RNA–Protein interactions for RNA: ENST00000555573.5

KTN1-223, Transcript of kinectin 1, humanhuman

TSL 2 BASIC

Gene KTN1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-223ENST00000555573 DNMBPQ6XZF7 1577 aa0.6□□□□□ -2.31
KTN1-223ENST00000555573 ZFYVE26Q68DK2 2539 aa0.6□□□□□ -2.31
KTN1-223ENST00000555573 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.6□□□□□ -2.311e-8■□□□□ 8.4
KTN1-223ENST00000555573 KMT2DO14686 5537 aa0.6□□□□□ -2.31
KTN1-223ENST00000555573 DEFA5Q01523 94 aa0.6□□□□□ -2.31
KTN1-223ENST00000555573 NREPQ16612 68 aa0.6□□□□□ -2.31
KTN1-223ENST00000555573 PARP4Q9UKK3 1724 aaKnown RBP0.6□□□□□ -2.31
KTN1-223ENST00000555573 EIF2AK4Q9P2K8 1649 aaKnown RBP0.59□□□□□ -2.31
KTN1-223ENST00000555573 KLK9Q2XQG4 91 aa0.59□□□□□ -2.31
KTN1-223ENST00000555573 KRTAP21-1Q3LI58 79 aa0.59□□□□□ -2.31
KTN1-223ENST00000555573 ZC3H13Q5T200 1668 aaKnown RBP0.59□□□□□ -2.31
KTN1-223ENST00000555573 USP24Q9UPU5 2620 aa0.59□□□□□ -2.32
KTN1-223ENST00000555573 PDCD5O14737 125 aa0.58□□□□□ -2.32
KTN1-223ENST00000555573 HEPN1Q6WQI6 88 aa0.58□□□□□ -2.32
KTN1-223ENST00000555573 WIZO95785 1651 aa0.58□□□□□ -2.32
KTN1-223ENST00000555573 DDX60LQ5H9U9 1706 aaKnown RBP0.58□□□□□ -2.32
KTN1-223ENST00000555573 H1FX-AS1Q4G0G2 97 aa0.58□□□□□ -2.32
KTN1-223ENST00000555573 CD163L1Q9NR16 1453 aa0.58□□□□□ -2.32
KTN1-223ENST00000555573 NAV2Q8IVL1 2488 aa0.57□□□□□ -2.32
KTN1-223ENST00000555573 CICQ96RK0 1608 aaPredicted RBP0.57□□□□□ -2.32
KTN1-223ENST00000555573 ITSN1Q15811 1721 aa0.57□□□□□ -2.32
KTN1-223ENST00000555573 CHD6Q8TD26 2715 aa0.57□□□□□ -2.32
KTN1-223ENST00000555573 SPINK4O60575 86 aa0.57□□□□□ -2.32
KTN1-223ENST00000555573 LMTK2Q8IWU2 1503 aa0.57□□□□□ -2.32
KTN1-223ENST00000555573 ADAMTS12P58397 1594 aa0.57□□□□□ -2.32
KTN1-223ENST00000555573 C4AP0C0L4 1744 aa0.57□□□□□ -2.32
KTN1-223ENST00000555573 C4BP0C0L5 1744 aa0.57□□□□□ -2.32
KTN1-223ENST00000555573 CNOT1A5YKK6 2376 aaKnown RBP0.56□□□□□ -2.32
KTN1-223ENST00000555573 DUOX2Q9NRD8 1548 aa0.56□□□□□ -2.32
KTN1-223ENST00000555573 H3BVH4 76 aa0.56□□□□□ -2.32
KTN1-223ENST00000555573 U3KQA8 63 aa0.56□□□□□ -2.32
KTN1-223ENST00000555573 MUC2Q02817 5179 aa0.56□□□□□ -2.32
KTN1-223ENST00000555573 UBR4Q5T4S7 5183 aa0.56□□□□□ -2.32
KTN1-223ENST00000555573 LELP1Q5T871 98 aa0.55□□□□□ -2.32
KTN1-223ENST00000555573 NDUFA4O00483 81 aa0.55□□□□□ -2.32
KTN1-223ENST00000555573 NRAPQ86VF7 1730 aa0.55□□□□□ -2.32
KTN1-223ENST00000555573 VWFP04275 2813 aa0.54□□□□□ -2.32
KTN1-223ENST00000555573 ANKRD50Q9ULJ7 1429 aa0.54□□□□□ -2.32
KTN1-223ENST00000555573 LCE6AA0A183 80 aa0.54□□□□□ -2.32
KTN1-223ENST00000555573 ABCA9Q8IUA7 1624 aa0.54□□□□□ -2.32
KTN1-223ENST00000555573 MROH1Q8NDA8 1641 aa0.54□□□□□ -2.32
KTN1-223ENST00000555573 CDC42BPGQ6DT37 1551 aa0.54□□□□□ -2.32
KTN1-223ENST00000555573 CDKN2A-AS1Q9UH64 79 aa0.53□□□□□ -2.32
KTN1-223ENST00000555573 NCOR1O75376 2440 aa0.53□□□□□ -2.32
KTN1-223ENST00000555573 HMGA1P17096 107 aaKnown RBP0.52□□□□□ -2.33
KTN1-223ENST00000555573 ATRQ13535 2644 aa0.52□□□□□ -2.33
KTN1-223ENST00000555573 CELSR1Q9NYQ6 3014 aa0.52□□□□□ -2.33
KTN1-223ENST00000555573 TENM4Q6N022 2769 aa0.51□□□□□ -2.33
KTN1-223ENST00000555573 COX6B2Q6YFQ2 88 aa0.51□□□□□ -2.33
KTN1-223ENST00000555573 HILPDAQ9Y5L2 63 aa0.51□□□□□ -2.33
KTN1-223ENST00000555573 TJP1Q07157 1748 aa0.51□□□□□ -2.33
KTN1-223ENST00000555573 ASXL1Q8IXJ9 1541 aa0.51□□□□□ -2.33
KTN1-223ENST00000555573 WNK2Q9Y3S1 2297 aa0.51□□□□□ -2.33
KTN1-223ENST00000555573 MADDQ8WXG6 1647 aa0.5□□□□□ -2.33
KTN1-223ENST00000555573 KIAA1109Q2LD37 5005 aa0.5□□□□□ -2.33
KTN1-223ENST00000555573 NDUFA3O95167 84 aa0.5□□□□□ -2.33
KTN1-223ENST00000555573 SYNE1Q8NF91 8797 aaKnown RBP0.5□□□□□ -2.33
KTN1-223ENST00000555573 NHSQ6T4R5 1651 aa0.5□□□□□ -2.33
KTN1-223ENST00000555573 CSPG4Q6UVK1 2322 aa0.5□□□□□ -2.33
KTN1-223ENST00000555573 WFDC13Q8IUB5 93 aa0.5□□□□□ -2.33
KTN1-223ENST00000555573 SPTA1P02549 2419 aa0.49□□□□□ -2.33
KTN1-223ENST00000555573 HFM1A2PYH4 1435 aa0.49□□□□□ -2.33
KTN1-223ENST00000555573 PHGR1C9JFL3 82 aa0.49□□□□□ -2.33
KTN1-223ENST00000555573 RALGAPBQ86X10 1494 aa0.49□□□□□ -2.33
KTN1-223ENST00000555573 ANKHD1Q8IWZ3 2542 aaKnown RBP0.49□□□□□ -2.33
KTN1-223ENST00000555573 LOC730098B7Z3J9 87 aa0.48□□□□□ -2.33
KTN1-223ENST00000555573 DIP2AQ14689 1571 aa0.48□□□□□ -2.33
KTN1-223ENST00000555573 EFCAB5A4FU69 1503 aa0.48□□□□□ -2.33
KTN1-223ENST00000555573 CCDC180Q9P1Z9 1646 aa0.48□□□□□ -2.33
KTN1-223ENST00000555573 ATXN8Q156A1 80 aa0.47□□□□□ -2.33
KTN1-223ENST00000555573 GNG13Q9P2W3 67 aa0.47□□□□□ -2.33
KTN1-223ENST00000555573 INO80Q9ULG1 1556 aaPredicted RBP0.47□□□□□ -2.33
KTN1-223ENST00000555573 NCOR2Q9Y618 2525 aa0.47□□□□□ -2.33
KTN1-223ENST00000555573 PKD1L1Q8TDX9 2849 aa0.46□□□□□ -2.34
KTN1-223ENST00000555573 UBR5O95071 2799 aaPredicted RBP0.46□□□□□ -2.34
KTN1-223ENST00000555573 RNF17Q9BXT8 1623 aaKnown RBP0.46□□□□□ -2.34
KTN1-223ENST00000555573 PTPN13Q12923 2485 aa0.46□□□□□ -2.34
KTN1-223ENST00000555573 KNL1Q8NG31 2342 aa0.45□□□□□ -2.34
KTN1-223ENST00000555573 ENHOQ6UWT2 76 aa0.45□□□□□ -2.34
KTN1-223ENST00000555573 SSPOA2VEC9 5147 aa0.45□□□□□ -2.34
KTN1-223ENST00000555573 TRANK1O15050 2925 aa0.44□□□□□ -2.34
KTN1-223ENST00000555573 LRP1Q07954 4544 aaKnown RBP0.44□□□□□ -2.34
KTN1-223ENST00000555573 PRO3102Q9H379 93 aa0.44□□□□□ -2.34
KTN1-223ENST00000555573 THOC2Q8NI27 1593 aaKnown RBP0.44□□□□□ -2.34
KTN1-223ENST00000555573 PKD1L2Q7Z442 2459 aa0.44□□□□□ -2.34
KTN1-223ENST00000555573 PLXNC1O60486 1568 aa0.44□□□□□ -2.34
KTN1-223ENST00000555573 UBL5Q9BZL1 73 aa0.44□□□□□ -2.34
KTN1-223ENST00000555573 ABCA2Q9BZC7 2435 aa0.43□□□□□ -2.34
KTN1-223ENST00000555573 KMT2CQ8NEZ4 4911 aaKnown RBP0.43□□□□□ -2.34
KTN1-223ENST00000555573 BSNQ9UPA5 3926 aa0.43□□□□□ -2.34
KTN1-223ENST00000555573 ERICH3Q5RHP9 1530 aa0.43□□□□□ -2.34
KTN1-223ENST00000555573 C3orf79P0CE67 100 aa0.42□□□□□ -2.34
KTN1-223ENST00000555573 LINC00158P58513 81 aa0.42□□□□□ -2.34
KTN1-223ENST00000555573 DEPDC5O75140 1603 aa0.42□□□□□ -2.34
KTN1-223ENST00000555573 FAT2Q9NYQ8 4349 aa0.42□□□□□ -2.34
KTN1-223ENST00000555573 HIVEP3Q5T1R4 2406 aa0.42□□□□□ -2.34
KTN1-223ENST00000555573 SMIM31A0A1B0GVY4 71 aa0.41□□□□□ -2.34
KTN1-223ENST00000555573 MRPL33O75394 65 aaKnown RBP0.41□□□□□ -2.34
KTN1-223ENST00000555573 KCNQ1DNQ9H478 68 aa0.41□□□□□ -2.34
KTN1-223ENST00000555573 MAST4O15021 2626 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms