RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 COPS9Q8WXC6 57 aa2.47□□□□□ -2.01
TRAV15-201ENST00000556680 NAA38Q9BRA0 125 aaKnown RBP2.47□□□□□ -2.01
TRAV15-201ENST00000556680 UPK3BQ9BT76 320 aa2.47□□□□□ -2.01
TRAV15-201ENST00000556680 SPANXDQ9BXN6 97 aa2.47□□□□□ -2.01
TRAV15-201ENST00000556680 SPANXCQ9NY87 97 aa2.47□□□□□ -2.01
TRAV15-201ENST00000556680 ERG28Q9UKR5 140 aa2.47□□□□□ -2.01
TRAV15-201ENST00000556680 HUWE1Q7Z6Z7 4374 aaKnown RBP2.47□□□□□ -2.01
TRAV15-201ENST00000556680 IBA57-AS1B1ANH7 110 aa2.46□□□□□ -2.02
TRAV15-201ENST00000556680 K7EP13 123 aa2.46□□□□□ -2.02
TRAV15-201ENST00000556680 TIMM17BO60830 172 aa2.46□□□□□ -2.02
TRAV15-201ENST00000556680 LY6G6CO95867 125 aa2.46□□□□□ -2.02
TRAV15-201ENST00000556680 PSMB2P49721 201 aa2.46□□□□□ -2.02
TRAV15-201ENST00000556680 TTC32Q5I0X7 151 aa2.46□□□□□ -2.02
TRAV15-201ENST00000556680 UNQ6190/PRO20217Q6UXQ8 127 aa2.46□□□□□ -2.02
TRAV15-201ENST00000556680 MIR7-3HGQ8N6C7 128 aa2.46□□□□□ -2.02
TRAV15-201ENST00000556680 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.45□□□□□ -2.02
TRAV15-201ENST00000556680 LOC107984156A0A0G2JMH3 177 aa2.45□□□□□ -2.02
TRAV15-201ENST00000556680 NBDYA0A0U1RRE5 68 aa2.45□□□□□ -2.02
TRAV15-201ENST00000556680 LRCOL1A6NCL2 159 aa2.45□□□□□ -2.02
TRAV15-201ENST00000556680 H3BUT2 72 aa2.45□□□□□ -2.02
TRAV15-201ENST00000556680 OXTP01178 125 aa2.45□□□□□ -2.02
TRAV15-201ENST00000556680 IFITM1P13164 125 aa2.45□□□□□ -2.02
TRAV15-201ENST00000556680 RPL18AQ02543 176 aaKnown RBP2.45□□□□□ -2.02
TRAV15-201ENST00000556680 C9orf116Q5BN46 136 aaPredicted RBP2.45□□□□□ -2.02
TRAV15-201ENST00000556680 LINC00336Q6ZUF6 198 aa2.45□□□□□ -2.02
TRAV15-201ENST00000556680 ARL17AQ8IVW1 177 aa2.45□□□□□ -2.02
TRAV15-201ENST00000556680 OR13C6PQ8NH95 151 aa2.45□□□□□ -2.02
TRAV15-201ENST00000556680 LINC00308Q8TCZ7 52 aa2.45□□□□□ -2.02
TRAV15-201ENST00000556680 CARD19Q96LW7 228 aa2.45□□□□□ -2.02
TRAV15-201ENST00000556680 C8orf17Q9NRJ1 99 aa2.45□□□□□ -2.02
TRAV15-201ENST00000556680 MGAM2Q2M2H8 2515 aa2.45□□□□□ -2.02
TRAV15-201ENST00000556680 CSMD3Q7Z407 3707 aa2.44□□□□□ -2.02
TRAV15-201ENST00000556680 DNAH9Q9NYC9 4486 aa2.44□□□□□ -2.02
TRAV15-201ENST00000556680 DYNC2H1Q8NCM8 4307 aaKnown RBP2.44□□□□□ -2.02
TRAV15-201ENST00000556680 TAX1BP3O14907 124 aa2.44□□□□□ -2.02
TRAV15-201ENST00000556680 NCR3O14931 201 aa2.44□□□□□ -2.02
TRAV15-201ENST00000556680 RTL8CO15255 209 aa2.44□□□□□ -2.02
TRAV15-201ENST00000556680 SCGB1C2P0DMR2 95 aa2.44□□□□□ -2.02
TRAV15-201ENST00000556680 Q6ZRU5 148 aa2.44□□□□□ -2.02
TRAV15-201ENST00000556680 CIRBP-AS1Q8TBR5 109 aa2.44□□□□□ -2.02
TRAV15-201ENST00000556680 SND1-IT1Q9HBX3 110 aa2.44□□□□□ -2.02
TRAV15-201ENST00000556680 LYSTQ99698 3801 aa2.44□□□□□ -2.02
TRAV15-201ENST00000556680 GVQW2A0A096LPI5 108 aaPredicted RBP2.43□□□□□ -2.02
TRAV15-201ENST00000556680 A0A0B4J2C4 111 aa2.43□□□□□ -2.02
TRAV15-201ENST00000556680 TRBV30A0A0K0K1B3 111 aa2.43□□□□□ -2.02
TRAV15-201ENST00000556680 C3orf84H3BNL1 204 aa2.43□□□□□ -2.02
TRAV15-201ENST00000556680 FABP2P12104 132 aa2.43□□□□□ -2.02
TRAV15-201ENST00000556680 COX17Q14061 63 aa2.43□□□□□ -2.02
TRAV15-201ENST00000556680 S100A7L2Q5SY68 101 aa2.43□□□□□ -2.02
TRAV15-201ENST00000556680 LYRM7Q5U5X0 104 aa2.43□□□□□ -2.02
TRAV15-201ENST00000556680 KRTAP26-1Q6PEX3 210 aa2.43□□□□□ -2.02
TRAV15-201ENST00000556680 SOSTDC1Q6X4U4 206 aa2.43□□□□□ -2.02
TRAV15-201ENST00000556680 C6orf48Q9UBA6 75 aa2.43□□□□□ -2.02
TRAV15-201ENST00000556680 PRO1854Q9UHT4 67 aa2.43□□□□□ -2.02
TRAV15-201ENST00000556680 TENM2Q9NT68 2774 aa2.43□□□□□ -2.02
TRAV15-201ENST00000556680 MEGF8Q7Z7M0 2845 aa2.42□□□□□ -2.02
TRAV15-201ENST00000556680 TRAV13-2A0A0B4J235 113 aa2.42□□□□□ -2.02
TRAV15-201ENST00000556680 LOC107984640A0A0U1RRK4 108 aa2.42□□□□□ -2.02
TRAV15-201ENST00000556680 A0A1W2PPM0 123 aa2.42□□□□□ -2.02
TRAV15-201ENST00000556680 GTF2H5Q6ZYL4 71 aa2.42□□□□□ -2.02
TRAV15-201ENST00000556680 XAGE1AQ9HD64 81 aa2.42□□□□□ -2.02
TRAV15-201ENST00000556680 SPCS1Q9Y6A9 102 aa2.42□□□□□ -2.02
TRAV15-201ENST00000556680 ALMS1Q8TCU4 4167 aa2.42□□□□□ -2.02
TRAV15-201ENST00000556680 PRKDCP78527 4128 aaKnown RBP2.41□□□□□ -2.02
TRAV15-201ENST00000556680 DNAH6Q9C0G6 4158 aa2.41□□□□□ -2.02
TRAV15-201ENST00000556680 IGKV2-24A0A0C4DH68 120 aa2.41□□□□□ -2.02
TRAV15-201ENST00000556680 COX6CP09669 75 aa2.41□□□□□ -2.02
TRAV15-201ENST00000556680 MOBPQ13875 183 aa2.41□□□□□ -2.02
TRAV15-201ENST00000556680 WFDC2Q14508 124 aa2.41□□□□□ -2.02
TRAV15-201ENST00000556680 C1orf134Q5TEV5 83 aa2.41□□□□□ -2.02
TRAV15-201ENST00000556680 FAM19A5Q7Z5A7 132 aaPredicted RBP2.41□□□□□ -2.02
TRAV15-201ENST00000556680 K7EP34 96 aa2.4□□□□□ -2.03
TRAV15-201ENST00000556680 NDUFC2O95298 119 aa2.4□□□□□ -2.03
TRAV15-201ENST00000556680 LINC00337Q8N6G1 96 aa2.4□□□□□ -2.03
TRAV15-201ENST00000556680 CLEC2BQ92478 149 aa2.4□□□□□ -2.03
TRAV15-201ENST00000556680 DPH3Q96FX2 82 aa2.4□□□□□ -2.03
TRAV15-201ENST00000556680 PKIGQ9Y2B9 76 aa2.4□□□□□ -2.03
TRAV15-201ENST00000556680 FRAS1Q86XX4 4008 aa2.39□□□□□ -2.03
TRAV15-201ENST00000556680 STARD9Q9P2P6 4700 aa2.39□□□□□ -2.03
TRAV15-201ENST00000556680 M0QXV9 152 aa2.39□□□□□ -2.03
TRAV15-201ENST00000556680 M0R378 163 aa2.39□□□□□ -2.03
TRAV15-201ENST00000556680 TCL1BO95988 128 aa2.39□□□□□ -2.03
TRAV15-201ENST00000556680 DNAL4O96015 105 aa2.39□□□□□ -2.03
TRAV15-201ENST00000556680 FUSP35637 526 aaKnown RBP eCLIP2.39□□□□□ -2.03
TRAV15-201ENST00000556680 ATXN8Q156A1 80 aa2.39□□□□□ -2.03
TRAV15-201ENST00000556680 C6orf99Q4VX62 202 aa2.39□□□□□ -2.03
TRAV15-201ENST00000556680 Q8N814 137 aa2.39□□□□□ -2.03
TRAV15-201ENST00000556680 SMIM11BQ8TCY0 68 aa2.39□□□□□ -2.03
TRAV15-201ENST00000556680 TMEM126AQ9H061 195 aa2.39□□□□□ -2.03
TRAV15-201ENST00000556680 TGP01266 2768 aa2.39□□□□□ -2.03
TRAV15-201ENST00000556680 STAB2Q8WWQ8 2551 aa2.39□□□□□ -2.03
TRAV15-201ENST00000556680 HECTD4Q9Y4D8 3996 aa2.39□□□□□ -2.03
TRAV15-201ENST00000556680 TRBV20-1A0A075B6N2 111 aa2.38□□□□□ -2.03
TRAV15-201ENST00000556680 TRAV23DV6A0A075B6W5 121 aa2.38□□□□□ -2.03
TRAV15-201ENST00000556680 A0A087WTM6 91 aa2.38□□□□□ -2.03
TRAV15-201ENST00000556680 A0A096LNI7 61 aa2.38□□□□□ -2.03
TRAV15-201ENST00000556680 TRBV10-3A0A0K0K1G6 114 aa2.38□□□□□ -2.03
TRAV15-201ENST00000556680 FAM240AA0A1B0GVK7 77 aa2.38□□□□□ -2.03
TRAV15-201ENST00000556680 C9JAW5 83 aa2.38□□□□□ -2.03
TRAV15-201ENST00000556680 H3BMG7 143 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms