RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 RPL39P62891 51 aaKnown RBP0.4□□□□□ -2.35
COPS3-213ENST00000577210 WT1-ASQ06250 92 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 NREPQ16612 68 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 RPL39P5Q59GN2 51 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 TMEM167AQ8TBQ9 72 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 SMR3AQ99954 134 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 SMIM2Q9BVW6 85 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 KRTAP2-4Q9BYR9 128 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 KRTAP2-1Q9BYU5 128 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 UBL5Q9BZL1 73 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 KIAA1551Q9HCM1 1747 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 BTAF1O14981 1849 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 SBF2Q86WG5 1849 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 SPTBN2O15020 2390 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 SPTBN1Q01082 2364 aaKnown RBP0.4□□□□□ -2.35
COPS3-213ENST00000577210 NAV3Q8IVL0 2385 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 NAV2Q8IVL1 2488 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 TTC28Q96AY4 2481 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 CLTCQ00610 1675 aaKnown RBP0.4□□□□□ -2.35
COPS3-213ENST00000577210 DNAJC13O75165 2243 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 TNCP24821 2201 aa0.4□□□□□ -2.35
COPS3-213ENST00000577210 KNL1Q8NG31 2342 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 PAPPAQ13219 1627 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 ALKQ9UM73 1620 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 DOPEY2Q9Y3R5 2298 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 NRXN3Q9Y4C0 1643 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 TPRP12270 2363 aaKnown RBP0.39□□□□□ -2.35
COPS3-213ENST00000577210 POLR1AO95602 1720 aaPredicted RBP0.39□□□□□ -2.35
COPS3-213ENST00000577210 ETDCA0A1B0GVM5 59 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 DEFB108AA8MXU0 73 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 K7EIM0 57 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 M0QY20 66 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 PI4KAP42356 2102 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 LINC00158P58513 81 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 KLK9Q2XQG4 91 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 DEFB114Q30KQ6 69 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 LEAP2Q969E1 77 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 RPL39LQ96EH5 51 aaKnown RBP0.39□□□□□ -2.35
COPS3-213ENST00000577210 SPRR4Q96PI1 79 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 KCNQ1DNQ9H478 68 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 CDKN2A-AS1Q9UH64 79 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 SPTA1P02549 2419 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 PREX1Q8TCU6 1659 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 FBN2P35556 2912 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 A0A1B0GUL6 1792 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 AKAP12Q02952 1782 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 KDM3BQ7LBC6 1761 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 TENM3Q9P273 2699 aa0.39□□□□□ -2.35
COPS3-213ENST00000577210 NUP188Q5SRE5 1749 aa0.38□□□□□ -2.35
COPS3-213ENST00000577210 PKD1L3Q7Z443 1732 aa0.38□□□□□ -2.35
COPS3-213ENST00000577210 MYO5CQ9NQX4 1742 aa0.38□□□□□ -2.35
COPS3-213ENST00000577210 MARF1Q9Y4F3 1742 aaKnown RBP0.38□□□□□ -2.35
COPS3-213ENST00000577210 PIEZO2Q9H5I5 2752 aa0.38□□□□□ -2.35
COPS3-213ENST00000577210 CFAP43Q8NDM7 1665 aa0.38□□□□□ -2.35
COPS3-213ENST00000577210 ALS2Q96Q42 1657 aa0.38□□□□□ -2.35
COPS3-213ENST00000577210 NDUFB1O75438 58 aa0.38□□□□□ -2.35
COPS3-213ENST00000577210 DEFB104AQ8WTQ1 72 aa0.38□□□□□ -2.35
COPS3-213ENST00000577210 GAFA1Q96PS6 74 aa0.38□□□□□ -2.35
COPS3-213ENST00000577210 Q9Y3F1 56 aa0.38□□□□□ -2.35
COPS3-213ENST00000577210 BDP1A6H8Y1 2624 aa0.38□□□□□ -2.35
COPS3-213ENST00000577210 APC2O95996 2303 aa0.38□□□□□ -2.35
COPS3-213ENST00000577210 PTPRZ1P23471 2315 aaPredicted RBP0.38□□□□□ -2.35
COPS3-213ENST00000577210 CACNA1EQ15878 2313 aa0.38□□□□□ -2.35
COPS3-213ENST00000577210 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.38□□□□□ -2.353e-6■■■■■ 46.6
COPS3-213ENST00000577210 C4AP0C0L4 1744 aa0.38□□□□□ -2.35
COPS3-213ENST00000577210 C4BP0C0L5 1744 aa0.38□□□□□ -2.35
COPS3-213ENST00000577210 ITSN1Q15811 1721 aa0.38□□□□□ -2.35
COPS3-213ENST00000577210 QSER1Q2KHR3 1735 aa0.38□□□□□ -2.35
COPS3-213ENST00000577210 TIAM2Q8IVF5 1701 aa0.38□□□□□ -2.35
COPS3-213ENST00000577210 ANKRD26Q9UPS8 1709 aa0.38□□□□□ -2.35
COPS3-213ENST00000577210 CCDC168Q8NDH2 2452 aa0.38□□□□□ -2.35
COPS3-213ENST00000577210 CNOT1A5YKK6 2376 aaKnown RBP0.38□□□□□ -2.35
COPS3-213ENST00000577210 FAM186AA6NE01 2351 aa0.38□□□□□ -2.35
COPS3-213ENST00000577210 ZFHX3Q15911 3703 aa0.37□□□□□ -2.35
COPS3-213ENST00000577210 USF3Q68DE3 2245 aa0.37□□□□□ -2.35
COPS3-213ENST00000577210 ANKRD36A6QL64 1941 aa0.37□□□□□ -2.35
COPS3-213ENST00000577210 MYH4Q9Y623 1939 aa0.37□□□□□ -2.35
COPS3-213ENST00000577210 NBASA2RRP1 2371 aa0.37□□□□□ -2.35
COPS3-213ENST00000577210 CACNA1HO95180 2353 aa0.37□□□□□ -2.35
COPS3-213ENST00000577210 IGLV5-48A0A075B6I7 105 aa0.37□□□□□ -2.35
COPS3-213ENST00000577210 DEFB131BA0A096LNP1 70 aa0.37□□□□□ -2.35
COPS3-213ENST00000577210 H0Y9P7 68 aa0.37□□□□□ -2.35
COPS3-213ENST00000577210 NDUFA4O00483 81 aa0.37□□□□□ -2.35
COPS3-213ENST00000577210 MRPL33O75394 65 aaKnown RBP0.37□□□□□ -2.35
COPS3-213ENST00000577210 COX7BP24311 80 aa0.37□□□□□ -2.35
COPS3-213ENST00000577210 CD52P31358 61 aa0.37□□□□□ -2.35
COPS3-213ENST00000577210 Q8IZM0 81 aa0.37□□□□□ -2.35
COPS3-213ENST00000577210 PRO3102Q9H379 93 aa0.37□□□□□ -2.35
COPS3-213ENST00000577210 TP53AIP1Q9HCN2 124 aa0.37□□□□□ -2.35
COPS3-213ENST00000577210 PKDREJQ9NTG1 2253 aa0.37□□□□□ -2.35
COPS3-213ENST00000577210 XRN1Q8IZH2 1706 aaKnown RBP0.37□□□□□ -2.35
COPS3-213ENST00000577210 DOCK11Q5JSL3 2073 aa0.37□□□□□ -2.35
COPS3-213ENST00000577210 COL4A6Q14031 1691 aa0.37□□□□□ -2.35
COPS3-213ENST00000577210 ACANP16112 2415 aa0.36□□□□□ -2.35
COPS3-213ENST00000577210 DDX60LQ5H9U9 1706 aaKnown RBP0.36□□□□□ -2.35
COPS3-213ENST00000577210 MON2Q7Z3U7 1717 aa0.36□□□□□ -2.35
COPS3-213ENST00000577210 AKAP6Q13023 2319 aa0.36□□□□□ -2.35
COPS3-213ENST00000577210 CELSR2Q9HCU4 2923 aa0.36□□□□□ -2.35
COPS3-213ENST00000577210 A8MTW9 85 aa0.36□□□□□ -2.35
COPS3-213ENST00000577210 DEFB112Q30KQ8 113 aa0.36□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 376.5 ms