RNA–Protein interactions for RNA: ENST00000555537.1

NEK9-206, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 675 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-206ENST00000555537 TRBV27A0A0K0K1C4 114 aa4.86□□□□□ -1.63
NEK9-206ENST00000555537 SCGB1C2P0DMR2 95 aa4.86□□□□□ -1.63
NEK9-206ENST00000555537 CRYGAP11844 174 aa4.86□□□□□ -1.63
NEK9-206ENST00000555537 LINC01547P58512 204 aaPredicted RBP4.86□□□□□ -1.63
NEK9-206ENST00000555537 Q6Q795 121 aa4.86□□□□□ -1.63
NEK9-206ENST00000555537 CSDC2Q9Y534 153 aaKnown RBP4.86□□□□□ -1.63
NEK9-206ENST00000555537 IGHV3OR16-9A0A0B4J2B5 98 aa4.85□□□□□ -1.63
NEK9-206ENST00000555537 LOC107984156A0A0G2JMH3 177 aa4.85□□□□□ -1.63
NEK9-206ENST00000555537 LEPROTO15243 131 aa4.85□□□□□ -1.63
NEK9-206ENST00000555537 COX6CP09669 75 aa4.85□□□□□ -1.63
NEK9-206ENST00000555537 SPINK8P0C7L1 97 aa4.85□□□□□ -1.63
NEK9-206ENST00000555537 ATXN8Q156A1 80 aa4.85□□□□□ -1.63
NEK9-206ENST00000555537 TPRXLQ17RH7 258 aa4.85□□□□□ -1.63
NEK9-206ENST00000555537 KRTAP13-2Q52LG2 175 aa4.85□□□□□ -1.63
NEK9-206ENST00000555537 C2orf82Q6UX34 121 aa4.85□□□□□ -1.63
NEK9-206ENST00000555537 ARL17AQ8IVW1 177 aa4.85□□□□□ -1.63
NEK9-206ENST00000555537 SPANXCQ9NY87 97 aa4.85□□□□□ -1.63
NEK9-206ENST00000555537 FAM240AA0A1B0GVK7 77 aa4.84□□□□□ -1.63
NEK9-206ENST00000555537 IGIPA6NJ69 53 aa4.84□□□□□ -1.63
NEK9-206ENST00000555537 F8WDY8 70 aa4.84□□□□□ -1.63
NEK9-206ENST00000555537 H3BT86 120 aa4.84□□□□□ -1.63
NEK9-206ENST00000555537 J3QQQ9 107 aa4.84□□□□□ -1.63
NEK9-206ENST00000555537 KIAA0087Q14695 138 aa4.84□□□□□ -1.63
NEK9-206ENST00000555537 LINC00242Q5T6M2 205 aa4.84□□□□□ -1.63
NEK9-206ENST00000555537 FAM104AQ969W3 186 aa4.84□□□□□ -1.63
NEK9-206ENST00000555537 KRTAP4-1Q9BYQ7 146 aa4.84□□□□□ -1.63
NEK9-206ENST00000555537 PPDPFQ9H3Y8 114 aa4.84□□□□□ -1.63
NEK9-206ENST00000555537 GEMIN7Q9H840 131 aaKnown RBP4.84□□□□□ -1.63
NEK9-206ENST00000555537 C22orf24Q9Y442 160 aa4.84□□□□□ -1.63
NEK9-206ENST00000555537 A0A0J9YXY3 114 aa4.83□□□□□ -1.64
NEK9-206ENST00000555537 TIMM17BO60830 172 aa4.83□□□□□ -1.64
NEK9-206ENST00000555537 PSMB2P49721 201 aa4.83□□□□□ -1.64
NEK9-206ENST00000555537 RPL39P62891 51 aaKnown RBP4.83□□□□□ -1.64
NEK9-206ENST00000555537 TTTY13Q9BZ97 58 aa4.83□□□□□ -1.64
NEK9-206ENST00000555537 ERG28Q9UKR5 140 aa4.83□□□□□ -1.64
NEK9-206ENST00000555537 PYGO1Q9Y3Y4 419 aa4.83□□□□□ -1.64
NEK9-206ENST00000555537 TRBV30A0A0K0K1B3 111 aa4.82□□□□□ -1.64
NEK9-206ENST00000555537 NDUFC2-KCTD14E9PQ53 114 aa4.82□□□□□ -1.64
NEK9-206ENST00000555537 SLC25A20O43772 301 aa4.82□□□□□ -1.64
NEK9-206ENST00000555537 SNCGO76070 127 aa4.82□□□□□ -1.64
NEK9-206ENST00000555537 ACYP1P07311 99 aa4.82□□□□□ -1.64
NEK9-206ENST00000555537 CFC1BP0CG36 223 aa4.82□□□□□ -1.64
NEK9-206ENST00000555537 CFC1P0CG37 223 aa4.82□□□□□ -1.64
NEK9-206ENST00000555537 IFITM1P13164 125 aa4.82□□□□□ -1.64
NEK9-206ENST00000555537 LINC00304Q8N9R0 145 aa4.82□□□□□ -1.64
NEK9-206ENST00000555537 RPL28P46779 137 aaKnown RBP4.81□□□□□ -1.64
NEK9-206ENST00000555537 TMEM170BQ5T4T1 132 aa4.81□□□□□ -1.64
NEK9-206ENST00000555537 ANAPC13Q9BS18 74 aa4.81□□□□□ -1.64
NEK9-206ENST00000555537 TIMM21Q9BVV7 248 aa4.81□□□□□ -1.64
NEK9-206ENST00000555537 XAGE1AQ9HD64 81 aa4.81□□□□□ -1.64
NEK9-206ENST00000555537 TRBV10-2A0A0K0K1G8 114 aa4.8□□□□□ -1.64
NEK9-206ENST00000555537 TMEM223A0PJW6 202 aa4.8□□□□□ -1.64
NEK9-206ENST00000555537 RPL37AP8A6NKH3 93 aa4.8□□□□□ -1.64
NEK9-206ENST00000555537 BCE1O60756 84 aa4.8□□□□□ -1.64
NEK9-206ENST00000555537 TCL1BO95988 128 aa4.8□□□□□ -1.64
NEK9-206ENST00000555537 ANKRD29Q8N6D5 301 aa4.8□□□□□ -1.64
NEK9-206ENST00000555537 SMCPP49901 116 aaPredicted RBP4.79□□□□□ -1.64
NEK9-206ENST00000555537 IMUPQ9GZP8 106 aa4.79□□□□□ -1.64
NEK9-206ENST00000555537 C9JAW5 83 aa4.78□□□□□ -1.64
NEK9-206ENST00000555537 MRPS36P82909 103 aaKnown RBP4.78□□□□□ -1.64
NEK9-206ENST00000555537 Q1RN00 199 aa4.78□□□□□ -1.64
NEK9-206ENST00000555537 MRPL55Q7Z7F7 128 aaKnown RBP4.78□□□□□ -1.64
NEK9-206ENST00000555537 AMELXQ99217 191 aa4.78□□□□□ -1.64
NEK9-206ENST00000555537 TINCRA0A1B0GVN0 87 aa4.77□□□□□ -1.65
NEK9-206ENST00000555537 A4D1N5 150 aa4.77□□□□□ -1.65
NEK9-206ENST00000555537 ZNF22P17026 224 aaPredicted RBP4.77□□□□□ -1.65
NEK9-206ENST00000555537 ASB16-AS1Q495Z4 193 aa4.77□□□□□ -1.65
NEK9-206ENST00000555537 LINC00337Q8N6G1 96 aa4.77□□□□□ -1.65
NEK9-206ENST00000555537 LINC00167Q96N53 147 aa4.77□□□□□ -1.65
NEK9-206ENST00000555537 TOMM7Q9P0U1 55 aa4.77□□□□□ -1.65
NEK9-206ENST00000555537 IGLV4-3A0A075B6K6 122 aa4.75□□□□□ -1.65
NEK9-206ENST00000555537 MT-ATP8P03928 68 aa4.75□□□□□ -1.65
NEK9-206ENST00000555537 UBE2AP49459 152 aa4.75□□□□□ -1.65
NEK9-206ENST00000555537 NDUFV3P56181 108 aaKnown RBP4.75□□□□□ -1.65
NEK9-206ENST00000555537 FAM229BQ4G0N7 80 aa4.75□□□□□ -1.65
NEK9-206ENST00000555537 LCE2CQ5TA81 110 aa4.75□□□□□ -1.65
NEK9-206ENST00000555537 SFTA2Q6UW10 78 aa4.75□□□□□ -1.65
NEK9-206ENST00000555537 KRTAP13-1Q8IUC0 172 aa4.75□□□□□ -1.65
NEK9-206ENST00000555537 C3orf22Q8N5N4 141 aa4.75□□□□□ -1.65
NEK9-206ENST00000555537 TMEM126AQ9H061 195 aa4.75□□□□□ -1.65
NEK9-206ENST00000555537 IGLV5-45A0A087WSX0 123 aa4.74□□□□□ -1.65
NEK9-206ENST00000555537 TRBV7-7A0A0K0K1E9 115 aa4.74□□□□□ -1.65
NEK9-206ENST00000555537 LST1O00453 97 aa4.74□□□□□ -1.65
NEK9-206ENST00000555537 PRSS2P07478 247 aa4.74□□□□□ -1.65
NEK9-206ENST00000555537 TSPEAR-AS2P59090 65 aa4.74□□□□□ -1.65
NEK9-206ENST00000555537 HERV-K104P63124 156 aa4.74□□□□□ -1.65
NEK9-206ENST00000555537 KRTAP13-3Q3SY46 172 aa4.74□□□□□ -1.65
NEK9-206ENST00000555537 C6orf226Q5I0X4 101 aa4.74□□□□□ -1.65
NEK9-206ENST00000555537 MUSTN1Q8IVN3 82 aa4.74□□□□□ -1.65
NEK9-206ENST00000555537 NDUFA12Q9UI09 145 aa4.74□□□□□ -1.65
NEK9-206ENST00000555537 TRACP01848 142 aa4.73□□□□□ -1.65
NEK9-206ENST00000555537 HERVK_113P63121 156 aa4.73□□□□□ -1.65
NEK9-206ENST00000555537 FAM19A3Q7Z5A8 133 aa4.73□□□□□ -1.65
NEK9-206ENST00000555537 CXCL5P42830 114 aa4.72□□□□□ -1.65
NEK9-206ENST00000555537 SEC61BP60468 96 aaKnown RBP4.72□□□□□ -1.65
NEK9-206ENST00000555537 PRLHP81277 87 aa4.72□□□□□ -1.65
NEK9-206ENST00000555537 DAND5Q8N907 189 aa4.72□□□□□ -1.65
NEK9-206ENST00000555537 TRIAP1O43715 76 aa4.71□□□□□ -1.66
NEK9-206ENST00000555537 LINC00643Q86TS7 51 aa4.71□□□□□ -1.66
NEK9-206ENST00000555537 LINC01561Q8N1V8 128 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms