RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 FXYD6Q9H0Q3 95 aa0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 Q9H521 79 aa0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 RABAC1Q9UI14 185 aa0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 UBE2D4Q9Y2X8 147 aa0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 CCDC88BA6NC98 1476 aa0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 ATP7BP35670 1465 aa0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 SLIT1O75093 1534 aa0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 MAGI3Q5TCQ9 1506 aa0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 THOC2Q8NI27 1593 aaKnown RBP0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 CREBBPQ92793 2442 aa0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 SPG11Q96JI7 2443 aa0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 SETD2Q9BYW2 2564 aaPredicted RBP0□□□□□ -2.41
SMCHD1-206ENST00000581631 NBEAL1Q6ZS30 2694 aa0□□□□□ -2.41
SMCHD1-206ENST00000581631 ZZEF1O43149 2961 aa0□□□□□ -2.41
SMCHD1-206ENST00000581631 HSPG2P98160 4391 aa0□□□□□ -2.41
SMCHD1-206ENST00000581631 A0A1B0GUT8 65 aa0□□□□□ -2.41
SMCHD1-206ENST00000581631 PIK3C2BO00750 1634 aa0□□□□□ -2.41
SMCHD1-206ENST00000581631 NDUFB1O75438 58 aa0□□□□□ -2.41
SMCHD1-206ENST00000581631 CYB5AP00167 134 aa0□□□□□ -2.41
SMCHD1-206ENST00000581631 SPRR2BP35325 72 aa0□□□□□ -2.41
SMCHD1-206ENST00000581631 NWD1Q149M9 1564 aa0□□□□□ -2.41
SMCHD1-206ENST00000581631 PYY3Q5JQD4 70 aa0□□□□□ -2.41
SMCHD1-206ENST00000581631 MAGI2Q86UL8 1455 aa0□□□□□ -2.41
SMCHD1-206ENST00000581631 DOT1LQ8TEK3 1739 aa0□□□□□ -2.41
SMCHD1-206ENST00000581631 LRRC7Q96NW7 1537 aa0□□□□□ -2.41
SMCHD1-206ENST00000581631 PLIN4Q96Q06 1357 aa0□□□□□ -2.41
SMCHD1-206ENST00000581631 EPG5Q9HCE0 2579 aa-0□□□□□ -2.41
SMCHD1-206ENST00000581631 PTPN23Q9H3S7 1636 aa-0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 CEP170BQ9Y4F5 1589 aaPredicted RBP-0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 URB2Q14146 1524 aaKnown RBP-0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 M0R2T5 61 aa-0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 PRM1P04553 51 aa-0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 ACYP1P07311 99 aa-0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 IGLC2P0DOY2 106 aa-0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 IGLC3P0DOY3 106 aa-0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 SNRPFP62306 86 aaKnown RBP-0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 DEFB112Q30KQ8 113 aa-0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 NMSQ5H8A3 153 aa-0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 MRPL34Q9BQ48 92 aaKnown RBP-0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 CDKN2A-AS1Q9UH64 79 aa-0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 APLNQ9ULZ1 77 aa-0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 PDZD2O15018 2839 aa-0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 LRP2P98164 4655 aa-0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 ITSN1Q15811 1721 aa-0.01□□□□□ -2.41
SMCHD1-206ENST00000581631 SCRIBQ14160 1630 aa-0.02□□□□□ -2.41
SMCHD1-206ENST00000581631 SMARCA2P51531 1590 aa-0.02□□□□□ -2.41
SMCHD1-206ENST00000581631 ADAMTS12P58397 1594 aa-0.02□□□□□ -2.41
SMCHD1-206ENST00000581631 UACAQ9BZF9 1416 aa-0.02□□□□□ -2.41
SMCHD1-206ENST00000581631 HMGA1P17096 107 aaKnown RBP-0.02□□□□□ -2.41
SMCHD1-206ENST00000581631 COX7BP24311 80 aa-0.02□□□□□ -2.41
SMCHD1-206ENST00000581631 LINC00643Q86TS7 51 aa-0.02□□□□□ -2.41
SMCHD1-206ENST00000581631 C9orf62Q8N4C0 152 aa-0.02□□□□□ -2.41
SMCHD1-206ENST00000581631 HIGD1BQ9P298 99 aa-0.02□□□□□ -2.41
SMCHD1-206ENST00000581631 PLCH1Q4KWH8 1693 aa-0.02□□□□□ -2.41
SMCHD1-206ENST00000581631 ZNF831Q5JPB2 1677 aa-0.02□□□□□ -2.41
SMCHD1-206ENST00000581631 TGP01266 2768 aa-0.02□□□□□ -2.41
SMCHD1-206ENST00000581631 SRRM2Q9UQ35 2752 aaKnown RBP-0.02□□□□□ -2.41
SMCHD1-206ENST00000581631 CICQ96RK0 1608 aaPredicted RBP-0.02□□□□□ -2.41
SMCHD1-206ENST00000581631 NEXMIFQ5QGS0 1516 aa-0.03□□□□□ -2.41
SMCHD1-206ENST00000581631 HTTP42858 3142 aa-0.03□□□□□ -2.41
SMCHD1-206ENST00000581631 SPTBN4Q9H254 2564 aa-0.03□□□□□ -2.41
SMCHD1-206ENST00000581631 HYDINQ4G0P3 5121 aa-0.03□□□□□ -2.41
SMCHD1-206ENST00000581631 MYMXA0A1B0GTQ4 84 aa-0.03□□□□□ -2.41
SMCHD1-206ENST00000581631 KANTRA0A1W2PQU2 76 aa-0.03□□□□□ -2.41
SMCHD1-206ENST00000581631 IQCF6A8MYZ5 107 aa-0.03□□□□□ -2.41
SMCHD1-206ENST00000581631 K7EP34 96 aa-0.03□□□□□ -2.41
SMCHD1-206ENST00000581631 H1FX-AS1Q4G0G2 97 aa-0.03□□□□□ -2.41
SMCHD1-206ENST00000581631 HEPN1Q6WQI6 88 aa-0.03□□□□□ -2.41
SMCHD1-206ENST00000581631 S100A16Q96FQ6 103 aaKnown RBP-0.03□□□□□ -2.41
SMCHD1-206ENST00000581631 C20orf78Q9BR46 151 aa-0.03□□□□□ -2.41
SMCHD1-206ENST00000581631 DEPDC5O75140 1603 aa-0.03□□□□□ -2.41
SMCHD1-206ENST00000581631 FAM186AA6NE01 2351 aa-0.03□□□□□ -2.41
SMCHD1-206ENST00000581631 PLXNC1O60486 1568 aa-0.03□□□□□ -2.41
SMCHD1-206ENST00000581631 CFAP74Q9C0B2 1584 aa-0.03□□□□□ -2.41
SMCHD1-206ENST00000581631 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-0.03□□□□□ -2.41
SMCHD1-206ENST00000581631 KDM5DQ9BY66 1539 aa-0.03□□□□□ -2.41
SMCHD1-206ENST00000581631 LRP1BQ9NZR2 4599 aa-0.03□□□□□ -2.41
SMCHD1-206ENST00000581631 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.04□□□□□ -2.42
SMCHD1-206ENST00000581631 PRRC2CQ9Y520 2896 aaKnown RBP-0.04□□□□□ -2.42
SMCHD1-206ENST00000581631 CEP290O15078 2479 aa-0.04□□□□□ -2.42
SMCHD1-206ENST00000581631 NF1P21359 2839 aa-0.04□□□□□ -2.42
SMCHD1-206ENST00000581631 WIZO95785 1651 aa-0.04□□□□□ -2.42
SMCHD1-206ENST00000581631 TEP1Q99973 2627 aaKnown RBP-0.04□□□□□ -2.42
SMCHD1-206ENST00000581631 HECTD1Q9ULT8 2610 aa-0.04□□□□□ -2.42
SMCHD1-206ENST00000581631 GNG2P59768 71 aa-0.04□□□□□ -2.42
SMCHD1-206ENST00000581631 KLK9Q2XQG4 91 aa-0.04□□□□□ -2.42
SMCHD1-206ENST00000581631 DEFB135Q30KP9 77 aa-0.04□□□□□ -2.42
SMCHD1-206ENST00000581631 GAFA1Q96PS6 74 aa-0.04□□□□□ -2.42
SMCHD1-206ENST00000581631 DIP2BQ9P265 1576 aa-0.04□□□□□ -2.42
SMCHD1-206ENST00000581631 ABCC1P33527 1531 aa-0.04□□□□□ -2.42
SMCHD1-206ENST00000581631 DCAF1Q9Y4B6 1507 aa-0.04□□□□□ -2.42
SMCHD1-206ENST00000581631 MED14O60244 1454 aa-0.04□□□□□ -2.42
SMCHD1-206ENST00000581631 CCDC18Q5T9S5 1454 aa-0.04□□□□□ -2.42
SMCHD1-206ENST00000581631 TJP1Q07157 1748 aa-0.04□□□□□ -2.42
SMCHD1-206ENST00000581631 AKAP13Q12802 2813 aa-0.05□□□□□ -2.42
SMCHD1-206ENST00000581631 MXRA5Q9NR99 2828 aa-0.05□□□□□ -2.42
SMCHD1-206ENST00000581631 ZC3H13Q5T200 1668 aaKnown RBP-0.05□□□□□ -2.42
SMCHD1-206ENST00000581631 NHSQ6T4R5 1651 aa-0.05□□□□□ -2.42
SMCHD1-206ENST00000581631 USP32Q8NFA0 1604 aa-0.05□□□□□ -2.42
SMCHD1-206ENST00000581631 EIF2AK4Q9P2K8 1649 aaKnown RBP-0.05□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms