RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 NCR2O95944 276 aa1.5□□□□□ -2.17
LRRC28-218ENST00000560236 IGLC6P0CF74 106 aa1.5□□□□□ -2.17
LRRC28-218ENST00000560236 SMIM17P0DL12 118 aa1.5□□□□□ -2.17
LRRC28-218ENST00000560236 CSN1S1P47710 185 aa1.5□□□□□ -2.17
LRRC28-218ENST00000560236 CRIP1P50238 77 aa1.5□□□□□ -2.17
LRRC28-218ENST00000560236 GNG5P63218 68 aa1.5□□□□□ -2.17
LRRC28-218ENST00000560236 HSD52Q0P140 79 aa1.5□□□□□ -2.17
LRRC28-218ENST00000560236 FAM229BQ4G0N7 80 aa1.5□□□□□ -2.17
LRRC28-218ENST00000560236 RNASEKQ6P5S7 137 aaKnown RBP1.5□□□□□ -2.17
LRRC28-218ENST00000560236 CLPSL2Q6UWE3 100 aa1.5□□□□□ -2.17
LRRC28-218ENST00000560236 PHF5AQ7RTV0 110 aaKnown RBP1.5□□□□□ -2.17
LRRC28-218ENST00000560236 CAMK2N1Q7Z7J9 78 aa1.5□□□□□ -2.17
LRRC28-218ENST00000560236 PCP2Q8IVA1 136 aa1.5□□□□□ -2.17
LRRC28-218ENST00000560236 ATOH7Q8N100 152 aa1.5□□□□□ -2.17
LRRC28-218ENST00000560236 OR10AG1Q8NH19 301 aa1.5□□□□□ -2.17
LRRC28-218ENST00000560236 LINC00526Q96FQ7 95 aa1.5□□□□□ -2.17
LRRC28-218ENST00000560236 TMEM191AQ9H0A3 160 aa1.5□□□□□ -2.17
LRRC28-218ENST00000560236 TP73-AS1Q9UF72 201 aa1.5□□□□□ -2.17
LRRC28-218ENST00000560236 HSPB8Q9UJY1 196 aa1.5□□□□□ -2.17
LRRC28-218ENST00000560236 CHTOPQ9Y3Y2 248 aaKnown RBP1.5□□□□□ -2.17
LRRC28-218ENST00000560236 IGHV1-58A0A0C4DH39 117 aa1.49□□□□□ -2.17
LRRC28-218ENST00000560236 SERTM2A0A1B0GWG4 89 aa1.49□□□□□ -2.17
LRRC28-218ENST00000560236 TMEM238C9JI98 176 aa1.49□□□□□ -2.17
LRRC28-218ENST00000560236 K7ERU9 68 aa1.49□□□□□ -2.17
LRRC28-218ENST00000560236 ARMS2P0C7Q2 107 aa1.49□□□□□ -2.17
LRRC28-218ENST00000560236 SCGB1A1P11684 91 aa1.49□□□□□ -2.17
LRRC28-218ENST00000560236 NTF3P20783 257 aa1.49□□□□□ -2.17
LRRC28-218ENST00000560236 SYCNQ0VAF6 134 aa1.49□□□□□ -2.17
LRRC28-218ENST00000560236 BATFQ16520 125 aa1.49□□□□□ -2.17
LRRC28-218ENST00000560236 KRTAP13-2Q52LG2 175 aa1.49□□□□□ -2.17
LRRC28-218ENST00000560236 FAM104BQ5XKR9 115 aa1.49□□□□□ -2.17
LRRC28-218ENST00000560236 AMMECR1LQ6DCA0 310 aa1.49□□□□□ -2.17
LRRC28-218ENST00000560236 SMIM15Q7Z3B0 74 aa1.49□□□□□ -2.17
LRRC28-218ENST00000560236 OR5A1Q8NGJ0 315 aa1.49□□□□□ -2.17
LRRC28-218ENST00000560236 MAP1LC3CQ9BXW4 147 aa1.49□□□□□ -2.17
LRRC28-218ENST00000560236 KRTAP2-1Q9BYU5 128 aa1.49□□□□□ -2.17
LRRC28-218ENST00000560236 NDUFA12Q9UI09 145 aa1.49□□□□□ -2.17
LRRC28-218ENST00000560236 PHLDA3Q9Y5J5 127 aa1.49□□□□□ -2.17
LRRC28-218ENST00000560236 IGKV2-40A0A087WW87 121 aaPredicted RBP1.48□□□□□ -2.17
LRRC28-218ENST00000560236 IGKV2D-26A0A0A0MRZ7 120 aa1.48□□□□□ -2.17
LRRC28-218ENST00000560236 A0A1W2PPM0 123 aa1.48□□□□□ -2.17
LRRC28-218ENST00000560236 A6NDN8 102 aa1.48□□□□□ -2.17
LRRC28-218ENST00000560236 HSBP1L1C9JCN9 74 aa1.48□□□□□ -2.17
LRRC28-218ENST00000560236 IGKV2D-40P01614 121 aaPredicted RBP1.48□□□□□ -2.17
LRRC28-218ENST00000560236 HBDP02042 147 aa1.48□□□□□ -2.17
LRRC28-218ENST00000560236 IFI27P40305 119 aaPredicted RBP1.48□□□□□ -2.17
LRRC28-218ENST00000560236 RPL28P46779 137 aaKnown RBP1.48□□□□□ -2.17
LRRC28-218ENST00000560236 UBE2BP63146 152 aa1.48□□□□□ -2.17
LRRC28-218ENST00000560236 VAMP3Q15836 100 aa1.48□□□□□ -2.17
LRRC28-218ENST00000560236 TAL2Q16559 108 aa1.48□□□□□ -2.17
LRRC28-218ENST00000560236 MRPL51Q4U2R6 128 aaKnown RBP1.48□□□□□ -2.17
LRRC28-218ENST00000560236 C5orf47Q569G3 176 aa1.48□□□□□ -2.17
LRRC28-218ENST00000560236 GOLT1AQ6ZVE7 132 aa1.48□□□□□ -2.17
LRRC28-218ENST00000560236 ORMDL3Q8N138 153 aa1.48□□□□□ -2.17
LRRC28-218ENST00000560236 EXOC3-AS1Q8N2X6 119 aa1.48□□□□□ -2.17
LRRC28-218ENST00000560236 PRELID3AQ96N28 172 aa1.48□□□□□ -2.17
LRRC28-218ENST00000560236 PSG8Q9UQ74 426 aa1.48□□□□□ -2.17
LRRC28-218ENST00000560236 UBE2D4Q9Y2X8 147 aa1.48□□□□□ -2.17
LRRC28-218ENST00000560236 TRAV12-1A0A0B4J245 112 aa1.47□□□□□ -2.17
LRRC28-218ENST00000560236 A0A1B0GVX0 72 aa1.47□□□□□ -2.17
LRRC28-218ENST00000560236 D6R8Y8 96 aa1.47□□□□□ -2.17
LRRC28-218ENST00000560236 M0QXV9 152 aa1.47□□□□□ -2.17
LRRC28-218ENST00000560236 SH2D1AO60880 128 aa1.47□□□□□ -2.17
LRRC28-218ENST00000560236 ATP5LO75964 103 aa1.47□□□□□ -2.17
LRRC28-218ENST00000560236 APOMO95445 188 aa1.47□□□□□ -2.17
LRRC28-218ENST00000560236 NPYP01303 97 aa1.47□□□□□ -2.17
LRRC28-218ENST00000560236 RNASE3P12724 160 aaKnown RBP1.47□□□□□ -2.17
LRRC28-218ENST00000560236 FCER1GP30273 86 aa1.47□□□□□ -2.17
LRRC28-218ENST00000560236 ZNF80P51504 273 aaPredicted RBP1.47□□□□□ -2.17
LRRC28-218ENST00000560236 FXYD2P54710 66 aa1.47□□□□□ -2.17
LRRC28-218ENST00000560236 LYZL1Q6UWQ5 148 aa1.47□□□□□ -2.17
LRRC28-218ENST00000560236 GTF2H5Q6ZYL4 71 aa1.47□□□□□ -2.17
LRRC28-218ENST00000560236 FA2HQ7L5A8 372 aa1.47□□□□□ -2.17
LRRC28-218ENST00000560236 Q8N8P6 123 aa1.47□□□□□ -2.17
LRRC28-218ENST00000560236 IFI27L1Q96BM0 104 aa1.47□□□□□ -2.17
LRRC28-218ENST00000560236 NXT2Q9NPJ8 142 aaKnown RBP1.47□□□□□ -2.17
LRRC28-218ENST00000560236 SPANXB1Q9NS25 103 aaPredicted RBP1.47□□□□□ -2.17
LRRC28-218ENST00000560236 F8W1H4 67 aa1.46□□□□□ -2.18
LRRC28-218ENST00000560236 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.46□□□□□ -2.18
LRRC28-218ENST00000560236 H3BUT2 72 aa1.46□□□□□ -2.18
LRRC28-218ENST00000560236 K7EMI3 77 aa1.46□□□□□ -2.18
LRRC28-218ENST00000560236 K7EQM0 130 aa1.46□□□□□ -2.18
LRRC28-218ENST00000560236 M0R381 172 aa1.46□□□□□ -2.18
LRRC28-218ENST00000560236 UBE2L6O14933 153 aa1.46□□□□□ -2.18
LRRC28-218ENST00000560236 DPM2O94777 84 aa1.46□□□□□ -2.18
LRRC28-218ENST00000560236 SPINK1P00995 79 aa1.46□□□□□ -2.18
LRRC28-218ENST00000560236 SMIM13P0DJ93 91 aa1.46□□□□□ -2.18
LRRC28-218ENST00000560236 FABP2P12104 132 aa1.46□□□□□ -2.18
LRRC28-218ENST00000560236 S100A4P26447 101 aaKnown RBP1.46□□□□□ -2.18
LRRC28-218ENST00000560236 PCOTHQ58A44 107 aa1.46□□□□□ -2.18
LRRC28-218ENST00000560236 FAM74A4Q5TZK3 123 aa1.46□□□□□ -2.18
LRRC28-218ENST00000560236 NTM-AS1Q6ZSK4 140 aa1.46□□□□□ -2.18
LRRC28-218ENST00000560236 PRNTQ86SH4 94 aa1.46□□□□□ -2.18
LRRC28-218ENST00000560236 AMN1Q8IY45 258 aa1.46□□□□□ -2.18
LRRC28-218ENST00000560236 AMELXQ99217 191 aa1.46□□□□□ -2.18
LRRC28-218ENST00000560236 VPS25Q9BRG1 176 aa1.46□□□□□ -2.18
LRRC28-218ENST00000560236 MAP1LC3AQ9H492 121 aa1.46□□□□□ -2.18
LRRC28-218ENST00000560236 SPCS1Q9Y6A9 102 aa1.46□□□□□ -2.18
LRRC28-218ENST00000560236 KMT2DO14686 5537 aa1.46□□□□□ -2.18
LRRC28-218ENST00000560236 FABP5P3A8MUU1 101 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms