.1□□□□□ -0.79
SRSF1-208ENST00000584773 ELOF1P60002 83 aaKnown RBP10.09□□□□□ -0.79
SRSF1-208ENST00000584773 LINC00518Q8N0U6 118 aa10.09□□□□□ -0.79
SRSF1-208ENST00000584773 MUSTN1Q8IVN3 82 aa10.08□□□□□ -0.8
SRSF1-208ENST00000584773 HIST3H2BBQ8N257 126 aa10.08□□□□□ -0.8
SRSF1-208ENST00000584773 DHRS4-AS1Q9P1J3 65 aa10.08□□□□□ -0.8
SRSF1-208ENST00000584773 SPRR1BP22528 89 aa10.07□□□□□ -0.8
SRSF1-208ENST00000584773 RPS29P62273 56 aaKnown RBP10.07□□□□□ -0.8
SRSF1-208ENST00000584773 A0A0U1RQV1 116 aa10.07□□□□□ -0.8
SRSF1-208ENST00000584773 HRCT1Q6UXD1 115 aa10.06□□□□□ -0.8
SRSF1-208ENST00000584773 DEFB105AQ8NG35 78 aa10.06□□□□□ -0.8
SRSF1-208ENST00000584773 A6NDN8 102 aa10.05□□□□□ -0.8
SRSF1-208ENST00000584773 SLC25A20O43772 301 aa10.05□□□□□ -0.8
SRSF1-208ENST00000584773 IFITM1P13164 125 aa10.05□□□□□ -0.8
SRSF1-208ENST00000584773 HIST1H2BLQ99880 126 aa10.05□□□□□ -0.8
SRSF1-208ENST00000584773 Q1RN00 199 aa10.04□□□□□ -0.8
SRSF1-208ENST00000584773 S100A2P29034 98 aa10.03□□□□□ -0.8
SRSF1-208ENST00000584773 TAL2Q16559 108 aa10.02□□□□□ -0.81
SRSF1-208ENST00000584773 Q6ZVH6 145 aa10.01□□□□□ -0.81
SRSF1-208ENST00000584773 COPS9Q8WXC6 57 aa10.01□□□□□ -0.81
SRSF1-208ENST00000584773 LAMTOR3Q9UHA4 124 aa10.01□□□□□ -0.81
SRSF1-208ENST00000584773 LCE2AQ5TA79 106 aaPredicted RBP10□□□□□ -0.81
SRSF1-208ENST00000584773 A0A1B0GWB2 263 aa9.99□□□□□ -0.81
SRSF1-208ENST00000584773 LINC01547P58512 204 aaPredicted RBP9.99□□□□□ -0.81
SRSF1-208ENST00000584773 SLC25A34Q6PIV7 304 aa9.99□□□□□ -0.81
SRSF1-208ENST00000584773 KRTAP4-1Q9BYQ7 146 aa9.99□□□□□ -0.81
SRSF1-208ENST00000584773 TRBV7-6A0A0J9YX20 115 aa9.98□□□□□ -0.81
SRSF1-208ENST00000584773 AKR1D1P51857 326 aa9.98□□□□□ -0.81
SRSF1-208ENST00000584773 ASB16-AS1Q495Z4 193 aa9.98□□□□□ -0.81
SRSF1-208ENST00000584773 SMIM29Q86T20 159 aa9.98□□□□□ -0.81
SRSF1-208ENST00000584773 SMIM11BQ8TCY0 68 aa9.98□□□□□ -0.81
SRSF1-208ENST00000584773 A0A0G2JQZ4 141 aa9.97□□□□□ -0.81
SRSF1-208ENST00000584773 TEX49A0A1B0GTD5 131 aa9.97□□□□□ -0.81
SRSF1-208ENST00000584773 TRAV13-2A0A0B4J235 113 aa9.94□□□□□ -0.82
SRSF1-208ENST00000584773 H7C2G1 150 aa9.94□□□□□ -0.82
SRSF1-208ENST00000584773 XP32Q5T750 250 aa9.94□□□□□ -0.82
SRSF1-208ENST00000584773 IGLV5-48A0A075B6I7 105 aa9.93□□□□□ -0.82
SRSF1-208ENST00000584773 SMIM6P0DI80 62 aa9.93□□□□□ -0.82
SRSF1-208ENST00000584773 HSBP1L1C9JCN9 74 aa9.92□□□□□ -0.82
SRSF1-208ENST00000584773 LIMD2Q9BT23 127 aa9.92□□□□□ -0.82
SRSF1-208ENST00000584773 A4D1N5 150 aa9.91□□□□□ -0.82
SRSF1-208ENST00000584773 PRO1933Q9H354 126 aa9.91□□□□□ -0.82
SRSF1-208ENST00000584773 SEC61BP60468 96 aaKnown RBP9.9□□□□□ -0.82
SRSF1-208ENST00000584773 C9orf92A6NGG3 77 aa9.88□□□□□ -0.83
SRSF1-208ENST00000584773 PYY3Q5JQD4 70 aa9.88□□□□□ -0.83
SRSF1-208ENST00000584773 C12orf57Q99622 126 aa9.88□□□□□ -0.83
SRSF1-208ENST00000584773 SCGB1D1O95968 90 aa9.87□□□□□ -0.83
SRSF1-208ENST00000584773 CD164Q04900 197 aa9.86□□□□□ -0.83
SRSF1-208ENST00000584773 NHP2Q9NX24 153 aaKnown RBP9.85□□□□□ -0.83
SRSF1-208ENST00000584773 LINC00575Q6W349 94 aa9.84□□□□□ -0.83
SRSF1-208ENST00000584773 COX8AP10176 69 aa9.82□□□□□ -0.84
SRSF1-208ENST00000584773 VAMP3Q15836 100 aa9.82□□□□□ -0.84
SRSF1-208ENST00000584773 C1orf195Q5TG92 126 aa9.82□□□□□ -0.84
SRSF1-208ENST00000584773 Q6ZQY7 126 aa9.82□□□□□ -0.84
SRSF1-208ENST00000584773 HIST1H4GQ99525 98 aa9.82□□□□□ -0.84
SRSF1-208ENST00000584773 KRTAP9-2Q9BYQ4 174 aa9.81□□□□□ -0.84
SRSF1-208ENST00000584773 hADV29S1A0JD25 119 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms