RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 HIST3H2BBQ8N257 126 aa7.36□□□□□ -1.23
NPLOC4-213ENST00000573519 LINC00308Q8TCZ7 52 aa7.36□□□□□ -1.23
NPLOC4-213ENST00000573519 TIMM17BO60830 172 aa7.35□□□□□ -1.23
NPLOC4-213ENST00000573519 IGLV6-57P01721 117 aa7.35□□□□□ -1.23
NPLOC4-213ENST00000573519 B5MCH6 92 aa7.34□□□□□ -1.23
NPLOC4-213ENST00000573519 HIST1H2BLQ99880 126 aa7.34□□□□□ -1.23
NPLOC4-213ENST00000573519 S100A2P29034 98 aa7.33□□□□□ -1.24
NPLOC4-213ENST00000573519 C4orf48Q5BLP8 95 aa7.33□□□□□ -1.24
NPLOC4-213ENST00000573519 GAGE2AQ6NT46 116 aa7.33□□□□□ -1.24
NPLOC4-213ENST00000573519 TRAV23DV6A0A075B6W5 121 aa7.32□□□□□ -1.24
NPLOC4-213ENST00000573519 ERC2-IT1O76042 136 aa7.32□□□□□ -1.24
NPLOC4-213ENST00000573519 SCGB1D4Q6XE38 83 aa7.32□□□□□ -1.24
NPLOC4-213ENST00000573519 PCP2Q8IVA1 136 aa7.32□□□□□ -1.24
NPLOC4-213ENST00000573519 SPANXCQ9NY87 97 aa7.32□□□□□ -1.24
NPLOC4-213ENST00000573519 S100A6P06703 90 aa7.31□□□□□ -1.24
NPLOC4-213ENST00000573519 SPAG11AQ6PDA7 123 aa7.31□□□□□ -1.24
NPLOC4-213ENST00000573519 Q8NBF4 154 aa7.31□□□□□ -1.24
NPLOC4-213ENST00000573519 OR13C6PQ8NH95 151 aa7.31□□□□□ -1.24
NPLOC4-213ENST00000573519 Q9BRP9 147 aa7.31□□□□□ -1.24
NPLOC4-213ENST00000573519 IGLV7-46A0A075B6I9 117 aa7.3□□□□□ -1.24
NPLOC4-213ENST00000573519 ZNF73O43830 326 aaPredicted RBP7.3□□□□□ -1.24
NPLOC4-213ENST00000573519 CTAG1AP78358 180 aa7.3□□□□□ -1.24
NPLOC4-213ENST00000573519 Q6ZRX8 168 aa7.3□□□□□ -1.24
NPLOC4-213ENST00000573519 IGLV9-49A0A0B4J1Y8 123 aa7.29□□□□□ -1.24
NPLOC4-213ENST00000573519 SNRPEP62304 92 aaKnown RBP7.29□□□□□ -1.24
NPLOC4-213ENST00000573519 CDIP1Q9H305 208 aa7.29□□□□□ -1.24
NPLOC4-213ENST00000573519 AKR1D1P51857 326 aa7.28□□□□□ -1.24
NPLOC4-213ENST00000573519 JOSD1Q15040 202 aaPredicted RBP7.28□□□□□ -1.24
NPLOC4-213ENST00000573519 LINC00483Q53H64 154 aa7.28□□□□□ -1.24
NPLOC4-213ENST00000573519 SPANXDQ9BXN6 97 aa7.28□□□□□ -1.24
NPLOC4-213ENST00000573519 MOBPQ13875 183 aa7.27□□□□□ -1.25
NPLOC4-213ENST00000573519 HINT1P49773 126 aaPredicted RBP7.26□□□□□ -1.25
NPLOC4-213ENST00000573519 TPRXLQ17RH7 258 aa7.26□□□□□ -1.25
NPLOC4-213ENST00000573519 MUSTN1Q8IVN3 82 aa7.26□□□□□ -1.25
NPLOC4-213ENST00000573519 MUC2Q02817 5179 aa7.25□□□□□ -1.25
NPLOC4-213ENST00000573519 LINC00518Q8N0U6 118 aa7.25□□□□□ -1.25
NPLOC4-213ENST00000573519 CBY1Q9Y3M2 126 aa7.25□□□□□ -1.25
NPLOC4-213ENST00000573519 HSBP1L1C9JCN9 74 aa7.24□□□□□ -1.25
NPLOC4-213ENST00000573519 IFITM1P13164 125 aa7.24□□□□□ -1.25
NPLOC4-213ENST00000573519 ST20-AS1Q8NBB2 130 aa7.24□□□□□ -1.25
NPLOC4-213ENST00000573519 C5orf52A6NGY3 159 aa7.23□□□□□ -1.25
NPLOC4-213ENST00000573519 SCGB1D1O95968 90 aa7.23□□□□□ -1.25
NPLOC4-213ENST00000573519 SPINK1P00995 79 aa7.23□□□□□ -1.25
NPLOC4-213ENST00000573519 C9orf153Q5TBE3 101 aa7.23□□□□□ -1.25
NPLOC4-213ENST00000573519 A0A0U1RQV1 116 aa7.22□□□□□ -1.25
NPLOC4-213ENST00000573519 Q6ZVH6 145 aa7.22□□□□□ -1.25
NPLOC4-213ENST00000573519 SSBP3-AS1Q7Z2R9 100 aa7.22□□□□□ -1.25
NPLOC4-213ENST00000573519 COPS9Q8WXC6 57 aa7.22□□□□□ -1.25
NPLOC4-213ENST00000573519 A6NDN8 102 aa7.21□□□□□ -1.26
NPLOC4-213ENST00000573519 COX7BP24311 80 aa7.21□□□□□ -1.26
NPLOC4-213ENST00000573519 C6orf99Q4VX62 202 aa7.21□□□□□ -1.26
NPLOC4-213ENST00000573519 FP248Q71RG6 208 aaPredicted RBP7.21□□□□□ -1.26
NPLOC4-213ENST00000573519 ELOF1P60002 83 aaKnown RBP7.18□□□□□ -1.26
NPLOC4-213ENST00000573519 DHRS4-AS1Q9P1J3 65 aa7.18□□□□□ -1.26
NPLOC4-213ENST00000573519 RPS29P62273 56 aaKnown RBP7.16□□□□□ -1.26
NPLOC4-213ENST00000573519 Q8N377 158 aa7.16□□□□□ -1.26
NPLOC4-213ENST00000573519 TRAV13-2A0A0B4J235 113 aa7.15□□□□□ -1.26
NPLOC4-213ENST00000573519 SLC25A20O43772 301 aa7.15□□□□□ -1.26
NPLOC4-213ENST00000573519 KRTAP13-3Q3SY46 172 aa7.15□□□□□ -1.26
NPLOC4-213ENST00000573519 SLC25A34Q6PIV7 304 aa7.15□□□□□ -1.26
NPLOC4-213ENST00000573519 DEFB105AQ8NG35 78 aa7.15□□□□□ -1.26
NPLOC4-213ENST00000573519 A4D1N5 150 aa7.14□□□□□ -1.27
NPLOC4-213ENST00000573519 COX8AP10176 69 aa7.14□□□□□ -1.27
NPLOC4-213ENST00000573519 MUC17Q685J3 4493 aa7.14□□□□□ -1.27
NPLOC4-213ENST00000573519 SMIM11BQ8TCY0 68 aa7.14□□□□□ -1.27
NPLOC4-213ENST00000573519 TRBV7-6A0A0J9YX20 115 aa7.13□□□□□ -1.27
NPLOC4-213ENST00000573519 SPRR1BP22528 89 aa7.13□□□□□ -1.27
NPLOC4-213ENST00000573519 TAL2Q16559 108 aa7.13□□□□□ -1.27
NPLOC4-213ENST00000573519 HRCT1Q6UXD1 115 aa7.13□□□□□ -1.27
NPLOC4-213ENST00000573519 C14orf144Q96I85 54 aa7.13□□□□□ -1.27
NPLOC4-213ENST00000573519 LAMTOR3Q9UHA4 124 aa7.13□□□□□ -1.27
NPLOC4-213ENST00000573519 A0A1B0GWB2 263 aa7.12□□□□□ -1.27
NPLOC4-213ENST00000573519 HIST1H4GQ99525 98 aa7.12□□□□□ -1.27
NPLOC4-213ENST00000573519 C12orf57Q99622 126 aa7.12□□□□□ -1.27
NPLOC4-213ENST00000573519 PAM16Q9Y3D7 125 aa7.12□□□□□ -1.27
NPLOC4-213ENST00000573519 Q1RN00 199 aa7.11□□□□□ -1.27
NPLOC4-213ENST00000573519 SPATA45Q537H7 98 aa7.11□□□□□ -1.27
NPLOC4-213ENST00000573519 DLEU1O43261 78 aa7.09□□□□□ -1.27
NPLOC4-213ENST00000573519 VAMP8Q9BV40 100 aa7.09□□□□□ -1.27
NPLOC4-213ENST00000573519 TEX49A0A1B0GTD5 131 aa7.08□□□□□ -1.28
NPLOC4-213ENST00000573519 LINC01547P58512 204 aaPredicted RBP7.08□□□□□ -1.28
NPLOC4-213ENST00000573519 LIMD2Q9BT23 127 aa7.08□□□□□ -1.28
NPLOC4-213ENST00000573519 SMIM29Q86T20 159 aa7.07□□□□□ -1.28
NPLOC4-213ENST00000573519 TMA7Q9Y2S6 64 aaKnown RBP7.07□□□□□ -1.28
NPLOC4-213ENST00000573519 VAMP3Q15836 100 aa7.06□□□□□ -1.28
NPLOC4-213ENST00000573519 ASB16-AS1Q495Z4 193 aa7.06□□□□□ -1.28
NPLOC4-213ENST00000573519 PRO1933Q9H354 126 aa7.06□□□□□ -1.28
NPLOC4-213ENST00000573519 IGLV5-48A0A075B6I7 105 aa7.05□□□□□ -1.28
NPLOC4-213ENST00000573519 H7C2G1 150 aa7.05□□□□□ -1.28
NPLOC4-213ENST00000573519 SEC61BP60468 96 aaKnown RBP7.05□□□□□ -1.28
NPLOC4-213ENST00000573519 LINC00575Q6W349 94 aa7.05□□□□□ -1.28
NPLOC4-213ENST00000573519 C2orf91Q6ZV80 131 aa7.05□□□□□ -1.28
NPLOC4-213ENST00000573519 NHP2Q9NX24 153 aaKnown RBP7.05□□□□□ -1.28
NPLOC4-213ENST00000573519 A0A0G2JQZ4 141 aa7.04□□□□□ -1.28
NPLOC4-213ENST00000573519 CFC1BP0CG36 223 aa7.03□□□□□ -1.28
NPLOC4-213ENST00000573519 CFC1P0CG37 223 aa7.03□□□□□ -1.28
NPLOC4-213ENST00000573519 HIGD1BQ9P298 99 aa7.03□□□□□ -1.28
NPLOC4-213ENST00000573519 hADV29S1A0JD25 119 aa7.02□□□□□ -1.29
NPLOC4-213ENST00000573519 PYY3Q5JQD4 70 aa7.02□□□□□ -1.29
NPLOC4-213ENST00000573519 XP32Q5T750 250 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms