RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 FAM168BA1KXE4 195 aa9.43□□□□□ -0.9
VPS33B-205ENST00000556096 KRTAP7-1Q8IUC3 87 aa9.43□□□□□ -0.9
VPS33B-205ENST00000556096 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.42□□□□□ -0.9
VPS33B-205ENST00000556096 PKIGQ9Y2B9 76 aa9.42□□□□□ -0.9
VPS33B-205ENST00000556096 C9orf163Q8N9P6 203 aa9.42□□□□□ -0.9
VPS33B-205ENST00000556096 IGLV1-50A0A075B6I6 118 aa9.41□□□□□ -0.9
VPS33B-205ENST00000556096 A0A096LNI7 61 aa9.41□□□□□ -0.9
VPS33B-205ENST00000556096 TMEM256-PLSCR3K7ERE1 68 aa9.41□□□□□ -0.9
VPS33B-205ENST00000556096 MRPL55Q7Z7F7 128 aaKnown RBP9.39□□□□□ -0.91
VPS33B-205ENST00000556096 LINC00528Q8N1L1 170 aa9.39□□□□□ -0.91
VPS33B-205ENST00000556096 OBSCN-AS1Q96MR7 158 aa9.39□□□□□ -0.91
VPS33B-205ENST00000556096 H3BQ85 93 aa9.39□□□□□ -0.91
VPS33B-205ENST00000556096 PRYO14603 147 aa9.39□□□□□ -0.91
VPS33B-205ENST00000556096 INAFM2P0DMQ5 153 aa9.39□□□□□ -0.91
VPS33B-205ENST00000556096 FAM19A5Q7Z5A7 132 aaPredicted RBP9.39□□□□□ -0.91
VPS33B-205ENST00000556096 A0A087WTM6 91 aa9.37□□□□□ -0.91
VPS33B-205ENST00000556096 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.37□□□□□ -0.91
VPS33B-205ENST00000556096 SPRR1AP35321 89 aa9.36□□□□□ -0.91
VPS33B-205ENST00000556096 IGKV2-24A0A0C4DH68 120 aa9.36□□□□□ -0.91
VPS33B-205ENST00000556096 FAM240AA0A1B0GVK7 77 aa9.36□□□□□ -0.91
VPS33B-205ENST00000556096 RPL37AP8A6NKH3 93 aa9.36□□□□□ -0.91
VPS33B-205ENST00000556096 SDIM1Q6ZPB5 146 aa9.36□□□□□ -0.91
VPS33B-205ENST00000556096 CDIP1Q9H305 208 aa9.36□□□□□ -0.91
VPS33B-205ENST00000556096 GHRHP01286 108 aa9.35□□□□□ -0.91
VPS33B-205ENST00000556096 Q6ZQY7 126 aa9.35□□□□□ -0.91
VPS33B-205ENST00000556096 FRAS1Q86XX4 4008 aa9.35□□□□□ -0.91
VPS33B-205ENST00000556096 A0A1W2PNN7 141 aa9.34□□□□□ -0.91
VPS33B-205ENST00000556096 KRTAP4-16G5E9R7 235 aaPredicted RBP9.34□□□□□ -0.91
VPS33B-205ENST00000556096 JMJD7-PLA2G4BH0Y9G9 81 aa9.34□□□□□ -0.91
VPS33B-205ENST00000556096 C1orf134Q5TEV5 83 aa9.34□□□□□ -0.91
VPS33B-205ENST00000556096 LINC00474Q9P2X8 69 aa9.34□□□□□ -0.91
VPS33B-205ENST00000556096 B5MCH6 92 aa9.32□□□□□ -0.92
VPS33B-205ENST00000556096 ACYP1P07311 99 aa9.32□□□□□ -0.92
VPS33B-205ENST00000556096 ETDCA0A1B0GVM5 59 aa9.31□□□□□ -0.92
VPS33B-205ENST00000556096 DNAH17Q9UFH2 4485 aa9.31□□□□□ -0.92
VPS33B-205ENST00000556096 CHTF8P0CG12 524 aa9.31□□□□□ -0.92
VPS33B-205ENST00000556096 Q6ZRX8 168 aa9.31□□□□□ -0.92
VPS33B-205ENST00000556096 SIGMAR1Q99720 223 aa9.31□□□□□ -0.92
VPS33B-205ENST00000556096 DHRS4-AS1Q9P1J3 65 aa9.31□□□□□ -0.92
VPS33B-205ENST00000556096 REG3GQ6UW15 175 aa9.3□□□□□ -0.92
VPS33B-205ENST00000556096 C14orf132Q9NPU4 83 aa9.3□□□□□ -0.92
VPS33B-205ENST00000556096 FAT2Q9NYQ8 4349 aa9.29□□□□□ -0.92
VPS33B-205ENST00000556096 RTL8CO15255 209 aa9.28□□□□□ -0.92
VPS33B-205ENST00000556096 EPM2AB3EWF7 344 aa9.26□□□□□ -0.93
VPS33B-205ENST00000556096 Q9BRP9 147 aa9.26□□□□□ -0.93
VPS33B-205ENST00000556096 LAMTOR3Q9UHA4 124 aa9.26□□□□□ -0.93
VPS33B-205ENST00000556096 RBM3P98179 157 aaKnown RBP9.25□□□□□ -0.93
VPS33B-205ENST00000556096 GAGE2AQ6NT46 116 aa9.25□□□□□ -0.93
VPS33B-205ENST00000556096 XGP55808 180 aa9.25□□□□□ -0.93
VPS33B-205ENST00000556096 PHF5AQ7RTV0 110 aaKnown RBP9.25□□□□□ -0.93
VPS33B-205ENST00000556096 SPACA4Q8TDM5 124 aa9.25□□□□□ -0.93
VPS33B-205ENST00000556096 PANO1I0J062 215 aa9.24□□□□□ -0.93
VPS33B-205ENST00000556096 CCKP06307 115 aa9.24□□□□□ -0.93
VPS33B-205ENST00000556096 TNP2Q05952 138 aa9.24□□□□□ -0.93
VPS33B-205ENST00000556096 HECTD4Q9Y4D8 3996 aa9.23□□□□□ -0.93
VPS33B-205ENST00000556096 LOC110117498A0A087WWA1 95 aa9.22□□□□□ -0.93
VPS33B-205ENST00000556096 A0A1B0GV72 72 aa9.22□□□□□ -0.93
VPS33B-205ENST00000556096 NDUFV3P56181 108 aaKnown RBP9.22□□□□□ -0.93
VPS33B-205ENST00000556096 DNAH11Q96DT5 4516 aa9.22□□□□□ -0.93
VPS33B-205ENST00000556096 MT-ATP8P03928 68 aa9.22□□□□□ -0.93
VPS33B-205ENST00000556096 UBE2BP63146 152 aa9.22□□□□□ -0.93
VPS33B-205ENST00000556096 DPH3Q96FX2 82 aa9.22□□□□□ -0.93
VPS33B-205ENST00000556096 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.22□□□□□ -0.93
VPS33B-205ENST00000556096 PDE6GP18545 87 aa9.21□□□□□ -0.94
VPS33B-205ENST00000556096 LINC01547P58512 204 aaPredicted RBP9.21□□□□□ -0.94
VPS33B-205ENST00000556096 PKD1P98161 4303 aa9.2□□□□□ -0.94
VPS33B-205ENST00000556096 IGLV5-52A0A0A0MRZ9 124 aa9.2□□□□□ -0.94
VPS33B-205ENST00000556096 Q8N377 158 aa9.2□□□□□ -0.94
VPS33B-205ENST00000556096 EPPK1P58107 5090 aaKnown RBP9.2□□□□□ -0.94
VPS33B-205ENST00000556096 IGLV5-48A0A075B6I7 105 aa9.19□□□□□ -0.94
VPS33B-205ENST00000556096 FUSP35637 526 aaKnown RBP eCLIP9.19□□□□□ -0.94
VPS33B-205ENST00000556096 Q6ZQT0 140 aa9.19□□□□□ -0.94
VPS33B-205ENST00000556096 FAM19A1Q7Z5A9 133 aa9.19□□□□□ -0.94
VPS33B-205ENST00000556096 KRTAP11-1Q8IUC1 163 aa9.19□□□□□ -0.94
VPS33B-205ENST00000556096 SMCR5Q8TEV8 140 aa9.19□□□□□ -0.94
VPS33B-205ENST00000556096 DSCR8Q96T75 97 aa9.19□□□□□ -0.94
VPS33B-205ENST00000556096 H0Y9J4 135 aa9.19□□□□□ -0.94
VPS33B-205ENST00000556096 ERC2-IT1O76042 136 aa9.18□□□□□ -0.94
VPS33B-205ENST00000556096 TRBV7-4A0A0J9YYF1 115 aa9.17□□□□□ -0.94
VPS33B-205ENST00000556096 C21orf62-AS1Q17RA5 79 aa9.17□□□□□ -0.94
VPS33B-205ENST00000556096 DEFB105AQ8NG35 78 aa9.17□□□□□ -0.94
VPS33B-205ENST00000556096 SCGB1A1P11684 91 aa9.17□□□□□ -0.94
VPS33B-205ENST00000556096 LINC00643Q86TS7 51 aa9.17□□□□□ -0.94
VPS33B-205ENST00000556096 LINC00336Q6ZUF6 198 aa9.16□□□□□ -0.94
VPS33B-205ENST00000556096 ST20-AS1Q8NBB2 130 aa9.16□□□□□ -0.94
VPS33B-205ENST00000556096 PLAC8Q9NZF1 115 aa9.16□□□□□ -0.94
VPS33B-205ENST00000556096 PRLHP81277 87 aa9.15□□□□□ -0.94
VPS33B-205ENST00000556096 LINC00846Q9NV44 126 aa9.15□□□□□ -0.94
VPS33B-205ENST00000556096 BCE1O60756 84 aa9.14□□□□□ -0.95
VPS33B-205ENST00000556096 DNAH5Q8TE73 4624 aa9.13□□□□□ -0.95
VPS33B-205ENST00000556096 A0A1B0GVY2 172 aa9.12□□□□□ -0.95
VPS33B-205ENST00000556096 KRTAP10-2P60368 255 aa9.12□□□□□ -0.95
VPS33B-205ENST00000556096 Q6Q795 121 aa9.11□□□□□ -0.95
VPS33B-205ENST00000556096 HIGD2AQ9BW72 106 aa9.11□□□□□ -0.95
VPS33B-205ENST00000556096 UBE2AP49459 152 aa9.11□□□□□ -0.95
VPS33B-205ENST00000556096 KRTAP13-1Q8IUC0 172 aa9.1□□□□□ -0.95
VPS33B-205ENST00000556096 TRBV7-7A0A0K0K1E9 115 aa9.09□□□□□ -0.95
VPS33B-205ENST00000556096 PCP4P48539 62 aa9.09□□□□□ -0.95
VPS33B-205ENST00000556096 PKHD1P08F94 4074 aa9.09□□□□□ -0.95
VPS33B-205ENST00000556096 BIRC6Q9NR09 4857 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms