RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 DNAH7Q8WXX0 4024 aa11.7□□□□□ -0.54
SMPD3-211ENST00000568373 CCKP06307 115 aa11.7□□□□□ -0.54
SMPD3-211ENST00000568373 TRBV7-7A0A0K0K1E9 115 aa11.69□□□□□ -0.54
SMPD3-211ENST00000568373 LAMTOR3Q9UHA4 124 aa11.68□□□□□ -0.54
SMPD3-211ENST00000568373 GHRHP01286 108 aa11.67□□□□□ -0.54
SMPD3-211ENST00000568373 KRTAP7-1Q8IUC3 87 aa11.67□□□□□ -0.54
SMPD3-211ENST00000568373 CNBPP62633 177 aaKnown RBP11.67□□□□□ -0.54
SMPD3-211ENST00000568373 RBM3P98179 157 aaKnown RBP11.66□□□□□ -0.54
SMPD3-211ENST00000568373 LINC00846Q9NV44 126 aa11.66□□□□□ -0.54
SMPD3-211ENST00000568373 ANAPC13Q9BS18 74 aa11.66□□□□□ -0.54
SMPD3-211ENST00000568373 IGLV1-50A0A075B6I6 118 aa11.65□□□□□ -0.54
SMPD3-211ENST00000568373 NBDYA0A0U1RRE5 68 aa11.64□□□□□ -0.55
SMPD3-211ENST00000568373 RPL37AP8A6NKH3 93 aa11.64□□□□□ -0.55
SMPD3-211ENST00000568373 IMUPQ9GZP8 106 aa11.64□□□□□ -0.55
SMPD3-211ENST00000568373 PRYO14603 147 aa11.63□□□□□ -0.55
SMPD3-211ENST00000568373 C14orf177Q52M58 125 aa11.63□□□□□ -0.55
SMPD3-211ENST00000568373 FAM19A5Q7Z5A7 132 aaPredicted RBP11.63□□□□□ -0.55
SMPD3-211ENST00000568373 LOC110117498A0A087WWA1 95 aa11.63□□□□□ -0.55
SMPD3-211ENST00000568373 MRPL55Q7Z7F7 128 aaKnown RBP11.63□□□□□ -0.55
SMPD3-211ENST00000568373 STARD9Q9P2P6 4700 aa11.62□□□□□ -0.55
SMPD3-211ENST00000568373 Q6ZQT0 140 aa11.61□□□□□ -0.55
SMPD3-211ENST00000568373 VPS13DQ5THJ4 4388 aa11.61□□□□□ -0.55
SMPD3-211ENST00000568373 C16orf90A8MZG2 172 aa11.61□□□□□ -0.55
SMPD3-211ENST00000568373 KRTAP4-16G5E9R7 235 aaPredicted RBP11.61□□□□□ -0.55
SMPD3-211ENST00000568373 SPRR1AP35321 89 aa11.61□□□□□ -0.55
SMPD3-211ENST00000568373 A0A096LNI7 61 aa11.59□□□□□ -0.55
SMPD3-211ENST00000568373 NDUFV3P56181 108 aaKnown RBP11.59□□□□□ -0.55
SMPD3-211ENST00000568373 DSCR8Q96T75 97 aa11.59□□□□□ -0.55
SMPD3-211ENST00000568373 Q6ZRX8 168 aa11.59□□□□□ -0.55
SMPD3-211ENST00000568373 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.58□□□□□ -0.56
SMPD3-211ENST00000568373 B5MCH6 92 aa11.58□□□□□ -0.56
SMPD3-211ENST00000568373 PDE6GP18545 87 aa11.57□□□□□ -0.56
SMPD3-211ENST00000568373 IGKV2-24A0A0C4DH68 120 aa11.56□□□□□ -0.56
SMPD3-211ENST00000568373 ETDCA0A1B0GVM5 59 aa11.56□□□□□ -0.56
SMPD3-211ENST00000568373 LRCOL1A6NCL2 159 aa11.56□□□□□ -0.56
SMPD3-211ENST00000568373 Q6JHZ5 121 aa11.56□□□□□ -0.56
SMPD3-211ENST00000568373 DHRS4-AS1Q9P1J3 65 aa11.56□□□□□ -0.56
SMPD3-211ENST00000568373 Q6ZRN7 208 aaPredicted RBP11.56□□□□□ -0.56
SMPD3-211ENST00000568373 Q9BRP9 147 aa11.55□□□□□ -0.56
SMPD3-211ENST00000568373 TRBV7-4A0A0J9YYF1 115 aa11.54□□□□□ -0.56
SMPD3-211ENST00000568373 A0A1W2PNN7 141 aa11.52□□□□□ -0.57
SMPD3-211ENST00000568373 SS18L2Q9UHA2 77 aa11.52□□□□□ -0.57
SMPD3-211ENST00000568373 M0R2N4 97 aa11.51□□□□□ -0.57
SMPD3-211ENST00000568373 REG3GQ6UW15 175 aa11.51□□□□□ -0.57
SMPD3-211ENST00000568373 IGKV3D-7A0A0C4DH55 119 aa11.51□□□□□ -0.57
SMPD3-211ENST00000568373 Q8N377 158 aa11.5□□□□□ -0.57
SMPD3-211ENST00000568373 C9orf163Q8N9P6 203 aa11.5□□□□□ -0.57
SMPD3-211ENST00000568373 UBL5Q9BZL1 73 aa11.5□□□□□ -0.57
SMPD3-211ENST00000568373 FAM236AA0A1B0GUQ0 79 aa11.5□□□□□ -0.57
SMPD3-211ENST00000568373 FAM236BA0A1B0GV22 79 aa11.5□□□□□ -0.57
SMPD3-211ENST00000568373 DEFB105AQ8NG35 78 aa11.5□□□□□ -0.57
SMPD3-211ENST00000568373 LINC01547P58512 204 aaPredicted RBP11.49□□□□□ -0.57
SMPD3-211ENST00000568373 PKIGQ9Y2B9 76 aa11.48□□□□□ -0.57
SMPD3-211ENST00000568373 CHTF8P0CG12 524 aa11.47□□□□□ -0.57
SMPD3-211ENST00000568373 ATP5EP2Q5VTU8 51 aa11.47□□□□□ -0.57
SMPD3-211ENST00000568373 UBE2BP63146 152 aa11.46□□□□□ -0.57
SMPD3-211ENST00000568373 IGLV5-48A0A075B6I7 105 aa11.45□□□□□ -0.58
SMPD3-211ENST00000568373 ERC2-IT1O76042 136 aa11.44□□□□□ -0.58
SMPD3-211ENST00000568373 ST20-AS1Q8NBB2 130 aa11.44□□□□□ -0.58
SMPD3-211ENST00000568373 CCDC179H3BU77 68 aa11.43□□□□□ -0.58
SMPD3-211ENST00000568373 Q6ZVQ6 151 aa11.42□□□□□ -0.58
SMPD3-211ENST00000568373 LINC00474Q9P2X8 69 aa11.42□□□□□ -0.58
SMPD3-211ENST00000568373 HIST1H4AP62805 103 aaKnown RBP11.41□□□□□ -0.58
SMPD3-211ENST00000568373 KMT2AQ03164 3969 aa11.41□□□□□ -0.58
SMPD3-211ENST00000568373 PHF5AQ7RTV0 110 aaKnown RBP11.4□□□□□ -0.58
SMPD3-211ENST00000568373 C3orf22Q8N5N4 141 aa11.4□□□□□ -0.58
SMPD3-211ENST00000568373 Q6ZR54 194 aa11.4□□□□□ -0.58
SMPD3-211ENST00000568373 FAM19A1Q7Z5A9 133 aa11.4□□□□□ -0.58
SMPD3-211ENST00000568373 A0A087WTM6 91 aa11.39□□□□□ -0.59
SMPD3-211ENST00000568373 A0A087WVE0 104 aa11.39□□□□□ -0.59
SMPD3-211ENST00000568373 DNAH2Q9P225 4427 aa11.38□□□□□ -0.59
SMPD3-211ENST00000568373 PRLHP81277 87 aa11.38□□□□□ -0.59
SMPD3-211ENST00000568373 TNP2Q05952 138 aa11.37□□□□□ -0.59
SMPD3-211ENST00000568373 KRTAP11-1Q8IUC1 163 aa11.37□□□□□ -0.59
SMPD3-211ENST00000568373 PANO1I0J062 215 aa11.36□□□□□ -0.59
SMPD3-211ENST00000568373 HAMPP81172 84 aa11.35□□□□□ -0.59
SMPD3-211ENST00000568373 HECTD4Q9Y4D8 3996 aa11.33□□□□□ -0.6
SMPD3-211ENST00000568373 ATOX1O00244 68 aa11.32□□□□□ -0.6
SMPD3-211ENST00000568373 CXCL6P80162 114 aa11.32□□□□□ -0.6
SMPD3-211ENST00000568373 HIGD2AQ9BW72 106 aa11.32□□□□□ -0.6
SMPD3-211ENST00000568373 SPACA4Q8TDM5 124 aa11.32□□□□□ -0.6
SMPD3-211ENST00000568373 DNAH17Q9UFH2 4485 aa11.31□□□□□ -0.6
SMPD3-211ENST00000568373 H0Y9J4 135 aa11.31□□□□□ -0.6
SMPD3-211ENST00000568373 C1orf137Q5JT78 98 aa11.31□□□□□ -0.6
SMPD3-211ENST00000568373 SMIM29Q86T20 159 aa11.31□□□□□ -0.6
SMPD3-211ENST00000568373 DPH3Q96FX2 82 aa11.31□□□□□ -0.6
SMPD3-211ENST00000568373 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.31□□□□□ -0.6
SMPD3-211ENST00000568373 WWC2-AS2Q96NR7 200 aa11.3□□□□□ -0.6
SMPD3-211ENST00000568373 FUSP35637 526 aaKnown RBP eCLIP11.29□□□□□ -0.6
SMPD3-211ENST00000568373 EPM2AB3EWF7 344 aa11.29□□□□□ -0.6
SMPD3-211ENST00000568373 RTL8CO15255 209 aa11.29□□□□□ -0.6
SMPD3-211ENST00000568373 A0A1W2PNM2 257 aa11.28□□□□□ -0.6
SMPD3-211ENST00000568373 C1orf134Q5TEV5 83 aa11.28□□□□□ -0.6
SMPD3-211ENST00000568373 SMIM20Q8N5G0 67 aa11.28□□□□□ -0.6
SMPD3-211ENST00000568373 A0A1B0GW54 56 aa11.28□□□□□ -0.6
SMPD3-211ENST00000568373 C3orf84H3BNL1 204 aa11.28□□□□□ -0.6
SMPD3-211ENST00000568373 LY6G6CO95867 125 aa11.27□□□□□ -0.61
SMPD3-211ENST00000568373 DNAH6Q9C0G6 4158 aa11.27□□□□□ -0.61
SMPD3-211ENST00000568373 Q8NBF4 154 aa11.26□□□□□ -0.61
SMPD3-211ENST00000568373 F8WEM9 126 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms