RNA–Protein interactions for RNA: ENST00000584074.5

PPP4R1-228, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-228ENST00000584074 GAGE2AQ6NT46 116 aa12.32□□□□□ -0.44
PPP4R1-228ENST00000584074 Q6ZRX8 168 aa12.32□□□□□ -0.44
PPP4R1-228ENST00000584074 SPAG11AQ6PDA7 123 aa12.31□□□□□ -0.44
PPP4R1-228ENST00000584074 TRAV23DV6A0A075B6W5 121 aa12.3□□□□□ -0.44
PPP4R1-228ENST00000584074 Q8NBF4 154 aa12.3□□□□□ -0.44
PPP4R1-228ENST00000584074 KRTDAPP60985 99 aa12.29□□□□□ -0.44
PPP4R1-228ENST00000584074 LINC00308Q8TCZ7 52 aa12.29□□□□□ -0.44
PPP4R1-228ENST00000584074 TTTY13Q9BZ97 58 aa12.29□□□□□ -0.44
PPP4R1-228ENST00000584074 ZNF815PA8K554 130 aa12.28□□□□□ -0.44
PPP4R1-228ENST00000584074 IGLV7-46A0A075B6I9 117 aa12.27□□□□□ -0.45
PPP4R1-228ENST00000584074 ZNF73O43830 326 aaPredicted RBP12.27□□□□□ -0.45
PPP4R1-228ENST00000584074 TIMM17BO60830 172 aa12.27□□□□□ -0.45
PPP4R1-228ENST00000584074 C4orf48Q5BLP8 95 aa12.27□□□□□ -0.45
PPP4R1-228ENST00000584074 SPANXCQ9NY87 97 aa12.25□□□□□ -0.45
PPP4R1-228ENST00000584074 IGLV9-49A0A0B4J1Y8 123 aa12.24□□□□□ -0.45
PPP4R1-228ENST00000584074 JOSD1Q15040 202 aaPredicted RBP12.24□□□□□ -0.45
PPP4R1-228ENST00000584074 MOBPQ13875 183 aa12.23□□□□□ -0.45
PPP4R1-228ENST00000584074 TPRXLQ17RH7 258 aa12.23□□□□□ -0.45
PPP4R1-228ENST00000584074 OR13C6PQ8NH95 151 aa12.22□□□□□ -0.45
PPP4R1-228ENST00000584074 CDIP1Q9H305 208 aa12.21□□□□□ -0.45
PPP4R1-228ENST00000584074 C20orf202A1L168 122 aa12.19□□□□□ -0.46
PPP4R1-228ENST00000584074 SPINK1P00995 79 aa12.19□□□□□ -0.46
PPP4R1-228ENST00000584074 ANKRD39Q53RE8 183 aa12.19□□□□□ -0.46
PPP4R1-228ENST00000584074 ATOH7Q8N100 152 aa12.19□□□□□ -0.46
PPP4R1-228ENST00000584074 ST20-AS1Q8NBB2 130 aa12.19□□□□□ -0.46
PPP4R1-228ENST00000584074 CBY1Q9Y3M2 126 aa12.19□□□□□ -0.46
PPP4R1-228ENST00000584074 HINT1P49773 126 aaPredicted RBP12.18□□□□□ -0.46
PPP4R1-228ENST00000584074 SSBP3-AS1Q7Z2R9 100 aa12.17□□□□□ -0.46
PPP4R1-228ENST00000584074 SPANXDQ9BXN6 97 aa12.17□□□□□ -0.46
PPP4R1-228ENST00000584074 SCGB1D4Q6XE38 83 aa12.16□□□□□ -0.46
PPP4R1-228ENST00000584074 FP248Q71RG6 208 aaPredicted RBP12.15□□□□□ -0.46
PPP4R1-228ENST00000584074 LINC00518Q8N0U6 118 aa12.13□□□□□ -0.47
PPP4R1-228ENST00000584074 C9orf153Q5TBE3 101 aa12.12□□□□□ -0.47
PPP4R1-228ENST00000584074 PCP2Q8IVA1 136 aa12.12□□□□□ -0.47
PPP4R1-228ENST00000584074 MUC17Q685J3 4493 aa12.11□□□□□ -0.47
PPP4R1-228ENST00000584074 C5orf52A6NGY3 159 aa12.11□□□□□ -0.47
PPP4R1-228ENST00000584074 C6orf99Q4VX62 202 aa12.1□□□□□ -0.47
PPP4R1-228ENST00000584074 DHRS4-AS1Q9P1J3 65 aa12.1□□□□□ -0.47
PPP4R1-228ENST00000584074 Q8N377 158 aa12.09□□□□□ -0.47
PPP4R1-228ENST00000584074 COX7BP24311 80 aa12.08□□□□□ -0.48
PPP4R1-228ENST00000584074 ELOF1P60002 83 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-228ENST00000584074 RPS29P62273 56 aaKnown RBP12.08□□□□□ -0.48
PPP4R1-228ENST00000584074 IFITM1P13164 125 aa12.07□□□□□ -0.48
PPP4R1-228ENST00000584074 AKR1D1P51857 326 aa12.07□□□□□ -0.48
PPP4R1-228ENST00000584074 KRTAP13-3Q3SY46 172 aa12.07□□□□□ -0.48
PPP4R1-228ENST00000584074 SPRR1BP22528 89 aa12.06□□□□□ -0.48
PPP4R1-228ENST00000584074 MUSTN1Q8IVN3 82 aa12.06□□□□□ -0.48
PPP4R1-228ENST00000584074 HIST3H2BBQ8N257 126 aa12.06□□□□□ -0.48
PPP4R1-228ENST00000584074 COPS9Q8WXC6 57 aa12.06□□□□□ -0.48
PPP4R1-228ENST00000584074 A0A0U1RQV1 116 aa12.04□□□□□ -0.48
PPP4R1-228ENST00000584074 Q6ZVH6 145 aa12.04□□□□□ -0.48
PPP4R1-228ENST00000584074 HIST1H2BLQ99880 126 aa12.04□□□□□ -0.48
PPP4R1-228ENST00000584074 A6NDN8 102 aa12.03□□□□□ -0.48
PPP4R1-228ENST00000584074 SLC25A20O43772 301 aa12.03□□□□□ -0.48
PPP4R1-228ENST00000584074 SNRPEP62304 92 aaKnown RBP12.02□□□□□ -0.49
PPP4R1-228ENST00000584074 TRBV7-6A0A0J9YX20 115 aa12.01□□□□□ -0.49
PPP4R1-228ENST00000584074 S100A2P29034 98 aa12.01□□□□□ -0.49
PPP4R1-228ENST00000584074 SLC25A34Q6PIV7 304 aa12.01□□□□□ -0.49
PPP4R1-228ENST00000584074 DEFB105AQ8NG35 78 aa12□□□□□ -0.49
PPP4R1-228ENST00000584074 S100A1P23297 94 aa11.99□□□□□ -0.49
PPP4R1-228ENST00000584074 LAMTOR3Q9UHA4 124 aa11.99□□□□□ -0.49
PPP4R1-228ENST00000584074 TAL2Q16559 108 aa11.98□□□□□ -0.49
PPP4R1-228ENST00000584074 A0A1B0GWB2 263 aa11.97□□□□□ -0.49
PPP4R1-228ENST00000584074 FAT4Q6V0I7 4981 aa11.97□□□□□ -0.49
PPP4R1-228ENST00000584074 Q1RN00 199 aa11.96□□□□□ -0.49
PPP4R1-228ENST00000584074 HRCT1Q6UXD1 115 aa11.96□□□□□ -0.49
PPP4R1-228ENST00000584074 TRAV13-2A0A0B4J235 113 aa11.94□□□□□ -0.5
PPP4R1-228ENST00000584074 TEX49A0A1B0GTD5 131 aa11.94□□□□□ -0.5
PPP4R1-228ENST00000584074 HSBP1L1C9JCN9 74 aa11.93□□□□□ -0.5
PPP4R1-228ENST00000584074 S100A6P06703 90 aa11.93□□□□□ -0.5
PPP4R1-228ENST00000584074 SMIM11BQ8TCY0 68 aa11.93□□□□□ -0.5
PPP4R1-228ENST00000584074 LINC01547P58512 204 aaPredicted RBP11.91□□□□□ -0.5
PPP4R1-228ENST00000584074 ASB16-AS1Q495Z4 193 aa11.91□□□□□ -0.5
PPP4R1-228ENST00000584074 SMIM29Q86T20 159 aa11.9□□□□□ -0.5
PPP4R1-228ENST00000584074 IGLV5-48A0A075B6I7 105 aa11.89□□□□□ -0.51
PPP4R1-228ENST00000584074 A4D1N5 150 aa11.89□□□□□ -0.51
PPP4R1-228ENST00000584074 LIMD2Q9BT23 127 aa11.89□□□□□ -0.51
PPP4R1-228ENST00000584074 PRO1933Q9H354 126 aa11.88□□□□□ -0.51
PPP4R1-228ENST00000584074 LCE2AQ5TA79 106 aaPredicted RBP11.86□□□□□ -0.51
PPP4R1-228ENST00000584074 SCGB1D1O95968 90 aa11.85□□□□□ -0.51
PPP4R1-228ENST00000584074 SEC61BP60468 96 aaKnown RBP11.84□□□□□ -0.51
PPP4R1-228ENST00000584074 CD164Q04900 197 aa11.84□□□□□ -0.51
PPP4R1-228ENST00000584074 NHP2Q9NX24 153 aaKnown RBP11.84□□□□□ -0.51
PPP4R1-228ENST00000584074 A0A0G2JQZ4 141 aa11.83□□□□□ -0.52
PPP4R1-228ENST00000584074 H7C2G1 150 aa11.83□□□□□ -0.52
PPP4R1-228ENST00000584074 XP32Q5T750 250 aa11.83□□□□□ -0.52
PPP4R1-228ENST00000584074 VAMP3Q15836 100 aa11.81□□□□□ -0.52
PPP4R1-228ENST00000584074 KRTAP4-1Q9BYQ7 146 aa11.81□□□□□ -0.52
PPP4R1-228ENST00000584074 LINC00575Q6W349 94 aa11.79□□□□□ -0.52
PPP4R1-228ENST00000584074 HIST1H4GQ99525 98 aa11.78□□□□□ -0.52
PPP4R1-228ENST00000584074 C12orf57Q99622 126 aa11.78□□□□□ -0.52
PPP4R1-228ENST00000584074 COX8AP10176 69 aa11.77□□□□□ -0.53
PPP4R1-228ENST00000584074 C9orf92A6NGG3 77 aa11.75□□□□□ -0.53
PPP4R1-228ENST00000584074 Q5XG85 94 aa11.74□□□□□ -0.53
PPP4R1-228ENST00000584074 hADV29S1A0JD25 119 aa11.73□□□□□ -0.53
PPP4R1-228ENST00000584074 Q6ZQY7 126 aa11.73□□□□□ -0.53
PPP4R1-228ENST00000584074 DLEU1O43261 78 aa11.71□□□□□ -0.53
PPP4R1-228ENST00000584074 C1orf195Q5TG92 126 aa11.71□□□□□ -0.53
PPP4R1-228ENST00000584074 C14orf144Q96I85 54 aa11.7□□□□□ -0.54
PPP4R1-228ENST00000584074 F8WEM9 126 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms