RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 hADV29S1A0JD25 119 aa13.21□□□□□ -0.3
SMG8-203ENST00000578922 WWC2-AS2Q96NR7 200 aa13.2□□□□□ -0.3
SMG8-203ENST00000578922 NDUFC2-KCTD14E9PQ53 114 aa13.18□□□□□ -0.3
SMG8-203ENST00000578922 CRYGAP11844 174 aa13.18□□□□□ -0.3
SMG8-203ENST00000578922 Q6ZRP5 223 aa13.17□□□□□ -0.3
SMG8-203ENST00000578922 F8WDY8 70 aa13.17□□□□□ -0.3
SMG8-203ENST00000578922 LOC110117498A0A087WWA1 95 aa13.16□□□□□ -0.3
SMG8-203ENST00000578922 RBM3P98179 157 aaKnown RBP13.15□□□□□ -0.3
SMG8-203ENST00000578922 TRBV10-3A0A0K0K1G6 114 aa13.14□□□□□ -0.31
SMG8-203ENST00000578922 UBL5Q9BZL1 73 aa13.14□□□□□ -0.31
SMG8-203ENST00000578922 SMIM20Q8N5G0 67 aa13.14□□□□□ -0.31
SMG8-203ENST00000578922 LY6G6CO95867 125 aa13.13□□□□□ -0.31
SMG8-203ENST00000578922 SERP2Q8N6R1 65 aa13.13□□□□□ -0.31
SMG8-203ENST00000578922 KMT2AQ03164 3969 aa13.13□□□□□ -0.31
SMG8-203ENST00000578922 PDE6GP18545 87 aa13.13□□□□□ -0.31
SMG8-203ENST00000578922 Q6ZQT0 140 aa13.13□□□□□ -0.31
SMG8-203ENST00000578922 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.12□□□□□ -0.31
SMG8-203ENST00000578922 A0A087WVE0 104 aa13.11□□□□□ -0.31
SMG8-203ENST00000578922 GHRHP01286 108 aa13.11□□□□□ -0.31
SMG8-203ENST00000578922 DIRC1Q969H9 104 aa13.11□□□□□ -0.31
SMG8-203ENST00000578922 TRAV23DV6A0A075B6W5 121 aa13.11□□□□□ -0.31
SMG8-203ENST00000578922 TRBV7-6A0A0J9YX20 115 aa13.1□□□□□ -0.31
SMG8-203ENST00000578922 Q6ZRN7 208 aaPredicted RBP13.1□□□□□ -0.31
SMG8-203ENST00000578922 LAMTOR3Q9UHA4 124 aa13.1□□□□□ -0.31
SMG8-203ENST00000578922 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP13.07□□□□□ -0.32
SMG8-203ENST00000578922 Q6ZQY7 126 aa13.07□□□□□ -0.32
SMG8-203ENST00000578922 DSCR8Q96T75 97 aa13.07□□□□□ -0.32
SMG8-203ENST00000578922 LRCOL1A6NCL2 159 aa13.07□□□□□ -0.32
SMG8-203ENST00000578922 ZNF73O43830 326 aaPredicted RBP13.05□□□□□ -0.32
SMG8-203ENST00000578922 VPREB1P12018 145 aa13.05□□□□□ -0.32
SMG8-203ENST00000578922 TLX1NBP0CAT3 122 aa13.05□□□□□ -0.32
SMG8-203ENST00000578922 COX7BP24311 80 aa13.05□□□□□ -0.32
SMG8-203ENST00000578922 Q6ZR54 194 aa13.05□□□□□ -0.32
SMG8-203ENST00000578922 C14orf177Q52M58 125 aa13.04□□□□□ -0.32
SMG8-203ENST00000578922 ELOF1P60002 83 aaKnown RBP13.03□□□□□ -0.32
SMG8-203ENST00000578922 LINC00476Q8WZB0 136 aa13.03□□□□□ -0.32
SMG8-203ENST00000578922 DNAH2Q9P225 4427 aa13.03□□□□□ -0.32
SMG8-203ENST00000578922 M0R378 163 aa13.03□□□□□ -0.32
SMG8-203ENST00000578922 CNBPP62633 177 aaKnown RBP13.02□□□□□ -0.33
SMG8-203ENST00000578922 SERTAD4-AS1Q5TG53 156 aa13.02□□□□□ -0.33
SMG8-203ENST00000578922 LOC107984640A0A0U1RRK4 108 aa13.01□□□□□ -0.33
SMG8-203ENST00000578922 FAM168BA1KXE4 195 aa13.01□□□□□ -0.33
SMG8-203ENST00000578922 BCE1O60756 84 aa13□□□□□ -0.33
SMG8-203ENST00000578922 C3orf84H3BNL1 204 aa13□□□□□ -0.33
SMG8-203ENST00000578922 FAM19A1Q7Z5A9 133 aa13□□□□□ -0.33
SMG8-203ENST00000578922 IGKV2-24A0A0C4DH68 120 aa12.98□□□□□ -0.33
SMG8-203ENST00000578922 TMEM258P61165 79 aa12.97□□□□□ -0.33
SMG8-203ENST00000578922 TRBV7-4A0A0J9YYF1 115 aa12.97□□□□□ -0.33
SMG8-203ENST00000578922 NKAPP1Q8N9T2 125 aa12.97□□□□□ -0.33
SMG8-203ENST00000578922 A0A096LNI7 61 aa12.96□□□□□ -0.33
SMG8-203ENST00000578922 C1orf134Q5TEV5 83 aa12.96□□□□□ -0.33
SMG8-203ENST00000578922 Q6ZVQ6 151 aa12.96□□□□□ -0.33
SMG8-203ENST00000578922 FUSP35637 526 aaKnown RBP eCLIP12.96□□□□□ -0.34
SMG8-203ENST00000578922 RPS28P62857 69 aaKnown RBP12.96□□□□□ -0.34
SMG8-203ENST00000578922 CXCL6P80162 114 aa12.96□□□□□ -0.34
SMG8-203ENST00000578922 A0A087WTM6 91 aa12.95□□□□□ -0.34
SMG8-203ENST00000578922 LINC01547P58512 204 aaPredicted RBP12.95□□□□□ -0.34
SMG8-203ENST00000578922 FAM19A5Q7Z5A7 132 aaPredicted RBP12.95□□□□□ -0.34
SMG8-203ENST00000578922 J3KT08 172 aa12.94□□□□□ -0.34
SMG8-203ENST00000578922 ALMS1Q8TCU4 4167 aa12.93□□□□□ -0.34
SMG8-203ENST00000578922 KRTAP7-1Q8IUC3 87 aa12.93□□□□□ -0.34
SMG8-203ENST00000578922 LINC00528Q8N1L1 170 aa12.93□□□□□ -0.34
SMG8-203ENST00000578922 C7orf33Q8WU49 177 aa12.92□□□□□ -0.34
SMG8-203ENST00000578922 CYSTM1Q9H1C7 97 aa12.92□□□□□ -0.34
SMG8-203ENST00000578922 C16orf90A8MZG2 172 aa12.91□□□□□ -0.34
SMG8-203ENST00000578922 CHTF8P0CG12 524 aa12.91□□□□□ -0.34
SMG8-203ENST00000578922 HAMPP81172 84 aa12.91□□□□□ -0.34
SMG8-203ENST00000578922 C9orf163Q8N9P6 203 aa12.91□□□□□ -0.34
SMG8-203ENST00000578922 PLA2G2DQ9UNK4 145 aa12.9□□□□□ -0.34
SMG8-203ENST00000578922 HYDINQ4G0P3 5121 aa12.89□□□□□ -0.35
SMG8-203ENST00000578922 RPL37AP8A6NKH3 93 aa12.89□□□□□ -0.35
SMG8-203ENST00000578922 DNAH6Q9C0G6 4158 aa12.88□□□□□ -0.35
SMG8-203ENST00000578922 TRAV7A0A075B6U4 112 aa12.87□□□□□ -0.35
SMG8-203ENST00000578922 A0A1W2PNN7 141 aa12.86□□□□□ -0.35
SMG8-203ENST00000578922 IGLV5-37A0A075B6J1 123 aa12.85□□□□□ -0.35
SMG8-203ENST00000578922 KCNQ1DNQ9H478 68 aa12.85□□□□□ -0.35
SMG8-203ENST00000578922 MRPL55Q7Z7F7 128 aaKnown RBP12.84□□□□□ -0.35
SMG8-203ENST00000578922 DNAH17Q9UFH2 4485 aa12.83□□□□□ -0.36
SMG8-203ENST00000578922 TNP2Q05952 138 aa12.83□□□□□ -0.36
SMG8-203ENST00000578922 DPH3Q96FX2 82 aa12.83□□□□□ -0.36
SMG8-203ENST00000578922 HECTD4Q9Y4D8 3996 aa12.83□□□□□ -0.36
SMG8-203ENST00000578922 RTL8CO15255 209 aa12.82□□□□□ -0.36
SMG8-203ENST00000578922 PANO1I0J062 215 aa12.81□□□□□ -0.36
SMG8-203ENST00000578922 IGLV1-50A0A075B6I6 118 aa12.8□□□□□ -0.36
SMG8-203ENST00000578922 C20orf197Q8N268 126 aa12.79□□□□□ -0.36
SMG8-203ENST00000578922 FRAS1Q86XX4 4008 aa12.77□□□□□ -0.37
SMG8-203ENST00000578922 IGLV5-52A0A0A0MRZ9 124 aa12.77□□□□□ -0.37
SMG8-203ENST00000578922 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.76□□□□□ -0.37
SMG8-203ENST00000578922 PKIGQ9Y2B9 76 aa12.76□□□□□ -0.37
SMG8-203ENST00000578922 PHF5AQ7RTV0 110 aaKnown RBP12.75□□□□□ -0.37
SMG8-203ENST00000578922 DHRS4-AS1Q9P1J3 65 aa12.75□□□□□ -0.37
SMG8-203ENST00000578922 PRYO14603 147 aa12.73□□□□□ -0.37
SMG8-203ENST00000578922 KLKP1Q107X0 134 aa12.73□□□□□ -0.37
SMG8-203ENST00000578922 LINC00474Q9P2X8 69 aa12.73□□□□□ -0.37
SMG8-203ENST00000578922 SACSQ9NZJ4 4579 aa12.73□□□□□ -0.37
SMG8-203ENST00000578922 A0A1B0GW54 56 aa12.73□□□□□ -0.37
SMG8-203ENST00000578922 IGLV5-48A0A075B6I7 105 aa12.71□□□□□ -0.37
SMG8-203ENST00000578922 Q8N377 158 aa12.71□□□□□ -0.37
SMG8-203ENST00000578922 SPACA4Q8TDM5 124 aa12.71□□□□□ -0.37
SMG8-203ENST00000578922 ETDCA0A1B0GVM5 59 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms