RNA–Protein interactions for RNA: ENST00000561702.5

SPG7-203, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 2,042 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-203ENST00000561702 C3orf22Q8N5N4 141 aa9.41□□□□□ -0.9
SPG7-203ENST00000561702 UBE2DNLQ8IWF7 75 aa9.4□□□□□ -0.9
SPG7-203ENST00000561702 CSMD3Q7Z407 3707 aa9.39□□□□□ -0.91
SPG7-203ENST00000561702 TLX1NBP0CAT3 122 aa9.39□□□□□ -0.91
SPG7-203ENST00000561702 Q6ZRP5 223 aa9.39□□□□□ -0.91
SPG7-203ENST00000561702 RMI2Q96E14 147 aa9.39□□□□□ -0.91
SPG7-203ENST00000561702 DNAH1Q9P2D7 4330 aa9.38□□□□□ -0.91
SPG7-203ENST00000561702 COX7CP15954 63 aa9.38□□□□□ -0.91
SPG7-203ENST00000561702 PLA2G2DQ9UNK4 145 aa9.38□□□□□ -0.91
SPG7-203ENST00000561702 LINC00528Q8N1L1 170 aa9.37□□□□□ -0.91
SPG7-203ENST00000561702 KRTAP1-5Q9BYS1 174 aa9.37□□□□□ -0.91
SPG7-203ENST00000561702 SS18L2Q9UHA2 77 aa9.36□□□□□ -0.91
SPG7-203ENST00000561702 PLECQ15149 4684 aaKnown RBP9.36□□□□□ -0.91
SPG7-203ENST00000561702 NKAPP1Q8N9T2 125 aa9.36□□□□□ -0.91
SPG7-203ENST00000561702 STARD9Q9P2P6 4700 aa9.35□□□□□ -0.91
SPG7-203ENST00000561702 C9orf153Q5TBE3 101 aa9.35□□□□□ -0.91
SPG7-203ENST00000561702 KCNQ1DNQ9H478 68 aa9.35□□□□□ -0.91
SPG7-203ENST00000561702 TRBV7-4A0A0J9YYF1 115 aa9.34□□□□□ -0.91
SPG7-203ENST00000561702 CASC10Q5T4H9 136 aa9.34□□□□□ -0.91
SPG7-203ENST00000561702 LYSTQ99698 3801 aa9.33□□□□□ -0.92
SPG7-203ENST00000561702 FBN3Q75N90 2809 aa9.33□□□□□ -0.92
SPG7-203ENST00000561702 USP17L23D6RBM5 183 aa9.32□□□□□ -0.92
SPG7-203ENST00000561702 SERP2Q8N6R1 65 aa9.32□□□□□ -0.92
SPG7-203ENST00000561702 IGLV5-37A0A075B6J1 123 aa9.31□□□□□ -0.92
SPG7-203ENST00000561702 CRYGAP11844 174 aa9.31□□□□□ -0.92
SPG7-203ENST00000561702 A0A087WVE0 104 aa9.31□□□□□ -0.92
SPG7-203ENST00000561702 BCE1O60756 84 aa9.29□□□□□ -0.92
SPG7-203ENST00000561702 CXCL6P80162 114 aa9.29□□□□□ -0.92
SPG7-203ENST00000561702 Q6ZVQ6 151 aa9.29□□□□□ -0.92
SPG7-203ENST00000561702 C7orf33Q8WU49 177 aa9.29□□□□□ -0.92
SPG7-203ENST00000561702 PRYO14603 147 aa9.28□□□□□ -0.92
SPG7-203ENST00000561702 DHRS4-AS1Q9P1J3 65 aa9.28□□□□□ -0.92
SPG7-203ENST00000561702 NBDYA0A0U1RRE5 68 aa9.27□□□□□ -0.92
SPG7-203ENST00000561702 VPS13DQ5THJ4 4388 aa9.27□□□□□ -0.92
SPG7-203ENST00000561702 LINC01547P58512 204 aaPredicted RBP9.27□□□□□ -0.93
SPG7-203ENST00000561702 SERTAD4-AS1Q5TG53 156 aa9.27□□□□□ -0.93
SPG7-203ENST00000561702 WWC2-AS2Q96NR7 200 aa9.26□□□□□ -0.93
SPG7-203ENST00000561702 LOC107984640A0A0U1RRK4 108 aa9.25□□□□□ -0.93
SPG7-203ENST00000561702 FAM19A1Q7Z5A9 133 aa9.25□□□□□ -0.93
SPG7-203ENST00000561702 M0R2N4 97 aa9.24□□□□□ -0.93
SPG7-203ENST00000561702 HAMPP81172 84 aa9.24□□□□□ -0.93
SPG7-203ENST00000561702 IGLV1-50A0A075B6I6 118 aa9.24□□□□□ -0.93
SPG7-203ENST00000561702 SPRR1AP35321 89 aa9.24□□□□□ -0.93
SPG7-203ENST00000561702 Q6ZRX8 168 aa9.24□□□□□ -0.93
SPG7-203ENST00000561702 TENM2Q9NT68 2774 aa9.23□□□□□ -0.93
SPG7-203ENST00000561702 A0A1B0GW54 56 aa9.23□□□□□ -0.93
SPG7-203ENST00000561702 SMIM20Q8N5G0 67 aa9.23□□□□□ -0.93
SPG7-203ENST00000561702 ETDCA0A1B0GVM5 59 aa9.22□□□□□ -0.93
SPG7-203ENST00000561702 KRTAP4-16G5E9R7 235 aaPredicted RBP9.21□□□□□ -0.93
SPG7-203ENST00000561702 PSCAO43653 123 aa9.21□□□□□ -0.93
SPG7-203ENST00000561702 DNAH10Q8IVF4 4471 aa9.2□□□□□ -0.94
SPG7-203ENST00000561702 IGLV5-48A0A075B6I7 105 aa9.2□□□□□ -0.94
SPG7-203ENST00000561702 MRPL55Q7Z7F7 128 aaKnown RBP9.2□□□□□ -0.94
SPG7-203ENST00000561702 Q6ZRN7 208 aaPredicted RBP9.19□□□□□ -0.94
SPG7-203ENST00000561702 Q8N377 158 aa9.19□□□□□ -0.94
SPG7-203ENST00000561702 TGP01266 2768 aa9.18□□□□□ -0.94
SPG7-203ENST00000561702 FAM168BA1KXE4 195 aa9.17□□□□□ -0.94
SPG7-203ENST00000561702 RPL37AP8A6NKH3 93 aa9.17□□□□□ -0.94
SPG7-203ENST00000561702 Q6ZR54 194 aa9.17□□□□□ -0.94
SPG7-203ENST00000561702 TRAV7A0A075B6U4 112 aa9.16□□□□□ -0.94
SPG7-203ENST00000561702 TMEM258P61165 79 aa9.16□□□□□ -0.94
SPG7-203ENST00000561702 LRCOL1A6NCL2 159 aa9.15□□□□□ -0.94
SPG7-203ENST00000561702 CNBPP62633 177 aaKnown RBP9.15□□□□□ -0.94
SPG7-203ENST00000561702 DEFB105AQ8NG35 78 aa9.15□□□□□ -0.94
SPG7-203ENST00000561702 LY6G6CO95867 125 aa9.15□□□□□ -0.94
SPG7-203ENST00000561702 Q9BRP9 147 aa9.15□□□□□ -0.94
SPG7-203ENST00000561702 C3orf84H3BNL1 204 aa9.14□□□□□ -0.95
SPG7-203ENST00000561702 FUSP35637 526 aaKnown RBP eCLIP9.14□□□□□ -0.95
SPG7-203ENST00000561702 NREPQ16612 68 aa9.14□□□□□ -0.95
SPG7-203ENST00000561702 C14orf177Q52M58 125 aa9.14□□□□□ -0.95
SPG7-203ENST00000561702 KRTAP7-1Q8IUC3 87 aa9.14□□□□□ -0.95
SPG7-203ENST00000561702 LINC00476Q8WZB0 136 aa9.14□□□□□ -0.95
SPG7-203ENST00000561702 DNAH6Q9C0G6 4158 aa9.14□□□□□ -0.95
SPG7-203ENST00000561702 FAM19A5Q7Z5A7 132 aaPredicted RBP9.14□□□□□ -0.95
SPG7-203ENST00000561702 C16orf90A8MZG2 172 aa9.13□□□□□ -0.95
SPG7-203ENST00000561702 REG3GQ6UW15 175 aa9.13□□□□□ -0.95
SPG7-203ENST00000561702 KMT2AQ03164 3969 aa9.12□□□□□ -0.95
SPG7-203ENST00000561702 ALMS1Q8TCU4 4167 aa9.12□□□□□ -0.95
SPG7-203ENST00000561702 PKIGQ9Y2B9 76 aa9.12□□□□□ -0.95
SPG7-203ENST00000561702 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.11□□□□□ -0.95
SPG7-203ENST00000561702 TNP2Q05952 138 aa9.11□□□□□ -0.95
SPG7-203ENST00000561702 RPS28P62857 69 aaKnown RBP9.1□□□□□ -0.95
SPG7-203ENST00000561702 UBE2BP63146 152 aa9.1□□□□□ -0.95
SPG7-203ENST00000561702 C1orf137Q5JT78 98 aa9.09□□□□□ -0.95
SPG7-203ENST00000561702 J3KT08 172 aa9.08□□□□□ -0.96
SPG7-203ENST00000561702 BPY2O14599 106 aa9.08□□□□□ -0.96
SPG7-203ENST00000561702 SCXQ7RTU7 201 aa9.07□□□□□ -0.96
SPG7-203ENST00000561702 Q8NBF4 154 aa9.07□□□□□ -0.96
SPG7-203ENST00000561702 CYSTM1Q9H1C7 97 aa9.07□□□□□ -0.96
SPG7-203ENST00000561702 A0A087WTM6 91 aa9.06□□□□□ -0.96
SPG7-203ENST00000561702 A0A096LNI7 61 aa9.06□□□□□ -0.96
SPG7-203ENST00000561702 C1orf134Q5TEV5 83 aa9.06□□□□□ -0.96
SPG7-203ENST00000561702 C20orf197Q8N268 126 aa9.06□□□□□ -0.96
SPG7-203ENST00000561702 SPRR4Q96PI1 79 aa9.06□□□□□ -0.96
SPG7-203ENST00000561702 ST20-AS1Q8NBB2 130 aa9.05□□□□□ -0.96
SPG7-203ENST00000561702 KLKP1Q107X0 134 aa9.05□□□□□ -0.96
SPG7-203ENST00000561702 A0A1W2PNM2 257 aa9.04□□□□□ -0.96
SPG7-203ENST00000561702 F8WEM9 126 aa9.04□□□□□ -0.96
SPG7-203ENST00000561702 IGKV4-1P06312 121 aa9.04□□□□□ -0.96
SPG7-203ENST00000561702 ERC2-IT1O76042 136 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms