RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 Q6ZTC4 211 aa4.66□□□□□ -1.66
TDP1-213ENST00000555880 FAM19A1Q7Z5A9 133 aa4.66□□□□□ -1.66
TDP1-213ENST00000555880 RETNQ9HD89 108 aa4.66□□□□□ -1.66
TDP1-213ENST00000555880 J3KT08 172 aa4.65□□□□□ -1.66
TDP1-213ENST00000555880 TMEM258P61165 79 aa4.65□□□□□ -1.66
TDP1-213ENST00000555880 HAMPP81172 84 aa4.65□□□□□ -1.66
TDP1-213ENST00000555880 Q6ZRU5 148 aa4.65□□□□□ -1.66
TDP1-213ENST00000555880 C15orf56Q8N910 161 aa4.65□□□□□ -1.66
TDP1-213ENST00000555880 IGKV2D-24A0A075B6R9 120 aa4.64□□□□□ -1.67
TDP1-213ENST00000555880 LINC01547P58512 204 aaPredicted RBP4.64□□□□□ -1.67
TDP1-213ENST00000555880 CXCL6P80162 114 aa4.64□□□□□ -1.67
TDP1-213ENST00000555880 ESRGQ1W209 222 aa4.64□□□□□ -1.67
TDP1-213ENST00000555880 LINC01556Q5JQF7 62 aa4.64□□□□□ -1.67
TDP1-213ENST00000555880 KRTAP26-1Q6PEX3 210 aa4.64□□□□□ -1.67
TDP1-213ENST00000555880 Q6ZVQ6 151 aa4.64□□□□□ -1.67
TDP1-213ENST00000555880 NKAPP1Q8N9T2 125 aa4.64□□□□□ -1.67
TDP1-213ENST00000555880 DEFB131BA0A096LNP1 70 aa4.63□□□□□ -1.67
TDP1-213ENST00000555880 TRBV7-4A0A0J9YYF1 115 aa4.63□□□□□ -1.67
TDP1-213ENST00000555880 BCE1O60756 84 aa4.63□□□□□ -1.67
TDP1-213ENST00000555880 KRTAP10-11P60412 298 aa4.63□□□□□ -1.67
TDP1-213ENST00000555880 SYCNQ0VAF6 134 aa4.63□□□□□ -1.67
TDP1-213ENST00000555880 C11orf45Q8TAV5 145 aa4.63□□□□□ -1.67
TDP1-213ENST00000555880 M0R2N4 97 aa4.61□□□□□ -1.67
TDP1-213ENST00000555880 RPS28P62857 69 aaKnown RBP4.61□□□□□ -1.67
TDP1-213ENST00000555880 LCE5AQ5TCM9 118 aa4.61□□□□□ -1.67
TDP1-213ENST00000555880 Q6ZRP5 223 aa4.61□□□□□ -1.67
TDP1-213ENST00000555880 PKD1L1Q8TDX9 2849 aa4.61□□□□□ -1.67
TDP1-213ENST00000555880 TENM3Q9P273 2699 aa4.61□□□□□ -1.67
TDP1-213ENST00000555880 TRAV7A0A075B6U4 112 aa4.6□□□□□ -1.67
TDP1-213ENST00000555880 CYSTM1Q9H1C7 97 aa4.6□□□□□ -1.67
TDP1-213ENST00000555880 DNAH10OSP0CZ25 163 aa4.6□□□□□ -1.67
TDP1-213ENST00000555880 KRTAP9-3Q9BYQ3 159 aa4.6□□□□□ -1.67
TDP1-213ENST00000555880 STAB1Q9NY15 2570 aa4.6□□□□□ -1.67
TDP1-213ENST00000555880 TRRAPQ9Y4A5 3859 aa4.6□□□□□ -1.67
TDP1-213ENST00000555880 C20orf197Q8N268 126 aa4.59□□□□□ -1.67
TDP1-213ENST00000555880 KCNQ1DNQ9H478 68 aa4.59□□□□□ -1.67
TDP1-213ENST00000555880 LOC107984640A0A0U1RRK4 108 aa4.58□□□□□ -1.68
TDP1-213ENST00000555880 RMI2Q96E14 147 aa4.58□□□□□ -1.68
TDP1-213ENST00000555880 DPH3Q96FX2 82 aa4.58□□□□□ -1.68
TDP1-213ENST00000555880 DHRS4-AS1Q9P1J3 65 aa4.58□□□□□ -1.68
TDP1-213ENST00000555880 TRAV10A0A0B4J240 114 aa4.58□□□□□ -1.68
TDP1-213ENST00000555880 TLX1NBP0CAT3 122 aa4.58□□□□□ -1.68
TDP1-213ENST00000555880 MRAPQ8TCY5 172 aa4.58□□□□□ -1.68
TDP1-213ENST00000555880 C7orf33Q8WU49 177 aa4.58□□□□□ -1.68
TDP1-213ENST00000555880 KRTAP4-5Q9BYR2 181 aa4.58□□□□□ -1.68
TDP1-213ENST00000555880 PLA2G2DQ9UNK4 145 aa4.58□□□□□ -1.68
TDP1-213ENST00000555880 NREPQ16612 68 aa4.57□□□□□ -1.68
TDP1-213ENST00000555880 SERTAD4-AS1Q5TG53 156 aa4.57□□□□□ -1.68
TDP1-213ENST00000555880 SCXQ7RTU7 201 aa4.57□□□□□ -1.68
TDP1-213ENST00000555880 DEFB105AQ8NG35 78 aa4.57□□□□□ -1.68
TDP1-213ENST00000555880 ETDCA0A1B0GVM5 59 aa4.56□□□□□ -1.68
TDP1-213ENST00000555880 PRYO14603 147 aa4.56□□□□□ -1.68
TDP1-213ENST00000555880 NOTCH1P46531 2555 aa4.56□□□□□ -1.68
TDP1-213ENST00000555880 FUSP35637 526 aaKnown RBP eCLIP4.56□□□□□ -1.68
TDP1-213ENST00000555880 Q6ZRX8 168 aa4.56□□□□□ -1.68
TDP1-213ENST00000555880 FAM19A5Q7Z5A7 132 aaPredicted RBP4.56□□□□□ -1.68
TDP1-213ENST00000555880 IGLV5-37A0A075B6J1 123 aa4.55□□□□□ -1.68
TDP1-213ENST00000555880 FAM236DA0A1B0GTK5 79 aa4.55□□□□□ -1.68
TDP1-213ENST00000555880 A0A1B0GW54 56 aa4.55□□□□□ -1.68
TDP1-213ENST00000555880 FAM236CP0DP71 79 aa4.55□□□□□ -1.68
TDP1-213ENST00000555880 KLKP1Q107X0 134 aa4.55□□□□□ -1.68
TDP1-213ENST00000555880 RPL37AP8A6NKH3 93 aa4.54□□□□□ -1.68
TDP1-213ENST00000555880 BPY2O14599 106 aa4.54□□□□□ -1.68
TDP1-213ENST00000555880 LINC00588Q9Y4M8 146 aa4.54□□□□□ -1.68
TDP1-213ENST00000555880 IGLV1-50A0A075B6I6 118 aa4.54□□□□□ -1.68
TDP1-213ENST00000555880 IGLV5-48A0A075B6I7 105 aa4.54□□□□□ -1.68
TDP1-213ENST00000555880 C3orf84H3BNL1 204 aa4.54□□□□□ -1.68
TDP1-213ENST00000555880 NDUFC1O43677 76 aa4.54□□□□□ -1.68
TDP1-213ENST00000555880 Q8N377 158 aa4.54□□□□□ -1.68
TDP1-213ENST00000555880 FAM168BA1KXE4 195 aa4.52□□□□□ -1.69
TDP1-213ENST00000555880 H7BZZ5 65 aa4.52□□□□□ -1.69
TDP1-213ENST00000555880 MRPL55Q7Z7F7 128 aaKnown RBP4.52□□□□□ -1.69
TDP1-213ENST00000555880 SNURFQ9Y675 71 aa4.52□□□□□ -1.69
TDP1-213ENST00000555880 NBEAL1Q6ZS30 2694 aa4.52□□□□□ -1.69
TDP1-213ENST00000555880 KRTAP4-16G5E9R7 235 aaPredicted RBP4.52□□□□□ -1.69
TDP1-213ENST00000555880 ERC2-IT1O76042 136 aa4.52□□□□□ -1.69
TDP1-213ENST00000555880 PRB2P02812 416 aaPredicted RBP4.52□□□□□ -1.69
TDP1-213ENST00000555880 IGKV4-1P06312 121 aa4.52□□□□□ -1.69
TDP1-213ENST00000555880 SPRR1AP35321 89 aa4.52□□□□□ -1.69
TDP1-213ENST00000555880 TM2D3Q9BRN9 247 aa4.52□□□□□ -1.69
TDP1-213ENST00000555880 Q9BRP9 147 aa4.52□□□□□ -1.69
TDP1-213ENST00000555880 UBE2BP63146 152 aa4.51□□□□□ -1.69
TDP1-213ENST00000555880 C1orf137Q5JT78 98 aa4.51□□□□□ -1.69
TDP1-213ENST00000555880 CASC10Q5T4H9 136 aa4.51□□□□□ -1.69
TDP1-213ENST00000555880 Q8N9L7 120 aa4.51□□□□□ -1.69
TDP1-213ENST00000555880 SERP1Q9Y6X1 66 aa4.51□□□□□ -1.69
TDP1-213ENST00000555880 FBN1P35555 2871 aaKnown RBP4.5□□□□□ -1.69
TDP1-213ENST00000555880 F8WEM9 126 aa4.5□□□□□ -1.69
TDP1-213ENST00000555880 ATP5EP56381 51 aaPredicted RBP4.5□□□□□ -1.69
TDP1-213ENST00000555880 REG3GQ6UW15 175 aa4.5□□□□□ -1.69
TDP1-213ENST00000555880 K7EIL1 84 aa4.49□□□□□ -1.69
TDP1-213ENST00000555880 Q8NBF4 154 aa4.49□□□□□ -1.69
TDP1-213ENST00000555880 TMEM254Q8TBM7 123 aa4.49□□□□□ -1.69
TDP1-213ENST00000555880 COL6A5A8TX70 2615 aa4.49□□□□□ -1.69
TDP1-213ENST00000555880 OXTP01178 125 aa4.49□□□□□ -1.69
TDP1-213ENST00000555880 KRTAP10-2P60368 255 aa4.49□□□□□ -1.69
TDP1-213ENST00000555880 ST20-AS1Q8NBB2 130 aa4.49□□□□□ -1.69
TDP1-213ENST00000555880 A0A1W2PNM2 257 aa4.48□□□□□ -1.69
TDP1-213ENST00000555880 C5orf47Q569G3 176 aa4.48□□□□□ -1.69
TDP1-213ENST00000555880 PSCAO43653 123 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms