RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	NKAPP1	Q8N9T2	125 aa		9.76	□□□□□ -0.85
PRPF8-216	ENST00000577001	PRR34	Q9NV39	138 aa		9.76	□□□□□ -0.85
PRPF8-216	ENST00000577001	TM2D3	Q9BRN9	247 aa		9.76	□□□□□ -0.85
PRPF8-216	ENST00000577001	VPREB1	P12018	145 aa		9.76	□□□□□ -0.85
PRPF8-216	ENST00000577001	C11orf45	Q8TAV5	145 aa		9.76	□□□□□ -0.85
PRPF8-216	ENST00000577001	C4orf26	Q17RF5	130 aa		9.74	□□□□□ -0.85
PRPF8-216	ENST00000577001		A0A096LNI7	61 aa		9.74	□□□□□ -0.85
PRPF8-216	ENST00000577001	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	9.73	□□□□□ -0.85
PRPF8-216	ENST00000577001	SYCN	Q0VAF6	134 aa		9.73	□□□□□ -0.85
PRPF8-216	ENST00000577001	FUS	P35637	526 aa	Known RBP eCLIP	9.73	□□□□□ -0.85
PRPF8-216	ENST00000577001	CRYGA	P11844	174 aa		9.72	□□□□□ -0.85
PRPF8-216	ENST00000577001	LINC00167	Q96N53	147 aa		9.72	□□□□□ -0.85
PRPF8-216	ENST00000577001	HRCT1	Q6UXD1	115 aa		9.72	□□□□□ -0.85
PRPF8-216	ENST00000577001	KRTAP24-1	Q3LI83	254 aa		9.71	□□□□□ -0.86
PRPF8-216	ENST00000577001	C7orf33	Q8WU49	177 aa		9.71	□□□□□ -0.86
PRPF8-216	ENST00000577001	DPH3	Q96FX2	82 aa		9.71	□□□□□ -0.86
PRPF8-216	ENST00000577001	NDUFC2-KCTD14	E9PQ53	114 aa		9.69	□□□□□ -0.86
PRPF8-216	ENST00000577001		J3KT08	172 aa		9.69	□□□□□ -0.86
PRPF8-216	ENST00000577001	LRCOL1	A6NCL2	159 aa		9.69	□□□□□ -0.86
PRPF8-216	ENST00000577001	UBE2B	P63146	152 aa		9.68	□□□□□ -0.86
PRPF8-216	ENST00000577001	DNAH10	Q8IVF4	4471 aa		9.68	□□□□□ -0.86
PRPF8-216	ENST00000577001		M0R378	163 aa		9.68	□□□□□ -0.86
PRPF8-216	ENST00000577001	PRR4	Q16378	134 aa		9.68	□□□□□ -0.86
PRPF8-216	ENST00000577001	ERC2-IT1	O76042	136 aa		9.67	□□□□□ -0.86
PRPF8-216	ENST00000577001		F8WEM9	126 aa		9.67	□□□□□ -0.86
PRPF8-216	ENST00000577001	ELOF1	P60002	83 aa	Known RBP	9.67	□□□□□ -0.86
PRPF8-216	ENST00000577001	NREP	Q16612	68 aa		9.67	□□□□□ -0.86
PRPF8-216	ENST00000577001	KRTAP26-1	Q6PEX3	210 aa		9.66	□□□□□ -0.86
PRPF8-216	ENST00000577001	FAM30A	Q9NZY2	134 aa		9.65	□□□□□ -0.86
PRPF8-216	ENST00000577001	EGFEM1P	Q0D2K5	195 aa		9.65	□□□□□ -0.87
PRPF8-216	ENST00000577001	PRLH	P81277	87 aa		9.64	□□□□□ -0.87
PRPF8-216	ENST00000577001	LINC00528	Q8N1L1	170 aa		9.63	□□□□□ -0.87
PRPF8-216	ENST00000577001	LINC00588	Q9Y4M8	146 aa		9.63	□□□□□ -0.87
PRPF8-216	ENST00000577001	ETDC	A0A1B0GVM5	59 aa		9.62	□□□□□ -0.87
PRPF8-216	ENST00000577001	HIGD2A	Q9BW72	106 aa		9.62	□□□□□ -0.87
PRPF8-216	ENST00000577001		Q8N377	158 aa		9.62	□□□□□ -0.87
PRPF8-216	ENST00000577001	CHTF8	P0CG12	524 aa		9.61	□□□□□ -0.87
PRPF8-216	ENST00000577001	SVIP	Q8NHG7	77 aa		9.6	□□□□□ -0.87
PRPF8-216	ENST00000577001	LINC00474	Q9P2X8	69 aa		9.6	□□□□□ -0.87
PRPF8-216	ENST00000577001	LOC110117498	A0A087WWA1	95 aa		9.59	□□□□□ -0.87
PRPF8-216	ENST00000577001		Q9BRP9	147 aa		9.59	□□□□□ -0.87
PRPF8-216	ENST00000577001	TRBV7-4	A0A0J9YYF1	115 aa		9.58	□□□□□ -0.88
PRPF8-216	ENST00000577001	FAM236D	A0A1B0GTK5	79 aa		9.58	□□□□□ -0.88
PRPF8-216	ENST00000577001	FAM236C	P0DP71	79 aa		9.58	□□□□□ -0.88
PRPF8-216	ENST00000577001	MPLKIP	Q8TAP9	179 aa		9.58	□□□□□ -0.88
PRPF8-216	ENST00000577001	TMEM258	P61165	79 aa		9.58	□□□□□ -0.88
PRPF8-216	ENST00000577001	GVQW2	A0A096LPI5	108 aa	Predicted RBP	9.56	□□□□□ -0.88
PRPF8-216	ENST00000577001		H7BZZ5	65 aa		9.56	□□□□□ -0.88
PRPF8-216	ENST00000577001	PSCA	O43653	123 aa		9.55	□□□□□ -0.88
PRPF8-216	ENST00000577001	KRTAP7-1	Q8IUC3	87 aa		9.55	□□□□□ -0.88
PRPF8-216	ENST00000577001	ATP5EP2	Q5VTU8	51 aa		9.55	□□□□□ -0.88
PRPF8-216	ENST00000577001	RPL37A	P61513	92 aa	Known RBP	9.55	□□□□□ -0.88
PRPF8-216	ENST00000577001	SMIM29	Q86T20	159 aa		9.54	□□□□□ -0.88
PRPF8-216	ENST00000577001	TRAV7	A0A075B6U4	112 aa		9.54	□□□□□ -0.88
PRPF8-216	ENST00000577001	C1orf137	Q5JT78	98 aa		9.54	□□□□□ -0.88
PRPF8-216	ENST00000577001	WFDC13	Q8IUB5	93 aa		9.54	□□□□□ -0.88
PRPF8-216	ENST00000577001	LINC01556	Q5JQF7	62 aa		9.53	□□□□□ -0.88
PRPF8-216	ENST00000577001		A0A1W2PNM2	257 aa		9.53	□□□□□ -0.88
PRPF8-216	ENST00000577001	KRTAP1-5	Q9BYS1	174 aa		9.51	□□□□□ -0.89
PRPF8-216	ENST00000577001	IGKV4-1	P06312	121 aa		9.51	□□□□□ -0.89
PRPF8-216	ENST00000577001	TG	P01266	2768 aa		9.5	□□□□□ -0.89
PRPF8-216	ENST00000577001	UBE2DNL	Q8IWF7	75 aa		9.49	□□□□□ -0.89
PRPF8-216	ENST00000577001	TMEM254	Q8TBM7	123 aa		9.49	□□□□□ -0.89
PRPF8-216	ENST00000577001	MRPL55	Q7Z7F7	128 aa	Known RBP	9.48	□□□□□ -0.89
PRPF8-216	ENST00000577001		K7EQZ3	153 aa		9.48	□□□□□ -0.89
PRPF8-216	ENST00000577001		Q6ZRX8	168 aa		9.47	□□□□□ -0.89
PRPF8-216	ENST00000577001	FAM229B	Q4G0N7	80 aa		9.47	□□□□□ -0.89
PRPF8-216	ENST00000577001	PHF5A	Q7RTV0	110 aa	Known RBP	9.47	□□□□□ -0.89
PRPF8-216	ENST00000577001		Q5XG85	94 aa		9.46	□□□□□ -0.89
PRPF8-216	ENST00000577001		K7EIL1	84 aa		9.46	□□□□□ -0.9
PRPF8-216	ENST00000577001	DNAH10OS	P0CZ25	163 aa		9.46	□□□□□ -0.9
PRPF8-216	ENST00000577001	PDE6G	P18545	87 aa		9.46	□□□□□ -0.9
PRPF8-216	ENST00000577001	KCNQ1DN	Q9H478	68 aa		9.46	□□□□□ -0.9
PRPF8-216	ENST00000577001	IGLV1-50	A0A075B6I6	118 aa		9.45	□□□□□ -0.9
PRPF8-216	ENST00000577001	CXCL6	P80162	114 aa		9.45	□□□□□ -0.9
PRPF8-216	ENST00000577001	KRTAP11-1	Q8IUC1	163 aa		9.45	□□□□□ -0.9
PRPF8-216	ENST00000577001	CMYA5	Q8N3K9	4069 aa		9.45	□□□□□ -0.9
PRPF8-216	ENST00000577001		A0A087WSZ3	146 aa		9.45	□□□□□ -0.9
PRPF8-216	ENST00000577001	HUWE1	Q7Z6Z7	4374 aa	Known RBP	9.42	□□□□□ -0.9
PRPF8-216	ENST00000577001	LINC00476	Q8WZB0	136 aa		9.42	□□□□□ -0.9
PRPF8-216	ENST00000577001		A0A0U1RQV1	116 aa		9.41	□□□□□ -0.9
PRPF8-216	ENST00000577001	TRBV7-6	A0A0J9YX20	115 aa		9.41	□□□□□ -0.9
PRPF8-216	ENST00000577001	REG3G	Q6UW15	175 aa		9.41	□□□□□ -0.9
PRPF8-216	ENST00000577001	DNAH7	Q8WXX0	4024 aa		9.4	□□□□□ -0.9
PRPF8-216	ENST00000577001	DNAH9	Q9NYC9	4486 aa		9.4	□□□□□ -0.91
PRPF8-216	ENST00000577001	ANAPC11	Q9NYG5	84 aa		9.38	□□□□□ -0.91
PRPF8-216	ENST00000577001	LINC00336	Q6ZUF6	198 aa		9.38	□□□□□ -0.91
PRPF8-216	ENST00000577001		H3BNG1	76 aa		9.37	□□□□□ -0.91
PRPF8-216	ENST00000577001	C5orf47	Q569G3	176 aa		9.37	□□□□□ -0.91
PRPF8-216	ENST00000577001	FP248	Q71RG6	208 aa	Predicted RBP	9.37	□□□□□ -0.91
PRPF8-216	ENST00000577001	PANO1	I0J062	215 aa		9.36	□□□□□ -0.91
PRPF8-216	ENST00000577001	RPS28	P62857	69 aa	Known RBP	9.36	□□□□□ -0.91
PRPF8-216	ENST00000577001	DHRS4-AS1	Q9P1J3	65 aa		9.36	□□□□□ -0.91
PRPF8-216	ENST00000577001	PKIG	Q9Y2B9	76 aa		9.36	□□□□□ -0.91
PRPF8-216	ENST00000577001	DSCR10	P59022	87 aa		9.36	□□□□□ -0.91
PRPF8-216	ENST00000577001	KLKP1	Q107X0	134 aa		9.36	□□□□□ -0.91
PRPF8-216	ENST00000577001	UBE2A	P49459	152 aa		9.36	□□□□□ -0.91
PRPF8-216	ENST00000577001	PRY	O14603	147 aa		9.35	□□□□□ -0.91
PRPF8-216	ENST00000577001	IGFL1	Q6UW32	110 aa		9.35	□□□□□ -0.91
PRPF8-216	ENST00000577001	IGLV9-49	A0A0B4J1Y8	123 aa		9.35	□□□□□ -0.91

Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms