RNA–Protein interactions for RNA: ENST00000562046.1

CNOT1-203, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 5

Gene CNOT1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-203ENST00000562046 CPSF4LA6NMK7 179 aaKnown RBP1.14□□□□□ -2.23
CNOT1-203ENST00000562046 M0R1W7 72 aa1.14□□□□□ -2.23
CNOT1-203ENST00000562046 ABRACLQ9P1F3 81 aa1.14□□□□□ -2.23
CNOT1-203ENST00000562046 C4AP0C0L4 1744 aa1.14□□□□□ -2.23
CNOT1-203ENST00000562046 SMIM27A0A1W2PRY6 76 aa1.13□□□□□ -2.23
CNOT1-203ENST00000562046 I3L3M4 83 aa1.13□□□□□ -2.23
CNOT1-203ENST00000562046 KIF21BO75037 1637 aa1.13□□□□□ -2.23
CNOT1-203ENST00000562046 ATP7AQ04656 1500 aa1.13□□□□□ -2.23
CNOT1-203ENST00000562046 COX6B1P14854 86 aa1.12□□□□□ -2.23
CNOT1-203ENST00000562046 PLNP26678 52 aa1.12□□□□□ -2.23
CNOT1-203ENST00000562046 SERF2P84101 59 aa1.12□□□□□ -2.23
CNOT1-203ENST00000562046 TNRC6CQ9HCJ0 1690 aaKnown RBP1.12□□□□□ -2.23
CNOT1-203ENST00000562046 C4BP0C0L5 1744 aa1.12□□□□□ -2.23
CNOT1-203ENST00000562046 KNTC1P50748 2209 aa1.11□□□□□ -2.23
CNOT1-203ENST00000562046 ETDCA0A1B0GVM5 59 aa1.11□□□□□ -2.23
CNOT1-203ENST00000562046 RPL38P63173 70 aaKnown RBP1.11□□□□□ -2.23
CNOT1-203ENST00000562046 AHCTF1Q8WYP5 2266 aa1.1□□□□□ -2.23
CNOT1-203ENST00000562046 ANKRD17O75179 2603 aaKnown RBP1.1□□□□□ -2.23
CNOT1-203ENST00000562046 SPTY2D1-AS1A0A0U1RR47 76 aa1.1□□□□□ -2.23
CNOT1-203ENST00000562046 LINC01546A6NGU7 62 aa1.1□□□□□ -2.23
CNOT1-203ENST00000562046 UBE2DNLQ8IWF7 75 aa1.1□□□□□ -2.23
CNOT1-203ENST00000562046 MROH2BQ7Z745 1585 aa1.09□□□□□ -2.23
CNOT1-203ENST00000562046 DEFB131BA0A096LNP1 70 aa1.09□□□□□ -2.23
CNOT1-203ENST00000562046 K7EIL1 84 aa1.09□□□□□ -2.23
CNOT1-203ENST00000562046 ZDBF2Q9HCK1 2354 aa1.09□□□□□ -2.23
CNOT1-203ENST00000562046 CRIPTQ9P021 101 aa1.08□□□□□ -2.24
CNOT1-203ENST00000562046 SAMD9LQ8IVG5 1584 aa1.08□□□□□ -2.24
CNOT1-203ENST00000562046 BPTFQ12830 3046 aa1.07□□□□□ -2.24
CNOT1-203ENST00000562046 I3L2K1 104 aa1.07□□□□□ -2.24
CNOT1-203ENST00000562046 CRIP1P50238 77 aa1.07□□□□□ -2.24
CNOT1-203ENST00000562046 GOLGA4Q13439 2230 aaKnown RBP1.07□□□□□ -2.24
CNOT1-203ENST00000562046 LMO7Q8WWI1 1683 aa1.07□□□□□ -2.24
CNOT1-203ENST00000562046 SPINK4O60575 86 aa1.06□□□□□ -2.24
CNOT1-203ENST00000562046 MRPL33O75394 65 aaKnown RBP1.06□□□□□ -2.24
CNOT1-203ENST00000562046 CNTRLQ7Z7A1 2325 aa1.06□□□□□ -2.24
CNOT1-203ENST00000562046 DUOX1Q9NRD9 1551 aa1.05□□□□□ -2.24
CNOT1-203ENST00000562046 NAV3Q8IVL0 2385 aa1.05□□□□□ -2.24
CNOT1-203ENST00000562046 H0YGX0 51 aa1.05□□□□□ -2.24
CNOT1-203ENST00000562046 K7EQZ3 153 aa1.05□□□□□ -2.24
CNOT1-203ENST00000562046 DEFB123Q8N688 67 aa1.05□□□□□ -2.24
CNOT1-203ENST00000562046 TP53AIP1Q9HCN2 124 aa1.05□□□□□ -2.24
CNOT1-203ENST00000562046 TIMM8BQ9Y5J9 83 aaPredicted RBP1.05□□□□□ -2.24
CNOT1-203ENST00000562046 CNOT1A5YKK6 2376 aaKnown RBP1.05□□□□□ -2.24
CNOT1-203ENST00000562046 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.04□□□□□ -2.249e-7■■■□□ 17.1
CNOT1-203ENST00000562046 MRPL34Q9BQ48 92 aaKnown RBP1.04□□□□□ -2.24
CNOT1-203ENST00000562046 PRO3102Q9H379 93 aa1.04□□□□□ -2.24
CNOT1-203ENST00000562046 CDKN2A-AS1Q9UH64 79 aa1.04□□□□□ -2.24
CNOT1-203ENST00000562046 CACNA1EQ15878 2313 aa1.04□□□□□ -2.24
CNOT1-203ENST00000562046 NDUFA3O95167 84 aa1.03□□□□□ -2.24
CNOT1-203ENST00000562046 DOPEY2Q9Y3R5 2298 aa1.03□□□□□ -2.25
CNOT1-203ENST00000562046 FAM208BQ5VWN6 2430 aa1.03□□□□□ -2.25
CNOT1-203ENST00000562046 LOC730098B7Z3J9 87 aa1.02□□□□□ -2.25
CNOT1-203ENST00000562046 LINC00158P58513 81 aa1.02□□□□□ -2.25
CNOT1-203ENST00000562046 FXYD6P3P58550 94 aa1.02□□□□□ -2.25
CNOT1-203ENST00000562046 SNRPGP62308 76 aaKnown RBP1.02□□□□□ -2.25
CNOT1-203ENST00000562046 PIGYQ3MUY2 71 aa1.02□□□□□ -2.25
CNOT1-203ENST00000562046 Q8IZM0 81 aa1.02□□□□□ -2.25
CNOT1-203ENST00000562046 USMG5Q96IX5 58 aa1.02□□□□□ -2.25
CNOT1-203ENST00000562046 C10orf95Q9H7T3 257 aa1.02□□□□□ -2.25
CNOT1-203ENST00000562046 GCC2Q8IWJ2 1684 aa1.01□□□□□ -2.25
CNOT1-203ENST00000562046 COX6A2Q02221 97 aa1.01□□□□□ -2.25
CNOT1-203ENST00000562046 CNFNQ9BYD5 112 aa1.01□□□□□ -2.25
CNOT1-203ENST00000562046 LYNX1G3V0Z9 82 aa1□□□□□ -2.25
CNOT1-203ENST00000562046 H0YAA0 97 aa1□□□□□ -2.25
CNOT1-203ENST00000562046 COX6B2Q6YFQ2 88 aa1□□□□□ -2.25
CNOT1-203ENST00000562046 JMJD1CQ15652 2540 aa1□□□□□ -2.25
CNOT1-203ENST00000562046 CCL22O00626 93 aa0.99□□□□□ -2.25
CNOT1-203ENST00000562046 PRB3Q04118 309 aaPredicted RBP0.99□□□□□ -2.25
CNOT1-203ENST00000562046 LELP1Q5T871 98 aa0.99□□□□□ -2.25
CNOT1-203ENST00000562046 LINC00308Q8TCZ7 52 aa0.99□□□□□ -2.25
CNOT1-203ENST00000562046 TMEM167BQ9NRX6 74 aa0.99□□□□□ -2.25
CNOT1-203ENST00000562046 PLCE1Q9P212 2302 aa0.99□□□□□ -2.25
CNOT1-203ENST00000562046 PRO0255Q9UI72 69 aa0.97□□□□□ -2.25
CNOT1-203ENST00000562046 ALMS1Q8TCU4 4167 aa0.97□□□□□ -2.25
CNOT1-203ENST00000562046 PTPRZ1P23471 2315 aaPredicted RBP0.97□□□□□ -2.25
CNOT1-203ENST00000562046 SPRR1AP35321 89 aa0.96□□□□□ -2.26
CNOT1-203ENST00000562046 TFF3Q07654 80 aa0.96□□□□□ -2.26
CNOT1-203ENST00000562046 SPINK9Q5DT21 86 aa0.96□□□□□ -2.26
CNOT1-203ENST00000562046 CLTCL1P53675 1640 aa0.96□□□□□ -2.26
CNOT1-203ENST00000562046 USF3Q68DE3 2245 aa0.95□□□□□ -2.26
CNOT1-203ENST00000562046 MINOS1Q5TGZ0 78 aa0.95□□□□□ -2.26
CNOT1-203ENST00000562046 PTPRQQ9UMZ3 2332 aa0.95□□□□□ -2.26
CNOT1-203ENST00000562046 FBN2P35556 2912 aa0.95□□□□□ -2.26
CNOT1-203ENST00000562046 H1FX-AS1Q4G0G2 97 aa0.94□□□□□ -2.26
CNOT1-203ENST00000562046 Q5VSD8 79 aa0.94□□□□□ -2.26
CNOT1-203ENST00000562046 SMIM2Q9BVW6 85 aa0.94□□□□□ -2.26
CNOT1-203ENST00000562046 C6orf48Q9UBA6 75 aa0.94□□□□□ -2.26
CNOT1-203ENST00000562046 PIEZO2Q9H5I5 2752 aa0.93□□□□□ -2.26
CNOT1-203ENST00000562046 A0A0D9SG42 100 aa0.93□□□□□ -2.26
CNOT1-203ENST00000562046 APLNQ9ULZ1 77 aa0.93□□□□□ -2.26
CNOT1-203ENST00000562046 NOTCH1P46531 2555 aa0.92□□□□□ -2.26
CNOT1-203ENST00000562046 NDUFA1O15239 70 aa0.92□□□□□ -2.26
CNOT1-203ENST00000562046 IAPPP10997 89 aa0.92□□□□□ -2.26
CNOT1-203ENST00000562046 DEFB105AQ8NG35 78 aa0.92□□□□□ -2.26
CNOT1-203ENST00000562046 SPRR1BP22528 89 aa0.91□□□□□ -2.26
CNOT1-203ENST00000562046 RPS27P42677 84 aaKnown RBP0.91□□□□□ -2.26
CNOT1-203ENST00000562046 RPS27LQ71UM5 84 aaKnown RBP0.91□□□□□ -2.26
CNOT1-203ENST00000562046 WFDC13Q8IUB5 93 aa0.91□□□□□ -2.26
CNOT1-203ENST00000562046 C2CD3Q4AC94 2353 aa0.91□□□□□ -2.26
CNOT1-203ENST00000562046 DEFB130BP0DP73 79 aa0.9□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 332.9 ms