RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 TMEM167BQ9NRX6 74 aa3□□□□□ -1.93
HERC1-213ENST00000561359 NHP2Q9NX24 153 aaKnown RBP3□□□□□ -1.93
HERC1-213ENST00000561359 ANAPC11Q9NYG5 84 aa3□□□□□ -1.93
HERC1-213ENST00000561359 MACF1Q9UPN3 7388 aaKnown RBP3□□□□□ -1.93
HERC1-213ENST00000561359 SYNE2Q8WXH0 6885 aaKnown RBP3□□□□□ -1.93
HERC1-213ENST00000561359 TINCRA0A1B0GVN0 87 aa2.99□□□□□ -1.93
HERC1-213ENST00000561359 NCR2O95944 276 aa2.99□□□□□ -1.93
HERC1-213ENST00000561359 HERVK_113P63121 156 aa2.99□□□□□ -1.93
HERC1-213ENST00000561359 FP248Q71RG6 208 aaPredicted RBP2.99□□□□□ -1.93
HERC1-213ENST00000561359 RNASE7Q9H1E1 156 aaKnown RBP2.99□□□□□ -1.93
HERC1-213ENST00000561359 FAM240AA0A1B0GVK7 77 aa2.98□□□□□ -1.93
HERC1-213ENST00000561359 C19orf71A6NCJ1 209 aa2.98□□□□□ -1.93
HERC1-213ENST00000561359 K7ERJ3 54 aa2.98□□□□□ -1.93
HERC1-213ENST00000561359 NPYP01303 97 aa2.98□□□□□ -1.93
HERC1-213ENST00000561359 SCGB1C2P0DMR2 95 aa2.98□□□□□ -1.93
HERC1-213ENST00000561359 TMEM258P61165 79 aa2.98□□□□□ -1.93
HERC1-213ENST00000561359 SS18Q15532 418 aa2.98□□□□□ -1.93
HERC1-213ENST00000561359 KRTAP13-2Q52LG2 175 aa2.98□□□□□ -1.93
HERC1-213ENST00000561359 C9orf153Q5TBE3 101 aa2.98□□□□□ -1.93
HERC1-213ENST00000561359 PCP2Q8IVA1 136 aa2.98□□□□□ -1.93
HERC1-213ENST00000561359 MYMXA0A1B0GTQ4 84 aa2.97□□□□□ -1.93
HERC1-213ENST00000561359 HIGD1CA8MV81 97 aa2.97□□□□□ -1.93
HERC1-213ENST00000561359 SH2D1AO60880 128 aa2.97□□□□□ -1.93
HERC1-213ENST00000561359 MGPP08493 103 aa2.97□□□□□ -1.93
HERC1-213ENST00000561359 SPANXN1Q5VSR9 72 aa2.97□□□□□ -1.93
HERC1-213ENST00000561359 ANKRD29Q8N6D5 301 aa2.97□□□□□ -1.93
HERC1-213ENST00000561359 EPDR1Q9UM22 224 aa2.97□□□□□ -1.93
HERC1-213ENST00000561359 V9GYY9 64 aa2.97□□□□□ -1.93
HERC1-213ENST00000561359 A0A096LNJ9 63 aa2.96□□□□□ -1.94
HERC1-213ENST00000561359 IGKV2D-26A0A0A0MRZ7 120 aa2.96□□□□□ -1.94
HERC1-213ENST00000561359 LINC00959A0A1B0GUT2 108 aa2.96□□□□□ -1.94
HERC1-213ENST00000561359 KRTAP4-16G5E9R7 235 aaPredicted RBP2.96□□□□□ -1.94
HERC1-213ENST00000561359 M0QY20 66 aa2.96□□□□□ -1.94
HERC1-213ENST00000561359 ATP5LO75964 103 aa2.96□□□□□ -1.94
HERC1-213ENST00000561359 HBDP02042 147 aa2.96□□□□□ -1.94
HERC1-213ENST00000561359 COX7CP15954 63 aa2.96□□□□□ -1.94
HERC1-213ENST00000561359 RPL28P46779 137 aaKnown RBP2.96□□□□□ -1.94
HERC1-213ENST00000561359 PSMB2P49721 201 aa2.96□□□□□ -1.94
HERC1-213ENST00000561359 CRIP1P50238 77 aa2.96□□□□□ -1.94
HERC1-213ENST00000561359 FOXA3P55318 350 aaPredicted RBP2.96□□□□□ -1.94
HERC1-213ENST00000561359 C6orf226Q5I0X4 101 aa2.96□□□□□ -1.94
HERC1-213ENST00000561359 Q5XG85 94 aa2.96□□□□□ -1.94
HERC1-213ENST00000561359 GAGE2AQ6NT46 116 aa2.96□□□□□ -1.94
HERC1-213ENST00000561359 CD164L2Q6UWJ8 174 aa2.96□□□□□ -1.94
HERC1-213ENST00000561359 IFI27L1Q96BM0 104 aa2.96□□□□□ -1.94
HERC1-213ENST00000561359 PGLYRP4Q96LB8 373 aa2.96□□□□□ -1.94
HERC1-213ENST00000561359 UBE2D4Q9Y2X8 147 aa2.96□□□□□ -1.94
HERC1-213ENST00000561359 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.95□□□□□ -1.94
HERC1-213ENST00000561359 IGKV2-29A2NJV5 120 aaPredicted RBP2.95□□□□□ -1.94
HERC1-213ENST00000561359 LINC01546A6NGU7 62 aa2.95□□□□□ -1.94
HERC1-213ENST00000561359 COX7A2LO14548 114 aa2.95□□□□□ -1.94
HERC1-213ENST00000561359 LTAP01374 205 aa2.95□□□□□ -1.94
HERC1-213ENST00000561359 ACYP1P07311 99 aa2.95□□□□□ -1.94
HERC1-213ENST00000561359 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.95□□□□□ -1.94
HERC1-213ENST00000561359 COX6B2Q6YFQ2 88 aa2.95□□□□□ -1.94
HERC1-213ENST00000561359 AMN1Q8IY45 258 aa2.95□□□□□ -1.94
HERC1-213ENST00000561359 PLEKHB2Q96CS7 222 aa2.95□□□□□ -1.94
HERC1-213ENST00000561359 C2orf48Q96LS8 159 aa2.95□□□□□ -1.94
HERC1-213ENST00000561359 HIST1H4GQ99525 98 aa2.95□□□□□ -1.94
HERC1-213ENST00000561359 IGLV8-61A0A075B6I0 122 aa2.94□□□□□ -1.94
HERC1-213ENST00000561359 NDUFC2-KCTD14E9PQ53 114 aa2.94□□□□□ -1.94
HERC1-213ENST00000561359 SLC25A20O43772 301 aa2.94□□□□□ -1.94
HERC1-213ENST00000561359 DPM2O94777 84 aa2.94□□□□□ -1.94
HERC1-213ENST00000561359 TCL1BO95988 128 aa2.94□□□□□ -1.94
HERC1-213ENST00000561359 IGKCP01834 107 aa2.94□□□□□ -1.94
HERC1-213ENST00000561359 TRACP01848 142 aa2.94□□□□□ -1.94
HERC1-213ENST00000561359 CXCL5P42830 114 aa2.94□□□□□ -1.94
HERC1-213ENST00000561359 RIGQ13278 110 aa2.94□□□□□ -1.94
HERC1-213ENST00000561359 C4orf26Q17RF5 130 aa2.94□□□□□ -1.94
HERC1-213ENST00000561359 FAM229BQ4G0N7 80 aa2.94□□□□□ -1.94
HERC1-213ENST00000561359 TMEM170BQ5T4T1 132 aa2.94□□□□□ -1.94
HERC1-213ENST00000561359 HRCT1Q6UXD1 115 aa2.94□□□□□ -1.94
HERC1-213ENST00000561359 Q86TA4 180 aa2.94□□□□□ -1.94
HERC1-213ENST00000561359 KRTAP7-1Q8IUC3 87 aa2.94□□□□□ -1.94
HERC1-213ENST00000561359 FLGP20930 4061 aaPredicted RBP2.94□□□□□ -1.94
HERC1-213ENST00000561359 FAM236AA0A1B0GUQ0 79 aa2.93□□□□□ -1.94
HERC1-213ENST00000561359 FAM236BA0A1B0GV22 79 aa2.93□□□□□ -1.94
HERC1-213ENST00000561359 LINC01549A6NIU2 74 aa2.93□□□□□ -1.94
HERC1-213ENST00000561359 PEX7O00628 323 aa2.93□□□□□ -1.94
HERC1-213ENST00000561359 CFC1P0CG37 223 aa2.93□□□□□ -1.94
HERC1-213ENST00000561359 HIST1H4AP62805 103 aaKnown RBP2.93□□□□□ -1.94
HERC1-213ENST00000561359 SPAG11BQ08648 103 aa2.93□□□□□ -1.94
HERC1-213ENST00000561359 KRTAP6-3Q3LI67 103 aa2.93□□□□□ -1.94
HERC1-213ENST00000561359 LINC00242Q5T6M2 205 aa2.93□□□□□ -1.94
HERC1-213ENST00000561359 DAND5Q8N907 189 aa2.93□□□□□ -1.94
HERC1-213ENST00000561359 PYGO1Q9Y3Y4 419 aa2.93□□□□□ -1.94
HERC1-213ENST00000561359 LOC107984156A0A0G2JMH3 177 aa2.92□□□□□ -1.94
HERC1-213ENST00000561359 A0A1B0GUT8 65 aa2.92□□□□□ -1.94
HERC1-213ENST00000561359 H3BT86 120 aa2.92□□□□□ -1.94
HERC1-213ENST00000561359 H7C423 109 aa2.92□□□□□ -1.94
HERC1-213ENST00000561359 J3QQQ9 107 aa2.92□□□□□ -1.94
HERC1-213ENST00000561359 ATOX1O00244 68 aa2.92□□□□□ -1.94
HERC1-213ENST00000561359 NDUFA1O15239 70 aa2.92□□□□□ -1.94
HERC1-213ENST00000561359 BCE1O60756 84 aa2.92□□□□□ -1.94
HERC1-213ENST00000561359 PCOTHQ58A44 107 aa2.92□□□□□ -1.94
HERC1-213ENST00000561359 C1orf195Q5TG92 126 aa2.92□□□□□ -1.94
HERC1-213ENST00000561359 SPAG11AQ6PDA7 123 aa2.92□□□□□ -1.94
HERC1-213ENST00000561359 C5orf38Q86SI9 138 aa2.92□□□□□ -1.94
HERC1-213ENST00000561359 LINC00643Q86TS7 51 aa2.92□□□□□ -1.94
HERC1-213ENST00000561359 ARL17AQ8IVW1 177 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms