RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 FAM19A5Q7Z5A7 132 aaPredicted RBP8.23□□□□□ -1.09
SNX1-211ENST00000560829 LINC00528Q8N1L1 170 aa8.23□□□□□ -1.09
SNX1-211ENST00000560829 LY6G6CO95867 125 aa8.22□□□□□ -1.09
SNX1-211ENST00000560829 SPRR1AP35321 89 aa8.22□□□□□ -1.09
SNX1-211ENST00000560829 VPS25Q9BRG1 176 aa8.22□□□□□ -1.09
SNX1-211ENST00000560829 DNAH17Q9UFH2 4485 aa8.22□□□□□ -1.09
SNX1-211ENST00000560829 TMEM256-PLSCR3K7ERE1 68 aa8.21□□□□□ -1.09
SNX1-211ENST00000560829 SDIM1Q6ZPB5 146 aa8.21□□□□□ -1.09
SNX1-211ENST00000560829 OBSCN-AS1Q96MR7 158 aa8.21□□□□□ -1.09
SNX1-211ENST00000560829 IGKV2-24A0A0C4DH68 120 aa8.21□□□□□ -1.1
SNX1-211ENST00000560829 C1orf134Q5TEV5 83 aa8.21□□□□□ -1.1
SNX1-211ENST00000560829 KRTAP4-16G5E9R7 235 aaPredicted RBP8.2□□□□□ -1.1
SNX1-211ENST00000560829 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.2□□□□□ -1.1
SNX1-211ENST00000560829 A0A1W2PNN7 141 aa8.19□□□□□ -1.1
SNX1-211ENST00000560829 RPL37AP8A6NKH3 93 aa8.19□□□□□ -1.1
SNX1-211ENST00000560829 H3BQ85 93 aa8.19□□□□□ -1.1
SNX1-211ENST00000560829 INAFM2P0DMQ5 153 aa8.19□□□□□ -1.1
SNX1-211ENST00000560829 LINC00474Q9P2X8 69 aa8.19□□□□□ -1.1
SNX1-211ENST00000560829 Q6ZQY7 126 aa8.19□□□□□ -1.1
SNX1-211ENST00000560829 FAM240AA0A1B0GVK7 77 aa8.17□□□□□ -1.1
SNX1-211ENST00000560829 TGP01266 2768 aa8.17□□□□□ -1.1
SNX1-211ENST00000560829 HECTD4Q9Y4D8 3996 aa8.17□□□□□ -1.1
SNX1-211ENST00000560829 GHRHP01286 108 aa8.17□□□□□ -1.1
SNX1-211ENST00000560829 CHTF8P0CG12 524 aa8.17□□□□□ -1.1
SNX1-211ENST00000560829 B5MCH6 92 aa8.16□□□□□ -1.1
SNX1-211ENST00000560829 JMJD7-PLA2G4BH0Y9G9 81 aa8.16□□□□□ -1.1
SNX1-211ENST00000560829 Q6ZRX8 168 aa8.16□□□□□ -1.1
SNX1-211ENST00000560829 CDIP1Q9H305 208 aa8.16□□□□□ -1.1
SNX1-211ENST00000560829 ETDCA0A1B0GVM5 59 aa8.15□□□□□ -1.11
SNX1-211ENST00000560829 EPM2AB3EWF7 344 aa8.15□□□□□ -1.11
SNX1-211ENST00000560829 DHRS4-AS1Q9P1J3 65 aa8.15□□□□□ -1.11
SNX1-211ENST00000560829 RTL8CO15255 209 aa8.14□□□□□ -1.11
SNX1-211ENST00000560829 REG3GQ6UW15 175 aa8.14□□□□□ -1.11
SNX1-211ENST00000560829 ACYP1P07311 99 aa8.13□□□□□ -1.11
SNX1-211ENST00000560829 SPACA4Q8TDM5 124 aa8.13□□□□□ -1.11
SNX1-211ENST00000560829 HYDINQ4G0P3 5121 aa8.12□□□□□ -1.11
SNX1-211ENST00000560829 DNAH11Q96DT5 4516 aa8.12□□□□□ -1.11
SNX1-211ENST00000560829 PANO1I0J062 215 aa8.12□□□□□ -1.11
SNX1-211ENST00000560829 Q9BRP9 147 aa8.12□□□□□ -1.11
SNX1-211ENST00000560829 C14orf132Q9NPU4 83 aa8.12□□□□□ -1.11
SNX1-211ENST00000560829 FRAS1Q86XX4 4008 aa8.12□□□□□ -1.11
SNX1-211ENST00000560829 PHF5AQ7RTV0 110 aaKnown RBP8.11□□□□□ -1.11
SNX1-211ENST00000560829 TNP2Q05952 138 aa8.1□□□□□ -1.11
SNX1-211ENST00000560829 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.1□□□□□ -1.11
SNX1-211ENST00000560829 SACSQ9NZJ4 4579 aa8.09□□□□□ -1.11
SNX1-211ENST00000560829 IGLV5-52A0A0A0MRZ9 124 aa8.09□□□□□ -1.12
SNX1-211ENST00000560829 SIGMAR1Q99720 223 aa8.09□□□□□ -1.12
SNX1-211ENST00000560829 LAMTOR3Q9UHA4 124 aa8.09□□□□□ -1.12
SNX1-211ENST00000560829 DNAH5Q8TE73 4624 aa8.09□□□□□ -1.12
SNX1-211ENST00000560829 UBE2BP63146 152 aa8.08□□□□□ -1.12
SNX1-211ENST00000560829 RBM3P98179 157 aaKnown RBP8.08□□□□□ -1.12
SNX1-211ENST00000560829 KRTAP11-1Q8IUC1 163 aa8.08□□□□□ -1.12
SNX1-211ENST00000560829 FAT2Q9NYQ8 4349 aa8.08□□□□□ -1.12
SNX1-211ENST00000560829 LINC01547P58512 204 aaPredicted RBP8.07□□□□□ -1.12
SNX1-211ENST00000560829 GAGE2AQ6NT46 116 aa8.07□□□□□ -1.12
SNX1-211ENST00000560829 LOC110117498A0A087WWA1 95 aa8.06□□□□□ -1.12
SNX1-211ENST00000560829 CCKP06307 115 aa8.06□□□□□ -1.12
SNX1-211ENST00000560829 FUSP35637 526 aaKnown RBP eCLIP8.06□□□□□ -1.12
SNX1-211ENST00000560829 XGP55808 180 aa8.06□□□□□ -1.12
SNX1-211ENST00000560829 SMCR5Q8TEV8 140 aa8.06□□□□□ -1.12
SNX1-211ENST00000560829 IGLV5-48A0A075B6I7 105 aa8.06□□□□□ -1.12
SNX1-211ENST00000560829 H0Y9J4 135 aa8.06□□□□□ -1.12
SNX1-211ENST00000560829 NDUFV3P56181 108 aaKnown RBP8.06□□□□□ -1.12
SNX1-211ENST00000560829 Q8N377 158 aa8.06□□□□□ -1.12
SNX1-211ENST00000560829 A0A1B0GV72 72 aa8.05□□□□□ -1.12
SNX1-211ENST00000560829 FAM19A1Q7Z5A9 133 aa8.05□□□□□ -1.12
SNX1-211ENST00000560829 DPH3Q96FX2 82 aa8.05□□□□□ -1.12
SNX1-211ENST00000560829 DNAH8Q96JB1 4490 aa8.05□□□□□ -1.12
SNX1-211ENST00000560829 ERC2-IT1O76042 136 aa8.04□□□□□ -1.12
SNX1-211ENST00000560829 PDE6GP18545 87 aa8.04□□□□□ -1.12
SNX1-211ENST00000560829 PLAC8Q9NZF1 115 aa8.04□□□□□ -1.12
SNX1-211ENST00000560829 Q6ZQT0 140 aa8.04□□□□□ -1.12
SNX1-211ENST00000560829 TRBV7-4A0A0J9YYF1 115 aa8.03□□□□□ -1.12
SNX1-211ENST00000560829 MT-ATP8P03928 68 aa8.03□□□□□ -1.12
SNX1-211ENST00000560829 PRLHP81277 87 aa8.02□□□□□ -1.12
SNX1-211ENST00000560829 DSCR8Q96T75 97 aa8.02□□□□□ -1.12
SNX1-211ENST00000560829 ST20-AS1Q8NBB2 130 aa8.02□□□□□ -1.13
SNX1-211ENST00000560829 BCE1O60756 84 aa8.01□□□□□ -1.13
SNX1-211ENST00000560829 C21orf62-AS1Q17RA5 79 aa8.01□□□□□ -1.13
SNX1-211ENST00000560829 DEFB105AQ8NG35 78 aa8.01□□□□□ -1.13
SNX1-211ENST00000560829 KRTAP10-2P60368 255 aa8□□□□□ -1.13
SNX1-211ENST00000560829 KRTAP13-1Q8IUC0 172 aa8□□□□□ -1.13
SNX1-211ENST00000560829 LINC00846Q9NV44 126 aa8□□□□□ -1.13
SNX1-211ENST00000560829 PKD1P98161 4303 aa7.99□□□□□ -1.13
SNX1-211ENST00000560829 LINC00643Q86TS7 51 aa7.99□□□□□ -1.13
SNX1-211ENST00000560829 HIGD2AQ9BW72 106 aa7.98□□□□□ -1.13
SNX1-211ENST00000560829 LCE6AA0A183 80 aa7.98□□□□□ -1.13
SNX1-211ENST00000560829 SCGB1A1P11684 91 aa7.97□□□□□ -1.13
SNX1-211ENST00000560829 UBE2AP49459 152 aa7.97□□□□□ -1.13
SNX1-211ENST00000560829 SMIM29Q86T20 159 aa7.96□□□□□ -1.13
SNX1-211ENST00000560829 SPRR1BP22528 89 aa7.95□□□□□ -1.14
SNX1-211ENST00000560829 C3orf22Q8N5N4 141 aa7.95□□□□□ -1.14
SNX1-211ENST00000560829 Q6Q795 121 aa7.94□□□□□ -1.14
SNX1-211ENST00000560829 Q6ZSA8 131 aa7.94□□□□□ -1.14
SNX1-211ENST00000560829 TRBV7-7A0A0K0K1E9 115 aa7.94□□□□□ -1.14
SNX1-211ENST00000560829 PSORS1C2Q9UIG4 136 aa7.94□□□□□ -1.14
SNX1-211ENST00000560829 RYR2Q92736 4967 aa7.93□□□□□ -1.14
SNX1-211ENST00000560829 FAM30AQ9NZY2 134 aa7.92□□□□□ -1.14
SNX1-211ENST00000560829 Q6JHZ5 121 aa7.92□□□□□ -1.14
SNX1-211ENST00000560829 IMUPQ9GZP8 106 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms