RNA–Protein interactions for RNA: ENST00000557749.5

LINC00648-204, long intergenic non-protein coding RNA 648, humanhuman

TSL 5 BASIC

Gene LINC00648, Length 443 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-204ENST00000557749 HIST1H2BKO60814 126 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 HIST1H2BJP06899 126 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 HIST1H2BOP23527 126 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 HIST1H2BBP33778 126 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 SPRR1AP35321 89 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 HIST1H2BDP58876 126 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 HIST1H2BCP62807 126 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 LRP2P98164 4655 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 PRR4Q16378 134 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 HIST2H2BEQ16778 126 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.72□□□□□ -1.33
LINC00648-204ENST00000557749 PET117Q6UWS5 81 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 LINC00304Q8N9R0 145 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 HIST1H2BHQ93079 126 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 HIST1H2BNQ99877 126 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 HIST1H2BMQ99879 126 aa6.72□□□□□ -1.33
LINC00648-204ENST00000557749 DDTP30046 118 aa6.71□□□□□ -1.34
LINC00648-204ENST00000557749 TSPEAR-AS2P59090 65 aa6.71□□□□□ -1.34
LINC00648-204ENST00000557749 S100A7L2Q5SY68 101 aa6.71□□□□□ -1.34
LINC00648-204ENST00000557749 SPAG11AQ6PDA7 123 aa6.71□□□□□ -1.34
LINC00648-204ENST00000557749 Q8NDZ9 215 aa6.71□□□□□ -1.34
LINC00648-204ENST00000557749 PMCHL2Q9BQD1 86 aa6.71□□□□□ -1.34
LINC00648-204ENST00000557749 TRBV10-3A0A0K0K1G6 114 aa6.7□□□□□ -1.34
LINC00648-204ENST00000557749 C20orf202A1L168 122 aa6.7□□□□□ -1.34
LINC00648-204ENST00000557749 JOSD1Q15040 202 aaPredicted RBP6.7□□□□□ -1.34
LINC00648-204ENST00000557749 HINT1P49773 126 aaPredicted RBP6.69□□□□□ -1.34
LINC00648-204ENST00000557749 LINC01545Q5VT33 79 aa6.69□□□□□ -1.34
LINC00648-204ENST00000557749 COPS9Q8WXC6 57 aa6.69□□□□□ -1.34
LINC00648-204ENST00000557749 SPRR4Q96PI1 79 aa6.69□□□□□ -1.34
LINC00648-204ENST00000557749 A0A0J9YXY3 114 aa6.68□□□□□ -1.34
LINC00648-204ENST00000557749 TIMM17BO60830 172 aa6.68□□□□□ -1.34
LINC00648-204ENST00000557749 TSPAN13O95857 204 aa6.68□□□□□ -1.34
LINC00648-204ENST00000557749 COA6Q5JTJ3 125 aaKnown RBP6.68□□□□□ -1.34
LINC00648-204ENST00000557749 DAND5Q8N907 189 aa6.68□□□□□ -1.34
LINC00648-204ENST00000557749 KRTAP13-2Q52LG2 175 aa6.67□□□□□ -1.34
LINC00648-204ENST00000557749 ANAPC11Q9NYG5 84 aa6.67□□□□□ -1.34
LINC00648-204ENST00000557749 TRAV23DV6A0A075B6W5 121 aa6.66□□□□□ -1.34
LINC00648-204ENST00000557749 C5orf52A6NGY3 159 aa6.66□□□□□ -1.34
LINC00648-204ENST00000557749 KRTAP4-16G5E9R7 235 aaPredicted RBP6.66□□□□□ -1.34
LINC00648-204ENST00000557749 IGLV6-57P01721 117 aa6.66□□□□□ -1.34
LINC00648-204ENST00000557749 SPANXCQ9NY87 97 aa6.66□□□□□ -1.34
LINC00648-204ENST00000557749 Q6ZRX8 168 aa6.65□□□□□ -1.34
LINC00648-204ENST00000557749 SMCR5Q8TEV8 140 aa6.65□□□□□ -1.34
LINC00648-204ENST00000557749 ZNF815PA8K554 130 aa6.64□□□□□ -1.35
LINC00648-204ENST00000557749 LINC00518Q8N0U6 118 aa6.64□□□□□ -1.35
LINC00648-204ENST00000557749 ZNF73O43830 326 aaPredicted RBP6.63□□□□□ -1.35
LINC00648-204ENST00000557749 C3orf79P0CE67 100 aa6.63□□□□□ -1.35
LINC00648-204ENST00000557749 KRTDAPP60985 99 aa6.63□□□□□ -1.35
LINC00648-204ENST00000557749 SNRPEP62304 92 aaKnown RBP6.63□□□□□ -1.35
LINC00648-204ENST00000557749 LINC00483Q53H64 154 aa6.63□□□□□ -1.35
LINC00648-204ENST00000557749 SPANXDQ9BXN6 97 aa6.63□□□□□ -1.35
LINC00648-204ENST00000557749 SPINK1P00995 79 aa6.62□□□□□ -1.35
LINC00648-204ENST00000557749 SLC25A34Q6PIV7 304 aa6.62□□□□□ -1.35
LINC00648-204ENST00000557749 SCGB1D4Q6XE38 83 aa6.62□□□□□ -1.35
LINC00648-204ENST00000557749 Q6ZVH6 145 aa6.62□□□□□ -1.35
LINC00648-204ENST00000557749 LINC00308Q8TCZ7 52 aa6.62□□□□□ -1.35
LINC00648-204ENST00000557749 ADAMTSL4-AS1Q5T5F5 129 aa6.61□□□□□ -1.35
LINC00648-204ENST00000557749 FP248Q71RG6 208 aaPredicted RBP6.61□□□□□ -1.35
LINC00648-204ENST00000557749 PPDPFQ9H3Y8 114 aa6.61□□□□□ -1.35
LINC00648-204ENST00000557749 A0A0U1RQV1 116 aa6.6□□□□□ -1.35
LINC00648-204ENST00000557749 NPC2P61916 151 aa6.6□□□□□ -1.35
LINC00648-204ENST00000557749 RPS29P62273 56 aaKnown RBP6.6□□□□□ -1.35
LINC00648-204ENST00000557749 GAGE2AQ6NT46 116 aa6.6□□□□□ -1.35
LINC00648-204ENST00000557749 SSBP3-AS1Q7Z2R9 100 aa6.6□□□□□ -1.35
LINC00648-204ENST00000557749 C3orf22Q8N5N4 141 aa6.6□□□□□ -1.35
LINC00648-204ENST00000557749 OR13C6PQ8NH95 151 aa6.6□□□□□ -1.35
LINC00648-204ENST00000557749 DHRS4-AS1Q9P1J3 65 aa6.6□□□□□ -1.35
LINC00648-204ENST00000557749 IFITM1P13164 125 aa6.59□□□□□ -1.35
LINC00648-204ENST00000557749 S100A1P23297 94 aa6.59□□□□□ -1.35
LINC00648-204ENST00000557749 TPRXLQ17RH7 258 aa6.59□□□□□ -1.35
LINC00648-204ENST00000557749 SOSTDC1Q6X4U4 206 aa6.59□□□□□ -1.35
LINC00648-204ENST00000557749 Q8NBF4 154 aa6.59□□□□□ -1.35
LINC00648-204ENST00000557749 LITAFQ99732 161 aa6.59□□□□□ -1.35
LINC00648-204ENST00000557749 IGLV7-46A0A075B6I9 117 aa6.58□□□□□ -1.36
LINC00648-204ENST00000557749 S100A2P29034 98 aa6.58□□□□□ -1.36
LINC00648-204ENST00000557749 Q9BRP9 147 aa6.57□□□□□ -1.36
LINC00648-204ENST00000557749 RNF213Q63HN8 5207 aa6.57□□□□□ -1.36
LINC00648-204ENST00000557749 HSBP1L1C9JCN9 74 aa6.56□□□□□ -1.36
LINC00648-204ENST00000557749 IGLV9-49A0A0B4J1Y8 123 aa6.55□□□□□ -1.36
LINC00648-204ENST00000557749 TRBV7-6A0A0J9YX20 115 aa6.55□□□□□ -1.36
LINC00648-204ENST00000557749 S100A6P06703 90 aa6.55□□□□□ -1.36
LINC00648-204ENST00000557749 MOBPQ13875 183 aa6.55□□□□□ -1.36
LINC00648-204ENST00000557749 RETNLBQ9BQ08 111 aa6.55□□□□□ -1.36
LINC00648-204ENST00000557749 LPAP08519 4548 aa6.55□□□□□ -1.36
LINC00648-204ENST00000557749 A4D1N5 150 aa6.54□□□□□ -1.36
LINC00648-204ENST00000557749 ERC2-IT1O76042 136 aa6.54□□□□□ -1.36
LINC00648-204ENST00000557749 C9orf153Q5TBE3 101 aa6.54□□□□□ -1.36
LINC00648-204ENST00000557749 SLC25A20O43772 301 aa6.53□□□□□ -1.36
LINC00648-204ENST00000557749 COX7BP24311 80 aa6.53□□□□□ -1.36
LINC00648-204ENST00000557749 ELOF1P60002 83 aaKnown RBP6.53□□□□□ -1.36
LINC00648-204ENST00000557749 NHP2Q9NX24 153 aaKnown RBP6.53□□□□□ -1.36
LINC00648-204ENST00000557749 TRAV13-2A0A0B4J235 113 aa6.52□□□□□ -1.37
LINC00648-204ENST00000557749 A0A1B0GWB2 263 aa6.52□□□□□ -1.37
LINC00648-204ENST00000557749 SPRR1BP22528 89 aa6.52□□□□□ -1.37
LINC00648-204ENST00000557749 TTTY13Q9BZ97 58 aa6.52□□□□□ -1.37
LINC00648-204ENST00000557749 LAMTOR3Q9UHA4 124 aa6.52□□□□□ -1.37
LINC00648-204ENST00000557749 C6orf99Q4VX62 202 aa6.51□□□□□ -1.37
LINC00648-204ENST00000557749 A6NDN8 102 aa6.5□□□□□ -1.37
LINC00648-204ENST00000557749 ATOH7Q8N100 152 aa6.5□□□□□ -1.37
LINC00648-204ENST00000557749 HIST3H2BBQ8N257 126 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 181.5 ms