RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	IGHV4-30-4	P0DP06	118 aa		7.9	□□□□□ -1.14
CDK5RAP3-231	ENST00000584063	UBE2A	P49459	152 aa		7.9	□□□□□ -1.14
CDK5RAP3-231	ENST00000584063	ATP5E	P56381	51 aa	Predicted RBP	7.9	□□□□□ -1.14
CDK5RAP3-231	ENST00000584063	HTN3	P15516	51 aa		7.9	□□□□□ -1.15
CDK5RAP3-231	ENST00000584063	CMYA5	Q8N3K9	4069 aa		7.9	□□□□□ -1.15
CDK5RAP3-231	ENST00000584063	TRBV6-4	A0A1B0GX49	114 aa		7.89	□□□□□ -1.15
CDK5RAP3-231	ENST00000584063	LINC00269	Q8N2A0	174 aa		7.88	□□□□□ -1.15
CDK5RAP3-231	ENST00000584063	KRTAP10-11	P60412	298 aa		7.87	□□□□□ -1.15
CDK5RAP3-231	ENST00000584063	SYCN	Q0VAF6	134 aa		7.87	□□□□□ -1.15
CDK5RAP3-231	ENST00000584063		Q8NDZ9	215 aa		7.86	□□□□□ -1.15
CDK5RAP3-231	ENST00000584063	ANG	P03950	147 aa	Known RBP	7.85	□□□□□ -1.15
CDK5RAP3-231	ENST00000584063	IGHV4-28	A0A0C4DH34	117 aa		7.85	□□□□□ -1.15
CDK5RAP3-231	ENST00000584063	KLKP1	Q107X0	134 aa		7.85	□□□□□ -1.15
CDK5RAP3-231	ENST00000584063	ATP11AUN	Q6ZP68	121 aa		7.85	□□□□□ -1.15
CDK5RAP3-231	ENST00000584063	RMI2	Q96E14	147 aa		7.85	□□□□□ -1.15
CDK5RAP3-231	ENST00000584063	SNURF	Q9Y675	71 aa		7.85	□□□□□ -1.15
CDK5RAP3-231	ENST00000584063		Q1T7F1	81 aa		7.84	□□□□□ -1.15
CDK5RAP3-231	ENST00000584063	C16orf90	A8MZG2	172 aa		7.83	□□□□□ -1.16
CDK5RAP3-231	ENST00000584063	NANOS2	P60321	138 aa	Known RBP	7.83	□□□□□ -1.16
CDK5RAP3-231	ENST00000584063	REG3G	Q6UW15	175 aa		7.82	□□□□□ -1.16
CDK5RAP3-231	ENST00000584063	LINC00528	Q8N1L1	170 aa		7.82	□□□□□ -1.16
CDK5RAP3-231	ENST00000584063	C10orf25	Q5T742	122 aa		7.82	□□□□□ -1.16
CDK5RAP3-231	ENST00000584063	CXCL6	P80162	114 aa		7.82	□□□□□ -1.16
CDK5RAP3-231	ENST00000584063		Q6ZRP5	223 aa		7.82	□□□□□ -1.16
CDK5RAP3-231	ENST00000584063	ORMDL1	Q9P0S3	153 aa		7.82	□□□□□ -1.16
CDK5RAP3-231	ENST00000584063		H0YGX0	51 aa		7.81	□□□□□ -1.16
CDK5RAP3-231	ENST00000584063	UNQ6190/PRO20217	Q6UXQ8	127 aa		7.8	□□□□□ -1.16
CDK5RAP3-231	ENST00000584063	TRAV23DV6	A0A075B6W5	121 aa		7.8	□□□□□ -1.16
CDK5RAP3-231	ENST00000584063		M0R2N4	97 aa		7.79	□□□□□ -1.16
CDK5RAP3-231	ENST00000584063	STAB2	Q8WWQ8	2551 aa		7.79	□□□□□ -1.16
CDK5RAP3-231	ENST00000584063	NDUFC1	O43677	76 aa		7.78	□□□□□ -1.16
CDK5RAP3-231	ENST00000584063	XAGE1A	Q9HD64	81 aa		7.78	□□□□□ -1.16
CDK5RAP3-231	ENST00000584063	ENHO	Q6UWT2	76 aa		7.78	□□□□□ -1.16
CDK5RAP3-231	ENST00000584063	LINC00612	Q8N6U2	182 aa		7.78	□□□□□ -1.16
CDK5RAP3-231	ENST00000584063		Q8N814	137 aa		7.77	□□□□□ -1.16
CDK5RAP3-231	ENST00000584063	PRO0255	Q9UI72	69 aa		7.77	□□□□□ -1.16
CDK5RAP3-231	ENST00000584063		Q8NAQ8	132 aa		7.77	□□□□□ -1.17
CDK5RAP3-231	ENST00000584063	TRAV22	A0A0B4J277	110 aa		7.76	□□□□□ -1.17
CDK5RAP3-231	ENST00000584063	HCG22	E2RYF7	251 aa		7.76	□□□□□ -1.17
CDK5RAP3-231	ENST00000584063	SPART-AS1	P0CW21	52 aa		7.76	□□□□□ -1.17
CDK5RAP3-231	ENST00000584063	SCX	Q7RTU7	201 aa		7.76	□□□□□ -1.17
CDK5RAP3-231	ENST00000584063		Q8IZM0	81 aa		7.76	□□□□□ -1.17
CDK5RAP3-231	ENST00000584063	PRAC1	Q96KF2	57 aa		7.76	□□□□□ -1.17
CDK5RAP3-231	ENST00000584063	KLK12	Q9UKR0	248 aa		7.76	□□□□□ -1.17
CDK5RAP3-231	ENST00000584063	LRCOL1	A6NCL2	159 aa		7.76	□□□□□ -1.17
CDK5RAP3-231	ENST00000584063	MIF	P14174	115 aa		7.76	□□□□□ -1.17
CDK5RAP3-231	ENST00000584063		Q6JHZ5	121 aa		7.76	□□□□□ -1.17
CDK5RAP3-231	ENST00000584063	OBSCN-AS1	Q96MR7	158 aa		7.74	□□□□□ -1.17
CDK5RAP3-231	ENST00000584063	HAMP	P81172	84 aa		7.72	□□□□□ -1.17
CDK5RAP3-231	ENST00000584063	SPAG11B	Q08648	103 aa		7.72	□□□□□ -1.17
CDK5RAP3-231	ENST00000584063	ADM2	Q7Z4H4	148 aa		7.72	□□□□□ -1.17
CDK5RAP3-231	ENST00000584063	TENM2	Q9NT68	2774 aa		7.72	□□□□□ -1.17
CDK5RAP3-231	ENST00000584063	TRAV7	A0A075B6U4	112 aa		7.72	□□□□□ -1.17
CDK5RAP3-231	ENST00000584063	HIGD2B	Q4VC39	106 aa		7.72	□□□□□ -1.17
CDK5RAP3-231	ENST00000584063		A0A0J9YWU9	116 aa		7.71	□□□□□ -1.17
CDK5RAP3-231	ENST00000584063		A0A1B0GUV1	79 aa		7.71	□□□□□ -1.17
CDK5RAP3-231	ENST00000584063	SEC61B	P60468	96 aa	Known RBP	7.71	□□□□□ -1.17
CDK5RAP3-231	ENST00000584063	EGFEM1P	Q0D2K5	195 aa		7.71	□□□□□ -1.17
CDK5RAP3-231	ENST00000584063		Q6ZTC4	211 aa		7.71	□□□□□ -1.18
CDK5RAP3-231	ENST00000584063		Q6ZQY7	126 aa		7.71	□□□□□ -1.18
CDK5RAP3-231	ENST00000584063	RETNLB	Q9BQ08	111 aa		7.71	□□□□□ -1.18
CDK5RAP3-231	ENST00000584063	COL7A1	Q02388	2944 aa		7.68	□□□□□ -1.18
CDK5RAP3-231	ENST00000584063	TRBV10-3	A0A0K0K1G6	114 aa		7.68	□□□□□ -1.18
CDK5RAP3-231	ENST00000584063	CHKB-CPT1B	H3BT56	60 aa		7.68	□□□□□ -1.18
CDK5RAP3-231	ENST00000584063	DNAH3	Q8TD57	4116 aa		7.67	□□□□□ -1.18
CDK5RAP3-231	ENST00000584063	CDK2AP2	O75956	126 aa		7.67	□□□□□ -1.18
CDK5RAP3-231	ENST00000584063	LINC00575	Q6W349	94 aa		7.67	□□□□□ -1.18
CDK5RAP3-231	ENST00000584063	UBL5	Q9BZL1	73 aa		7.66	□□□□□ -1.18
CDK5RAP3-231	ENST00000584063	IGLV9-49	A0A0B4J1Y8	123 aa		7.66	□□□□□ -1.18
CDK5RAP3-231	ENST00000584063	JMJD7-PLA2G4B	H0Y9G9	81 aa		7.66	□□□□□ -1.18
CDK5RAP3-231	ENST00000584063		Q5VV11	94 aa		7.66	□□□□□ -1.18
CDK5RAP3-231	ENST00000584063		K7EIL1	84 aa		7.65	□□□□□ -1.18
CDK5RAP3-231	ENST00000584063	DNHD1	Q96M86	4753 aa		7.65	□□□□□ -1.19
CDK5RAP3-231	ENST00000584063	TRAV10	A0A0B4J240	114 aa		7.64	□□□□□ -1.19
CDK5RAP3-231	ENST00000584063	KPRP	Q5T749	579 aa	Predicted RBP	7.64	□□□□□ -1.19
CDK5RAP3-231	ENST00000584063	WFDC10B	Q8IUB3	73 aa		7.64	□□□□□ -1.19
CDK5RAP3-231	ENST00000584063	C6orf48	Q9UBA6	75 aa		7.64	□□□□□ -1.19
CDK5RAP3-231	ENST00000584063	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	7.64	□□□□□ -1.19
CDK5RAP3-231	ENST00000584063	DEFB131B	A0A096LNP1	70 aa		7.63	□□□□□ -1.19
CDK5RAP3-231	ENST00000584063		Q6ZQT0	140 aa		7.63	□□□□□ -1.19
CDK5RAP3-231	ENST00000584063		Q8N9L7	120 aa		7.63	□□□□□ -1.19
CDK5RAP3-231	ENST00000584063	LINC00167	Q96N53	147 aa		7.63	□□□□□ -1.19
CDK5RAP3-231	ENST00000584063	hDV103S1	A0JD37	113 aa		7.63	□□□□□ -1.19
CDK5RAP3-231	ENST00000584063	COX17	Q14061	63 aa		7.62	□□□□□ -1.19
CDK5RAP3-231	ENST00000584063	C3orf84	H3BNL1	204 aa		7.61	□□□□□ -1.19
CDK5RAP3-231	ENST00000584063	LINC01547	P58512	204 aa	Predicted RBP	7.61	□□□□□ -1.19
CDK5RAP3-231	ENST00000584063	DEFB105A	Q8NG35	78 aa		7.61	□□□□□ -1.19
CDK5RAP3-231	ENST00000584063	LELP1	Q5T871	98 aa		7.6	□□□□□ -1.19
CDK5RAP3-231	ENST00000584063	CAMK2N2	Q96S95	79 aa		7.59	□□□□□ -1.19
CDK5RAP3-231	ENST00000584063	LINC00476	Q8WZB0	136 aa		7.59	□□□□□ -1.19
CDK5RAP3-231	ENST00000584063	BCE1	O60756	84 aa		7.59	□□□□□ -1.2
CDK5RAP3-231	ENST00000584063	IGLV6-57	P01721	117 aa		7.58	□□□□□ -1.2
CDK5RAP3-231	ENST00000584063	MOBP	Q13875	183 aa		7.58	□□□□□ -1.2
CDK5RAP3-231	ENST00000584063	CSMD3	Q7Z407	3707 aa		7.58	□□□□□ -1.2
CDK5RAP3-231	ENST00000584063	LYST	Q99698	3801 aa		7.57	□□□□□ -1.2
CDK5RAP3-231	ENST00000584063	TG	P01266	2768 aa		7.57	□□□□□ -1.2
CDK5RAP3-231	ENST00000584063	MUC7	Q8TAX7	377 aa		7.57	□□□□□ -1.2
CDK5RAP3-231	ENST00000584063	PRR34	Q9NV39	138 aa		7.57	□□□□□ -1.2
CDK5RAP3-231	ENST00000584063	HUWE1	Q7Z6Z7	4374 aa	Known RBP	7.56	□□□□□ -1.2
CDK5RAP3-231	ENST00000584063	COX7B	P24311	80 aa		7.55	□□□□□ -1.2

Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms