RNA–Protein interactions for RNA: ENST00000565662.5

USB1-211, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 719 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-211ENST00000565662 LINC00518Q8N0U6 118 aa9.71□□□□□ -0.86
USB1-211ENST00000565662 ZNF815PA8K554 130 aa9.7□□□□□ -0.86
USB1-211ENST00000565662 ZNF73O43830 326 aaPredicted RBP9.7□□□□□ -0.86
USB1-211ENST00000565662 SPINK1P00995 79 aa9.7□□□□□ -0.86
USB1-211ENST00000565662 TPRXLQ17RH7 258 aa9.7□□□□□ -0.86
USB1-211ENST00000565662 FP248Q71RG6 208 aaPredicted RBP9.7□□□□□ -0.86
USB1-211ENST00000565662 RPS29P62273 56 aaKnown RBP9.69□□□□□ -0.86
USB1-211ENST00000565662 C3orf22Q8N5N4 141 aa9.69□□□□□ -0.86
USB1-211ENST00000565662 C3orf79P0CE67 100 aa9.68□□□□□ -0.86
USB1-211ENST00000565662 SSBP3-AS1Q7Z2R9 100 aa9.68□□□□□ -0.86
USB1-211ENST00000565662 SPANXDQ9BXN6 97 aa9.68□□□□□ -0.86
USB1-211ENST00000565662 PPDPFQ9H3Y8 114 aa9.68□□□□□ -0.86
USB1-211ENST00000565662 KRTDAPP60985 99 aa9.67□□□□□ -0.86
USB1-211ENST00000565662 SNRPEP62304 92 aaKnown RBP9.67□□□□□ -0.86
USB1-211ENST00000565662 SLC25A34Q6PIV7 304 aa9.67□□□□□ -0.86
USB1-211ENST00000565662 Q6ZVH6 145 aa9.67□□□□□ -0.86
USB1-211ENST00000565662 LINC00308Q8TCZ7 52 aa9.67□□□□□ -0.86
USB1-211ENST00000565662 ADAMTSL4-AS1Q5T5F5 129 aa9.66□□□□□ -0.86
USB1-211ENST00000565662 GAGE2AQ6NT46 116 aa9.66□□□□□ -0.86
USB1-211ENST00000565662 SCGB1D4Q6XE38 83 aa9.66□□□□□ -0.86
USB1-211ENST00000565662 SOSTDC1Q6X4U4 206 aa9.65□□□□□ -0.86
USB1-211ENST00000565662 LITAFQ99732 161 aa9.65□□□□□ -0.86
USB1-211ENST00000565662 DHRS4-AS1Q9P1J3 65 aa9.65□□□□□ -0.86
USB1-211ENST00000565662 LPAP08519 4548 aa9.64□□□□□ -0.87
USB1-211ENST00000565662 IGLV7-46A0A075B6I9 117 aa9.64□□□□□ -0.87
USB1-211ENST00000565662 IFITM1P13164 125 aa9.64□□□□□ -0.87
USB1-211ENST00000565662 NPC2P61916 151 aa9.64□□□□□ -0.87
USB1-211ENST00000565662 Q8NBF4 154 aa9.64□□□□□ -0.87
USB1-211ENST00000565662 OR13C6PQ8NH95 151 aa9.64□□□□□ -0.87
USB1-211ENST00000565662 Q9BRP9 147 aa9.64□□□□□ -0.87
USB1-211ENST00000565662 RNF213Q63HN8 5207 aa9.64□□□□□ -0.87
USB1-211ENST00000565662 CDIP1Q9H305 208 aa9.63□□□□□ -0.87
USB1-211ENST00000565662 MOBPQ13875 183 aa9.6□□□□□ -0.87
USB1-211ENST00000565662 RETNLBQ9BQ08 111 aa9.6□□□□□ -0.87
USB1-211ENST00000565662 IGLV9-49A0A0B4J1Y8 123 aa9.59□□□□□ -0.87
USB1-211ENST00000565662 TRBV7-6A0A0J9YX20 115 aa9.59□□□□□ -0.87
USB1-211ENST00000565662 S100A1P23297 94 aa9.59□□□□□ -0.87
USB1-211ENST00000565662 ERC2-IT1O76042 136 aa9.57□□□□□ -0.88
USB1-211ENST00000565662 S100A2P29034 98 aa9.57□□□□□ -0.88
USB1-211ENST00000565662 SLC25A20O43772 301 aa9.56□□□□□ -0.88
USB1-211ENST00000565662 EIF4EBP3O60516 100 aaPredicted RBP9.56□□□□□ -0.88
USB1-211ENST00000565662 ELOF1P60002 83 aaKnown RBP9.56□□□□□ -0.88
USB1-211ENST00000565662 C9orf153Q5TBE3 101 aa9.56□□□□□ -0.88
USB1-211ENST00000565662 A4D1N5 150 aa9.55□□□□□ -0.88
USB1-211ENST00000565662 HSBP1L1C9JCN9 74 aa9.55□□□□□ -0.88
USB1-211ENST00000565662 SPRR1BP22528 89 aa9.55□□□□□ -0.88
USB1-211ENST00000565662 COX7BP24311 80 aa9.55□□□□□ -0.88
USB1-211ENST00000565662 A0A1B0GWB2 263 aa9.54□□□□□ -0.88
USB1-211ENST00000565662 NHP2Q9NX24 153 aaKnown RBP9.54□□□□□ -0.88
USB1-211ENST00000565662 LAMTOR3Q9UHA4 124 aa9.54□□□□□ -0.88
USB1-211ENST00000565662 TRAV13-2A0A0B4J235 113 aa9.53□□□□□ -0.88
USB1-211ENST00000565662 LIMD2Q9BT23 127 aa9.53□□□□□ -0.88
USB1-211ENST00000565662 S100A6P06703 90 aa9.52□□□□□ -0.89
USB1-211ENST00000565662 C6orf99Q4VX62 202 aa9.52□□□□□ -0.89
USB1-211ENST00000565662 ANKRD39Q53RE8 183 aa9.52□□□□□ -0.89
USB1-211ENST00000565662 TTTY13Q9BZ97 58 aa9.52□□□□□ -0.89
USB1-211ENST00000565662 A6NDN8 102 aa9.49□□□□□ -0.89
USB1-211ENST00000565662 ATOH7Q8N100 152 aa9.49□□□□□ -0.89
USB1-211ENST00000565662 Q8N377 158 aa9.49□□□□□ -0.89
USB1-211ENST00000565662 HIST3H2BBQ8N257 126 aa9.48□□□□□ -0.89
USB1-211ENST00000565662 TEX49A0A1B0GTD5 131 aa9.47□□□□□ -0.89
USB1-211ENST00000565662 HIST1H2BLQ99880 126 aa9.47□□□□□ -0.89
USB1-211ENST00000565662 CD164Q04900 197 aa9.46□□□□□ -0.9
USB1-211ENST00000565662 TAL2Q16559 108 aa9.46□□□□□ -0.9
USB1-211ENST00000565662 PCP2Q8IVA1 136 aa9.46□□□□□ -0.9
USB1-211ENST00000565662 ST20-AS1Q8NBB2 130 aa9.46□□□□□ -0.9
USB1-211ENST00000565662 VAMP3Q15836 100 aa9.45□□□□□ -0.9
USB1-211ENST00000565662 KRTAP13-3Q3SY46 172 aa9.45□□□□□ -0.9
USB1-211ENST00000565662 MUSTN1Q8IVN3 82 aa9.45□□□□□ -0.9
USB1-211ENST00000565662 PRO1933Q9H354 126 aa9.43□□□□□ -0.9
USB1-211ENST00000565662 SEC61BP60468 96 aaKnown RBP9.41□□□□□ -0.9
USB1-211ENST00000565662 IGLV5-48A0A075B6I7 105 aa9.4□□□□□ -0.9
USB1-211ENST00000565662 ASB16-AS1Q495Z4 193 aa9.38□□□□□ -0.91
USB1-211ENST00000565662 MUC2Q02817 5179 aa9.38□□□□□ -0.91
USB1-211ENST00000565662 H7C2G1 150 aa9.37□□□□□ -0.91
USB1-211ENST00000565662 Q5XG85 94 aa9.37□□□□□ -0.91
USB1-211ENST00000565662 DEFB105AQ8NG35 78 aa9.37□□□□□ -0.91
USB1-211ENST00000565662 SMIM11BQ8TCY0 68 aa9.37□□□□□ -0.91
USB1-211ENST00000565662 F8WEM9 126 aa9.36□□□□□ -0.91
USB1-211ENST00000565662 Q1RN00 199 aa9.36□□□□□ -0.91
USB1-211ENST00000565662 SCGB1D1O95968 90 aa9.35□□□□□ -0.91
USB1-211ENST00000565662 BVES-AS1Q5T3Y7 98 aa9.34□□□□□ -0.91
USB1-211ENST00000565662 DLEU1O43261 78 aa9.33□□□□□ -0.92
USB1-211ENST00000565662 SNCGO76070 127 aa9.33□□□□□ -0.92
USB1-211ENST00000565662 PPDPFLQ8WWR9 84 aa9.33□□□□□ -0.92
USB1-211ENST00000565662 HIST1H4GQ99525 98 aa9.32□□□□□ -0.92
USB1-211ENST00000565662 MUC17Q685J3 4493 aa9.31□□□□□ -0.92
USB1-211ENST00000565662 COX8AP10176 69 aa9.31□□□□□ -0.92
USB1-211ENST00000565662 XP32Q5T750 250 aa9.31□□□□□ -0.92
USB1-211ENST00000565662 hADV29S1A0JD25 119 aa9.3□□□□□ -0.92
USB1-211ENST00000565662 LINC01547P58512 204 aaPredicted RBP9.3□□□□□ -0.92
USB1-211ENST00000565662 LINC00575Q6W349 94 aa9.3□□□□□ -0.92
USB1-211ENST00000565662 SMIM29Q86T20 159 aa9.3□□□□□ -0.92
USB1-211ENST00000565662 TCL1BO95988 128 aa9.29□□□□□ -0.92
USB1-211ENST00000565662 Q6JHZ5 121 aa9.29□□□□□ -0.92
USB1-211ENST00000565662 HRCT1Q6UXD1 115 aa9.29□□□□□ -0.92
USB1-211ENST00000565662 GHRHP01286 108 aa9.27□□□□□ -0.93
USB1-211ENST00000565662 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.27□□□□□ -0.93
USB1-211ENST00000565662 HIGD1BQ9P298 99 aa9.26□□□□□ -0.93
USB1-211ENST00000565662 OCIAD2Q56VL3 154 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms