RNA–Protein interactions for RNA: ENST00000564966.5

PPP4C-208, Transcript of protein phosphatase 4 catalytic subunit, human

TSL 2

Gene PPP4C, Length 1,122 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4C-208	ENST00000564966	SOSTDC1	Q6X4U4	206 aa		14.33	□□□□□ -0.12
PPP4C-208	ENST00000564966	SSBP3-AS1	Q7Z2R9	100 aa		14.33	□□□□□ -0.12
PPP4C-208	ENST00000564966	HINT1	P49773	126 aa	Predicted RBP	14.31	□□□□□ -0.12
PPP4C-208	ENST00000564966	EIF4EBP3	O60516	100 aa	Predicted RBP	14.3	□□□□□ -0.12
PPP4C-208	ENST00000564966	KRTAP13-3	Q3SY46	172 aa		14.3	□□□□□ -0.12
PPP4C-208	ENST00000564966	OR13C6P	Q8NH95	151 aa		14.3	□□□□□ -0.12
PPP4C-208	ENST00000564966	SYS1-DBNDD2	H3BUS1	97 aa		14.29	□□□□□ -0.12
PPP4C-208	ENST00000564966	CBY1	Q9Y3M2	126 aa		14.29	□□□□□ -0.12
PPP4C-208	ENST00000564966	ST20-AS1	Q8NBB2	130 aa		14.26	□□□□□ -0.13
PPP4C-208	ENST00000564966	SLC25A20	O43772	301 aa		14.25	□□□□□ -0.13
PPP4C-208	ENST00000564966	RPS29	P62273	56 aa	Known RBP	14.24	□□□□□ -0.13
PPP4C-208	ENST00000564966		Q8N377	158 aa		14.24	□□□□□ -0.13
PPP4C-208	ENST00000564966	LINC00308	Q8TCZ7	52 aa		14.24	□□□□□ -0.13
PPP4C-208	ENST00000564966	SPANXC	Q9NY87	97 aa		14.24	□□□□□ -0.13
PPP4C-208	ENST00000564966	HIST1H2BK	O60814	126 aa		14.23	□□□□□ -0.13
PPP4C-208	ENST00000564966	HIST1H2BJ	P06899	126 aa		14.23	□□□□□ -0.13
PPP4C-208	ENST00000564966	HIST1H2BO	P23527	126 aa		14.23	□□□□□ -0.13
PPP4C-208	ENST00000564966	HIST1H2BB	P33778	126 aa		14.23	□□□□□ -0.13
PPP4C-208	ENST00000564966	HIST1H2BD	P58876	126 aa		14.23	□□□□□ -0.13
PPP4C-208	ENST00000564966	HIST1H2BC	P62807	126 aa		14.23	□□□□□ -0.13
PPP4C-208	ENST00000564966	HIST2H2BE	Q16778	126 aa		14.23	□□□□□ -0.13
PPP4C-208	ENST00000564966	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	14.23	□□□□□ -0.13
PPP4C-208	ENST00000564966	HIST1H2BH	Q93079	126 aa		14.23	□□□□□ -0.13
PPP4C-208	ENST00000564966	HIST1H2BN	Q99877	126 aa		14.23	□□□□□ -0.13
PPP4C-208	ENST00000564966	HIST1H2BM	Q99879	126 aa		14.23	□□□□□ -0.13
PPP4C-208	ENST00000564966	LCE2A	Q5TA79	106 aa	Predicted RBP	14.22	□□□□□ -0.13
PPP4C-208	ENST00000564966	ZNF815P	A8K554	130 aa		14.21	□□□□□ -0.13
PPP4C-208	ENST00000564966	LINC01545	Q5VT33	79 aa		14.19	□□□□□ -0.14
PPP4C-208	ENST00000564966	PET117	Q6UWS5	81 aa		14.19	□□□□□ -0.14
PPP4C-208	ENST00000564966	LITAF	Q99732	161 aa		14.19	□□□□□ -0.14
PPP4C-208	ENST00000564966	TIMM17B	O60830	172 aa		14.18	□□□□□ -0.14
PPP4C-208	ENST00000564966	SEC61B	P60468	96 aa	Known RBP	14.17	□□□□□ -0.14
PPP4C-208	ENST00000564966	ASB16-AS1	Q495Z4	193 aa		14.17	□□□□□ -0.14
PPP4C-208	ENST00000564966	TTTY13	Q9BZ97	58 aa		14.16	□□□□□ -0.14
PPP4C-208	ENST00000564966	C5orf52	A6NGY3	159 aa		14.15	□□□□□ -0.14
PPP4C-208	ENST00000564966	SPANXD	Q9BXN6	97 aa		14.15	□□□□□ -0.14
PPP4C-208	ENST00000564966	DHRS4-AS1	Q9P1J3	65 aa		14.15	□□□□□ -0.14
PPP4C-208	ENST00000564966	SLC25A34	Q6PIV7	304 aa		14.14	□□□□□ -0.15
PPP4C-208	ENST00000564966	KRTAP9-2	Q9BYQ4	174 aa		14.14	□□□□□ -0.15
PPP4C-208	ENST00000564966	HRCT1	Q6UXD1	115 aa		14.13	□□□□□ -0.15
PPP4C-208	ENST00000564966	KRTDAP	P60985	99 aa		14.12	□□□□□ -0.15
PPP4C-208	ENST00000564966	C3orf79	P0CE67	100 aa		14.11	□□□□□ -0.15
PPP4C-208	ENST00000564966	COX7B	P24311	80 aa		14.11	□□□□□ -0.15
PPP4C-208	ENST00000564966	SCGB1D4	Q6XE38	83 aa		14.11	□□□□□ -0.15
PPP4C-208	ENST00000564966	LINC00518	Q8N0U6	118 aa		14.11	□□□□□ -0.15
PPP4C-208	ENST00000564966	LAMTOR3	Q9UHA4	124 aa		14.11	□□□□□ -0.15
PPP4C-208	ENST00000564966	C6orf99	Q4VX62	202 aa		14.09	□□□□□ -0.15
PPP4C-208	ENST00000564966	DEFB105A	Q8NG35	78 aa		14.08	□□□□□ -0.16
PPP4C-208	ENST00000564966	TAL2	Q16559	108 aa		14.07	□□□□□ -0.16
PPP4C-208	ENST00000564966	LIMD2	Q9BT23	127 aa		14.07	□□□□□ -0.16
PPP4C-208	ENST00000564966	SPRR1B	P22528	89 aa		14.06	□□□□□ -0.16
PPP4C-208	ENST00000564966	ELOF1	P60002	83 aa	Known RBP	14.06	□□□□□ -0.16
PPP4C-208	ENST00000564966	C20orf202	A1L168	122 aa		14.05	□□□□□ -0.16
PPP4C-208	ENST00000564966	LINC01547	P58512	204 aa	Predicted RBP	14.05	□□□□□ -0.16
PPP4C-208	ENST00000564966		Q1RN00	199 aa		14.04	□□□□□ -0.16
PPP4C-208	ENST00000564966	COPS9	Q8WXC6	57 aa		14.03	□□□□□ -0.16
PPP4C-208	ENST00000564966	XP32	Q5T750	250 aa		14.02	□□□□□ -0.17
PPP4C-208	ENST00000564966		A6NDN8	102 aa		14.01	□□□□□ -0.17
PPP4C-208	ENST00000564966	KRTAP4-1	Q9BYQ7	146 aa		14.01	□□□□□ -0.17
PPP4C-208	ENST00000564966	ATOH7	Q8N100	152 aa		14	□□□□□ -0.17
PPP4C-208	ENST00000564966	ANKRD39	Q53RE8	183 aa		13.98	□□□□□ -0.17
PPP4C-208	ENST00000564966	TEX49	A0A1B0GTD5	131 aa		13.97	□□□□□ -0.17
PPP4C-208	ENST00000564966	PRO1933	Q9H354	126 aa		13.96	□□□□□ -0.17
PPP4C-208	ENST00000564966	C9orf92	A6NGG3	77 aa		13.95	□□□□□ -0.18
PPP4C-208	ENST00000564966	IFITM1	P13164	125 aa		13.95	□□□□□ -0.18
PPP4C-208	ENST00000564966	COA6	Q5JTJ3	125 aa	Known RBP	13.95	□□□□□ -0.18
PPP4C-208	ENST00000564966		A0A1B0GWB2	263 aa		13.94	□□□□□ -0.18
PPP4C-208	ENST00000564966		H7C2G1	150 aa		13.94	□□□□□ -0.18
PPP4C-208	ENST00000564966	TRBV7-6	A0A0J9YX20	115 aa		13.93	□□□□□ -0.18
PPP4C-208	ENST00000564966	MUSTN1	Q8IVN3	82 aa		13.93	□□□□□ -0.18
PPP4C-208	ENST00000564966		Q6ZVH6	145 aa		13.91	□□□□□ -0.18
PPP4C-208	ENST00000564966	PCP2	Q8IVA1	136 aa		13.91	□□□□□ -0.18
PPP4C-208	ENST00000564966	AKR1D1	P51857	326 aa		13.89	□□□□□ -0.19
PPP4C-208	ENST00000564966	CD164	Q04900	197 aa		13.89	□□□□□ -0.19
PPP4C-208	ENST00000564966	TRAV13-2	A0A0B4J235	113 aa		13.85	□□□□□ -0.19
PPP4C-208	ENST00000564966	PCOTH	Q58A44	107 aa		13.85	□□□□□ -0.19
PPP4C-208	ENST00000564966	NHP2	Q9NX24	153 aa	Known RBP	13.85	□□□□□ -0.19
PPP4C-208	ENST00000564966		A4D1N5	150 aa		13.84	□□□□□ -0.19
PPP4C-208	ENST00000564966	SMIM29	Q86T20	159 aa		13.84	□□□□□ -0.19
PPP4C-208	ENST00000564966		A0A0G2JQZ4	141 aa		13.82	□□□□□ -0.2
PPP4C-208	ENST00000564966	IGLV8-61	A0A075B6I0	122 aa		13.81	□□□□□ -0.2
PPP4C-208	ENST00000564966	IGLV5-48	A0A075B6I7	105 aa		13.81	□□□□□ -0.2
PPP4C-208	ENST00000564966	SMIM11B	Q8TCY0	68 aa		13.81	□□□□□ -0.2
PPP4C-208	ENST00000564966	SNRPE	P62304	92 aa	Known RBP	13.78	□□□□□ -0.2
PPP4C-208	ENST00000564966	VAMP3	Q15836	100 aa		13.78	□□□□□ -0.2
PPP4C-208	ENST00000564966		F8WEM9	126 aa		13.77	□□□□□ -0.21
PPP4C-208	ENST00000564966	HSBP1L1	C9JCN9	74 aa		13.76	□□□□□ -0.21
PPP4C-208	ENST00000564966	S100A2	P29034	98 aa		13.75	□□□□□ -0.21
PPP4C-208	ENST00000564966	C1orf195	Q5TG92	126 aa		13.75	□□□□□ -0.21
PPP4C-208	ENST00000564966	KRTAP9-6	A0A140TA67	174 aa		13.74	□□□□□ -0.21
PPP4C-208	ENST00000564966		Q5XG85	94 aa		13.74	□□□□□ -0.21
PPP4C-208	ENST00000564966	TCL1B	O95988	128 aa		13.71	□□□□□ -0.21
PPP4C-208	ENST00000564966	HIST3H2BB	Q8N257	126 aa		13.68	□□□□□ -0.22
PPP4C-208	ENST00000564966	HIST1H2BL	Q99880	126 aa		13.67	□□□□□ -0.22
PPP4C-208	ENST00000564966	LINC00575	Q6W349	94 aa		13.66	□□□□□ -0.22
PPP4C-208	ENST00000564966	hADV29S1	A0JD25	119 aa		13.65	□□□□□ -0.22
PPP4C-208	ENST00000564966	LCE2C	Q5TA81	110 aa		13.65	□□□□□ -0.22
PPP4C-208	ENST00000564966		Q6ZQY7	126 aa		13.65	□□□□□ -0.22
PPP4C-208	ENST00000564966	S100A6	P06703	90 aa		13.61	□□□□□ -0.23
PPP4C-208	ENST00000564966	C12orf57	Q99622	126 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 84.3 ms