RNA–Protein interactions for RNA: ENST00000557206.1

HIF1A-210, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 3

Gene HIF1A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-210ENST00000557206 LINC00959A0A1B0GUT2 108 aa1.31□□□□□ -2.2
HIF1A-210ENST00000557206 LY6G6CO95867 125 aa1.31□□□□□ -2.2
HIF1A-210ENST00000557206 PLNP26678 52 aa1.31□□□□□ -2.2
HIF1A-210ENST00000557206 UBE2DNLQ8IWF7 75 aa1.31□□□□□ -2.2
HIF1A-210ENST00000557206 CACNA1HO95180 2353 aa1.31□□□□□ -2.2
HIF1A-210ENST00000557206 C5orf42Q9H799 3197 aa1.31□□□□□ -2.2
HIF1A-210ENST00000557206 SZT2Q5T011 3432 aa1.31□□□□□ -2.2
HIF1A-210ENST00000557206 CEP192Q8TEP8 1941 aa1.3□□□□□ -2.2
HIF1A-210ENST00000557206 PIEZO1Q92508 2521 aa1.3□□□□□ -2.2
HIF1A-210ENST00000557206 PRUNE2Q8WUY3 3088 aa1.3□□□□□ -2.2
HIF1A-210ENST00000557206 UNC13CQ8NB66 2214 aa1.3□□□□□ -2.2
HIF1A-210ENST00000557206 UNC80Q8N2C7 3258 aa1.3□□□□□ -2.2
HIF1A-210ENST00000557206 SPTY2D1-AS1A0A0U1RR47 76 aa1.3□□□□□ -2.2
HIF1A-210ENST00000557206 MRPL33O75394 65 aaKnown RBP1.3□□□□□ -2.2
HIF1A-210ENST00000557206 RPL37P61927 97 aaKnown RBP1.3□□□□□ -2.2
HIF1A-210ENST00000557206 CACNA1EQ15878 2313 aa1.3□□□□□ -2.2
HIF1A-210ENST00000557206 CEP295Q9C0D2 2601 aa1.3□□□□□ -2.2
HIF1A-210ENST00000557206 PI4KAP42356 2102 aa1.3□□□□□ -2.2
HIF1A-210ENST00000557206 XIRP2A4UGR9 3374 aa1.3□□□□□ -2.2
HIF1A-210ENST00000557206 RP1P56715 2156 aa1.3□□□□□ -2.2
HIF1A-210ENST00000557206 ARFGEF3Q5TH69 2177 aa1.3□□□□□ -2.2
HIF1A-210ENST00000557206 FAM186AA6NE01 2351 aa1.29□□□□□ -2.2
HIF1A-210ENST00000557206 MAP1BP46821 2468 aaKnown RBP1.29□□□□□ -2.2
HIF1A-210ENST00000557206 RIF1Q5UIP0 2472 aaKnown RBP1.29□□□□□ -2.2
HIF1A-210ENST00000557206 LOC730098B7Z3J9 87 aa1.29□□□□□ -2.2
HIF1A-210ENST00000557206 K7EMI3 77 aa1.29□□□□□ -2.2
HIF1A-210ENST00000557206 DEFB114Q30KQ6 69 aa1.29□□□□□ -2.2
HIF1A-210ENST00000557206 PRO3102Q9H379 93 aa1.29□□□□□ -2.2
HIF1A-210ENST00000557206 ABRACLQ9P1F3 81 aa1.29□□□□□ -2.2
HIF1A-210ENST00000557206 TRIOO75962 3097 aa1.29□□□□□ -2.2
HIF1A-210ENST00000557206 SDK1Q7Z5N4 2213 aa1.29□□□□□ -2.2
HIF1A-210ENST00000557206 EYSQ5T1H1 3165 aa1.29□□□□□ -2.2
HIF1A-210ENST00000557206 CNOT1A5YKK6 2376 aaKnown RBP1.29□□□□□ -2.2
HIF1A-210ENST00000557206 SPTA1P02549 2419 aa1.29□□□□□ -2.2
HIF1A-210ENST00000557206 EP300Q09472 2414 aaPredicted RBP1.29□□□□□ -2.2
HIF1A-210ENST00000557206 A0A0C4DFX4 3053 aa1.29□□□□□ -2.2
HIF1A-210ENST00000557206 ZGRF1Q86YA3 2104 aa1.28□□□□□ -2.2
HIF1A-210ENST00000557206 KNL1Q8NG31 2342 aa1.28□□□□□ -2.2
HIF1A-210ENST00000557206 GVINP1Q7Z2Y8 2422 aa1.28□□□□□ -2.2
HIF1A-210ENST00000557206 COL6A3P12111 3177 aa1.28□□□□□ -2.2
HIF1A-210ENST00000557206 EXPH5Q8NEV8 1989 aa1.28□□□□□ -2.2
HIF1A-210ENST00000557206 PCDH15Q96QU1 1955 aa1.28□□□□□ -2.2
HIF1A-210ENST00000557206 TECTAO75443 2155 aa1.28□□□□□ -2.2
HIF1A-210ENST00000557206 PTPRZ1P23471 2315 aaPredicted RBP1.28□□□□□ -2.2
HIF1A-210ENST00000557206 CEP250Q9BV73 2442 aa1.28□□□□□ -2.2
HIF1A-210ENST00000557206 ANKRD11Q6UB99 2663 aaPredicted RBP1.28□□□□□ -2.2
HIF1A-210ENST00000557206 REV3LO60673 3130 aa1.28□□□□□ -2.2
HIF1A-210ENST00000557206 VCANP13611 3396 aa1.28□□□□□ -2.21
HIF1A-210ENST00000557206 ZNF292O60281 2723 aa1.27□□□□□ -2.21
HIF1A-210ENST00000557206 SPTBN4Q9H254 2564 aa1.27□□□□□ -2.21
HIF1A-210ENST00000557206 ACACAQ13085 2346 aa1.27□□□□□ -2.21
HIF1A-210ENST00000557206 ABCA4P78363 2273 aa1.27□□□□□ -2.21
HIF1A-210ENST00000557206 ETDCA0A1B0GVM5 59 aa1.27□□□□□ -2.21
HIF1A-210ENST00000557206 CPSF4LA6NMK7 179 aaKnown RBP1.27□□□□□ -2.21
HIF1A-210ENST00000557206 CCL22O00626 93 aa1.27□□□□□ -2.21
HIF1A-210ENST00000557206 DEFB133Q30KQ1 61 aa1.27□□□□□ -2.21
HIF1A-210ENST00000557206 BPTFQ12830 3046 aa1.27□□□□□ -2.21
HIF1A-210ENST00000557206 SPTBN2O15020 2390 aa1.27□□□□□ -2.21
HIF1A-210ENST00000557206 ASCC3Q8N3C0 2202 aaKnown RBP1.27□□□□□ -2.21
HIF1A-210ENST00000557206 ALPK2Q86TB3 2170 aa1.27□□□□□ -2.21
HIF1A-210ENST00000557206 HEATR1Q9H583 2144 aaKnown RBP1.27□□□□□ -2.21
HIF1A-210ENST00000557206 TNRC6BQ9UPQ9 1833 aaKnown RBP1.26□□□□□ -2.21
HIF1A-210ENST00000557206 CHD8Q9HCK8 2581 aa1.26□□□□□ -2.21
HIF1A-210ENST00000557206 MED12Q93074 2177 aa1.26□□□□□ -2.21
HIF1A-210ENST00000557206 FRYLO94915 3013 aa1.26□□□□□ -2.21
HIF1A-210ENST00000557206 M0R1W7 72 aa1.26□□□□□ -2.21
HIF1A-210ENST00000557206 COX14Q96I36 57 aa1.26□□□□□ -2.21
HIF1A-210ENST00000557206 KCNQ1DNQ9H478 68 aa1.26□□□□□ -2.21
HIF1A-210ENST00000557206 VPS13AQ96RL7 3174 aa1.26□□□□□ -2.21
HIF1A-210ENST00000557206 AHCTF1Q8WYP5 2266 aa1.26□□□□□ -2.21
HIF1A-210ENST00000557206 PRRC2CQ9Y520 2896 aaKnown RBP1.26□□□□□ -2.21
HIF1A-210ENST00000557206 IGF2RP11717 2491 aa1.25□□□□□ -2.21
HIF1A-210ENST00000557206 MUC3AQ02505 3323 aa1.25□□□□□ -2.21
HIF1A-210ENST00000557206 DEFB110Q30KQ9 67 aa1.25□□□□□ -2.21
HIF1A-210ENST00000557206 USMG5Q96IX5 58 aa1.25□□□□□ -2.21
HIF1A-210ENST00000557206 CRIPTQ9P021 101 aa1.25□□□□□ -2.21
HIF1A-210ENST00000557206 KNTC1P50748 2209 aa1.25□□□□□ -2.21
HIF1A-210ENST00000557206 LAMA1P25391 3075 aa1.25□□□□□ -2.21
HIF1A-210ENST00000557206 MYO18BQ8IUG5 2567 aa1.25□□□□□ -2.21
HIF1A-210ENST00000557206 NINQ8N4C6 2090 aa1.25□□□□□ -2.21
HIF1A-210ENST00000557206 NCOR2Q9Y618 2525 aa1.25□□□□□ -2.21
HIF1A-210ENST00000557206 ACACBO00763 2458 aa1.25□□□□□ -2.21
HIF1A-210ENST00000557206 TPRP12270 2363 aaKnown RBP1.25□□□□□ -2.21
HIF1A-210ENST00000557206 WDFY4Q6ZS81 3184 aa1.24□□□□□ -2.21
HIF1A-210ENST00000557206 CNTRLQ7Z7A1 2325 aa1.24□□□□□ -2.21
HIF1A-210ENST00000557206 CACNA1AO00555 2505 aa1.24□□□□□ -2.21
HIF1A-210ENST00000557206 SMIM27A0A1W2PRY6 76 aa1.24□□□□□ -2.21
HIF1A-210ENST00000557206 H0YGG7 62 aa1.24□□□□□ -2.21
HIF1A-210ENST00000557206 I3L3M4 83 aa1.24□□□□□ -2.21
HIF1A-210ENST00000557206 PIGYQ3MUY2 71 aa1.24□□□□□ -2.21
HIF1A-210ENST00000557206 DEFB124Q8NES8 71 aa1.24□□□□□ -2.21
HIF1A-210ENST00000557206 APC2O95996 2303 aa1.24□□□□□ -2.21
HIF1A-210ENST00000557206 RTTNQ86VV8 2226 aa1.24□□□□□ -2.21
HIF1A-210ENST00000557206 ASXL3Q9C0F0 2248 aa1.24□□□□□ -2.21
HIF1A-210ENST00000557206 TLN1Q9Y490 2541 aaKnown RBP1.24□□□□□ -2.21
HIF1A-210ENST00000557206 MYO7BQ6PIF6 2116 aa1.24□□□□□ -2.21
HIF1A-210ENST00000557206 FAM208BQ5VWN6 2430 aa1.24□□□□□ -2.21
HIF1A-210ENST00000557206 URB1O60287 2271 aaKnown RBP1.23□□□□□ -2.21
HIF1A-210ENST00000557206 PIEZO2Q9H5I5 2752 aa1.23□□□□□ -2.21
HIF1A-210ENST00000557206 DEFB131BA0A096LNP1 70 aa1.23□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms