RNA–Protein interactions for RNA: ENST00000559321.1

LINC02253-201, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 2 BASIC

Gene LINC02253, Length 448 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-201ENST00000559321 SPINK4O60575 86 aa0.73□□□□□ -2.29
LINC02253-201ENST00000559321 NDUFA3O95167 84 aa0.73□□□□□ -2.29
LINC02253-201ENST00000559321 CRIP1P50238 77 aa0.73□□□□□ -2.29
LINC02253-201ENST00000559321 PRO3102Q9H379 93 aa0.73□□□□□ -2.29
LINC02253-201ENST00000559321 URB1O60287 2271 aaKnown RBP0.72□□□□□ -2.29
LINC02253-201ENST00000559321 H1FX-AS1Q4G0G2 97 aa0.72□□□□□ -2.29
LINC02253-201ENST00000559321 APLNQ9ULZ1 77 aa0.72□□□□□ -2.29
LINC02253-201ENST00000559321 SYCP2Q9BX26 1530 aa0.72□□□□□ -2.29
LINC02253-201ENST00000559321 FANCD2Q9BXW9 1451 aa0.72□□□□□ -2.29
LINC02253-201ENST00000559321 PIEZO2Q9H5I5 2752 aa0.72□□□□□ -2.29
LINC02253-201ENST00000559321 KIF1AQ12756 1690 aa0.72□□□□□ -2.29
LINC02253-201ENST00000559321 TNRC6CQ9HCJ0 1690 aaKnown RBP0.72□□□□□ -2.29
LINC02253-201ENST00000559321 ADCY10Q96PN6 1610 aa0.71□□□□□ -2.3
LINC02253-201ENST00000559321 CLASP1Q7Z460 1538 aa0.71□□□□□ -2.3
LINC02253-201ENST00000559321 IGIPA6NJ69 53 aa0.71□□□□□ -2.3
LINC02253-201ENST00000559321 FCER1GP30273 86 aa0.71□□□□□ -2.3
LINC02253-201ENST00000559321 KRTAP21-2Q3LI59 83 aa0.71□□□□□ -2.3
LINC02253-201ENST00000559321 NCBP2-AS2Q69YL0 99 aa0.71□□□□□ -2.3
LINC02253-201ENST00000559321 LY75O60449 1722 aa0.71□□□□□ -2.3
LINC02253-201ENST00000559321 MROH2AA6NES4 1674 aa0.7□□□□□ -2.3
LINC02253-201ENST00000559321 C3P01024 1663 aa0.7□□□□□ -2.3
LINC02253-201ENST00000559321 DEPDC5O75140 1603 aa0.7□□□□□ -2.3
LINC02253-201ENST00000559321 DDX60LQ5H9U9 1706 aaKnown RBP0.69□□□□□ -2.3
LINC02253-201ENST00000559321 CACNA1EQ15878 2313 aa0.69□□□□□ -2.3
LINC02253-201ENST00000559321 AHNAKQ09666 5890 aaKnown RBP0.69□□□□□ -2.3
LINC02253-201ENST00000559321 LINC00158P58513 81 aa0.69□□□□□ -2.3
LINC02253-201ENST00000559321 SPINK6Q6UWN8 80 aa0.69□□□□□ -2.3
LINC02253-201ENST00000559321 WFDC13Q8IUB5 93 aa0.69□□□□□ -2.3
LINC02253-201ENST00000559321 TJP1Q07157 1748 aa0.69□□□□□ -2.3
LINC02253-201ENST00000559321 H0YAA0 97 aa0.68□□□□□ -2.3
LINC02253-201ENST00000559321 M0R1W7 72 aa0.68□□□□□ -2.3
LINC02253-201ENST00000559321 LELP1Q5T871 98 aa0.68□□□□□ -2.3
LINC02253-201ENST00000559321 KRTAP19-3Q7Z4W3 81 aa0.68□□□□□ -2.3
LINC02253-201ENST00000559321 TNCP24821 2201 aa0.68□□□□□ -2.3
LINC02253-201ENST00000559321 UGGT1Q9NYU2 1555 aa0.67□□□□□ -2.3
LINC02253-201ENST00000559321 ZNF462Q96JM2 2506 aa0.67□□□□□ -2.3
LINC02253-201ENST00000559321 FXYD6Q9H0Q3 95 aa0.67□□□□□ -2.3
LINC02253-201ENST00000559321 CMC2Q9NRP2 79 aa0.67□□□□□ -2.3
LINC02253-201ENST00000559321 ITSN2Q9NZM3 1697 aa0.67□□□□□ -2.3
LINC02253-201ENST00000559321 DEFB109BQ30KR1 87 aa0.66□□□□□ -2.3
LINC02253-201ENST00000559321 SMR3AQ99954 134 aa0.66□□□□□ -2.3
LINC02253-201ENST00000559321 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.66□□□□□ -2.3
LINC02253-201ENST00000559321 CROCC2H7BZ55 1655 aa0.65□□□□□ -2.3
LINC02253-201ENST00000559321 EFCAB6Q5THR3 1501 aa0.65□□□□□ -2.31
LINC02253-201ENST00000559321 H0YGX0 51 aa0.65□□□□□ -2.31
LINC02253-201ENST00000559321 PLNP26678 52 aa0.65□□□□□ -2.31
LINC02253-201ENST00000559321 PTPRZ1P23471 2315 aaPredicted RBP0.65□□□□□ -2.31
LINC02253-201ENST00000559321 CACNA1HO95180 2353 aa0.64□□□□□ -2.31
LINC02253-201ENST00000559321 KLK9Q2XQG4 91 aa0.64□□□□□ -2.31
LINC02253-201ENST00000559321 CRCT1Q9UGL9 99 aa0.64□□□□□ -2.31
LINC02253-201ENST00000559321 C2CD3Q4AC94 2353 aa0.64□□□□□ -2.31
LINC02253-201ENST00000559321 TTC28Q96AY4 2481 aa0.64□□□□□ -2.31
LINC02253-201ENST00000559321 PTPRQQ9UMZ3 2332 aa0.64□□□□□ -2.31
LINC02253-201ENST00000559321 KIAA0586Q9BVV6 1533 aa0.64□□□□□ -2.31
LINC02253-201ENST00000559321 USF3Q68DE3 2245 aa0.63□□□□□ -2.31
LINC02253-201ENST00000559321 KRTAP4-1Q9BYQ7 146 aa0.63□□□□□ -2.31
LINC02253-201ENST00000559321 CELSR2Q9HCU4 2923 aa0.63□□□□□ -2.31
LINC02253-201ENST00000559321 AGLP35573 1532 aa0.63□□□□□ -2.31
LINC02253-201ENST00000559321 SPTBN2O15020 2390 aa0.62□□□□□ -2.31
LINC02253-201ENST00000559321 PRH1P02810 166 aa0.62□□□□□ -2.31
LINC02253-201ENST00000559321 KRTAP2-3P0C7H8 128 aa0.62□□□□□ -2.31
LINC02253-201ENST00000559321 KRTAP2-4Q9BYR9 128 aa0.62□□□□□ -2.31
LINC02253-201ENST00000559321 KRTAP2-1Q9BYU5 128 aa0.62□□□□□ -2.31
LINC02253-201ENST00000559321 TMEM167BQ9NRX6 74 aa0.62□□□□□ -2.31
LINC02253-201ENST00000559321 CSMD3Q7Z407 3707 aa0.62□□□□□ -2.31
LINC02253-201ENST00000559321 CHD9Q3L8U1 2897 aa0.62□□□□□ -2.31
LINC02253-201ENST00000559321 ABCC8Q09428 1581 aa0.62□□□□□ -2.31
LINC02253-201ENST00000559321 CNOT1A5YKK6 2376 aaKnown RBP0.61□□□□□ -2.31
LINC02253-201ENST00000559321 LINC01546A6NGU7 62 aa0.61□□□□□ -2.31
LINC02253-201ENST00000559321 SPINK1P00995 79 aa0.61□□□□□ -2.31
LINC02253-201ENST00000559321 DEFB130BP0DP73 79 aa0.61□□□□□ -2.31
LINC02253-201ENST00000559321 DEFB130AP0DP74 79 aa0.61□□□□□ -2.31
LINC02253-201ENST00000559321 IAPPP10997 89 aa0.61□□□□□ -2.31
LINC02253-201ENST00000559321 MINOS1Q5TGZ0 78 aa0.61□□□□□ -2.31
LINC02253-201ENST00000559321 POLQO75417 2590 aa0.61□□□□□ -2.31
LINC02253-201ENST00000559321 C4AP0C0L4 1744 aa0.61□□□□□ -2.31
LINC02253-201ENST00000559321 C4BP0C0L5 1744 aa0.61□□□□□ -2.31
LINC02253-201ENST00000559321 DOPEY2Q9Y3R5 2298 aa0.61□□□□□ -2.31
LINC02253-201ENST00000559321 PLCE1Q9P212 2302 aa0.6□□□□□ -2.31
LINC02253-201ENST00000559321 ZNF292O60281 2723 aa0.59□□□□□ -2.31
LINC02253-201ENST00000559321 ABCA12Q86UK0 2595 aa0.59□□□□□ -2.31
LINC02253-201ENST00000559321 ANK2Q01484 3957 aa0.59□□□□□ -2.31
LINC02253-201ENST00000559321 TENM4Q6N022 2769 aa0.59□□□□□ -2.31
LINC02253-201ENST00000559321 BDP1A6H8Y1 2624 aa0.59□□□□□ -2.31
LINC02253-201ENST00000559321 SMIM27A0A1W2PRY6 76 aa0.59□□□□□ -2.31
LINC02253-201ENST00000559321 C6orf48Q9UBA6 75 aa0.59□□□□□ -2.31
LINC02253-201ENST00000559321 LOC730098B7Z3J9 87 aa0.58□□□□□ -2.32
LINC02253-201ENST00000559321 U3KQA8 63 aa0.58□□□□□ -2.32
LINC02253-201ENST00000559321 BPTFQ12830 3046 aa0.57□□□□□ -2.32
LINC02253-201ENST00000559321 ABCA5Q8WWZ7 1642 aa0.57□□□□□ -2.32
LINC02253-201ENST00000559321 AHNAK2Q8IVF2 5795 aa0.57□□□□□ -2.32
LINC02253-201ENST00000559321 LINC00308Q8TCZ7 52 aa0.57□□□□□ -2.32
LINC02253-201ENST00000559321 ZNF469Q96JG9 3925 aaPredicted RBP0.57□□□□□ -2.32
LINC02253-201ENST00000559321 NRXN3Q9Y4C0 1643 aa0.56□□□□□ -2.32
LINC02253-201ENST00000559321 RPS27P42677 84 aaKnown RBP0.56□□□□□ -2.32
LINC02253-201ENST00000559321 WT1-ASQ06250 92 aa0.56□□□□□ -2.32
LINC02253-201ENST00000559321 RPS27LQ71UM5 84 aaKnown RBP0.56□□□□□ -2.32
LINC02253-201ENST00000559321 ABRACLQ9P1F3 81 aa0.56□□□□□ -2.32
LINC02253-201ENST00000559321 FRAS1Q86XX4 4008 aa0.56□□□□□ -2.32
LINC02253-201ENST00000559321 APCP25054 2843 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms