RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 SYS1-DBNDD2H3BUS1 97 aa6.74□□□□□ -1.33
TRAPPC6B-204ENST00000554018 HIST1H2BKO60814 126 aa6.74□□□□□ -1.33
TRAPPC6B-204ENST00000554018 HIST1H2BJP06899 126 aa6.74□□□□□ -1.33
TRAPPC6B-204ENST00000554018 HIST1H2BOP23527 126 aa6.74□□□□□ -1.33
TRAPPC6B-204ENST00000554018 HIST1H2BBP33778 126 aa6.74□□□□□ -1.33
TRAPPC6B-204ENST00000554018 HIST1H2BDP58876 126 aa6.74□□□□□ -1.33
TRAPPC6B-204ENST00000554018 HIST1H2BCP62807 126 aa6.74□□□□□ -1.33
TRAPPC6B-204ENST00000554018 MOBPQ13875 183 aa6.74□□□□□ -1.33
TRAPPC6B-204ENST00000554018 HIST2H2BEQ16778 126 aa6.74□□□□□ -1.33
TRAPPC6B-204ENST00000554018 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC6B-204ENST00000554018 HIST1H2BHQ93079 126 aa6.74□□□□□ -1.33
TRAPPC6B-204ENST00000554018 HIST1H2BNQ99877 126 aa6.74□□□□□ -1.33
TRAPPC6B-204ENST00000554018 HIST1H2BMQ99879 126 aa6.74□□□□□ -1.33
TRAPPC6B-204ENST00000554018 TRAV23DV6A0A075B6W5 121 aa6.73□□□□□ -1.33
TRAPPC6B-204ENST00000554018 A6NJY4 79 aa6.73□□□□□ -1.33
TRAPPC6B-204ENST00000554018 SPINK1P00995 79 aa6.73□□□□□ -1.33
TRAPPC6B-204ENST00000554018 FP248Q71RG6 208 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC6B-204ENST00000554018 ZNF73O43830 326 aaPredicted RBP6.71□□□□□ -1.34
TRAPPC6B-204ENST00000554018 SSBP3-AS1Q7Z2R9 100 aa6.71□□□□□ -1.34
TRAPPC6B-204ENST00000554018 LITAFQ99732 161 aa6.71□□□□□ -1.34
TRAPPC6B-204ENST00000554018 JOSD1Q15040 202 aaPredicted RBP6.7□□□□□ -1.34
TRAPPC6B-204ENST00000554018 KRTAP13-3Q3SY46 172 aa6.7□□□□□ -1.34
TRAPPC6B-204ENST00000554018 LINC01545Q5VT33 79 aa6.7□□□□□ -1.34
TRAPPC6B-204ENST00000554018 ST20-AS1Q8NBB2 130 aa6.7□□□□□ -1.34
TRAPPC6B-204ENST00000554018 LINC00308Q8TCZ7 52 aa6.7□□□□□ -1.34
TRAPPC6B-204ENST00000554018 PET117Q6UWS5 81 aa6.69□□□□□ -1.34
TRAPPC6B-204ENST00000554018 TIMM17BO60830 172 aa6.68□□□□□ -1.34
TRAPPC6B-204ENST00000554018 LCE2AQ5TA79 106 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC6B-204ENST00000554018 LCE2CQ5TA81 110 aa6.68□□□□□ -1.34
TRAPPC6B-204ENST00000554018 Q8N377 158 aa6.68□□□□□ -1.34
TRAPPC6B-204ENST00000554018 OR13C6PQ8NH95 151 aa6.68□□□□□ -1.34
TRAPPC6B-204ENST00000554018 TTTY13Q9BZ97 58 aa6.68□□□□□ -1.34
TRAPPC6B-204ENST00000554018 SPANXCQ9NY87 97 aa6.68□□□□□ -1.34
TRAPPC6B-204ENST00000554018 ZNF815PA8K554 130 aa6.67□□□□□ -1.34
TRAPPC6B-204ENST00000554018 C3orf79P0CE67 100 aa6.67□□□□□ -1.34
TRAPPC6B-204ENST00000554018 C9orf153Q5TBE3 101 aa6.67□□□□□ -1.34
TRAPPC6B-204ENST00000554018 HINT1P49773 126 aaPredicted RBP6.66□□□□□ -1.34
TRAPPC6B-204ENST00000554018 RPS29P62273 56 aaKnown RBP6.66□□□□□ -1.34
TRAPPC6B-204ENST00000554018 CBY1Q9Y3M2 126 aa6.66□□□□□ -1.34
TRAPPC6B-204ENST00000554018 SLC25A20O43772 301 aa6.65□□□□□ -1.34
TRAPPC6B-204ENST00000554018 KRTDAPP60985 99 aa6.65□□□□□ -1.34
TRAPPC6B-204ENST00000554018 C5orf52A6NGY3 159 aa6.63□□□□□ -1.35
TRAPPC6B-204ENST00000554018 COA6Q5JTJ3 125 aaKnown RBP6.63□□□□□ -1.35
TRAPPC6B-204ENST00000554018 SPANXDQ9BXN6 97 aa6.63□□□□□ -1.35
TRAPPC6B-204ENST00000554018 ASB16-AS1Q495Z4 193 aa6.62□□□□□ -1.35
TRAPPC6B-204ENST00000554018 DHRS4-AS1Q9P1J3 65 aa6.62□□□□□ -1.35
TRAPPC6B-204ENST00000554018 SPRR1BP22528 89 aa6.61□□□□□ -1.35
TRAPPC6B-204ENST00000554018 COX7BP24311 80 aa6.61□□□□□ -1.35
TRAPPC6B-204ENST00000554018 C6orf99Q4VX62 202 aa6.61□□□□□ -1.35
TRAPPC6B-204ENST00000554018 ANKRD39Q53RE8 183 aa6.61□□□□□ -1.35
TRAPPC6B-204ENST00000554018 LINC00518Q8N0U6 118 aa6.61□□□□□ -1.35
TRAPPC6B-204ENST00000554018 ELOF1P60002 83 aaKnown RBP6.6□□□□□ -1.35
TRAPPC6B-204ENST00000554018 SCGB1D4Q6XE38 83 aa6.6□□□□□ -1.35
TRAPPC6B-204ENST00000554018 KRTAP4-1Q9BYQ7 146 aa6.6□□□□□ -1.35
TRAPPC6B-204ENST00000554018 SEC61BP60468 96 aaKnown RBP6.59□□□□□ -1.35
TRAPPC6B-204ENST00000554018 HRCT1Q6UXD1 115 aa6.59□□□□□ -1.35
TRAPPC6B-204ENST00000554018 ATOH7Q8N100 152 aa6.59□□□□□ -1.35
TRAPPC6B-204ENST00000554018 C20orf202A1L168 122 aa6.58□□□□□ -1.36
TRAPPC6B-204ENST00000554018 SLC25A34Q6PIV7 304 aa6.58□□□□□ -1.36
TRAPPC6B-204ENST00000554018 DEFB105AQ8NG35 78 aa6.58□□□□□ -1.36
TRAPPC6B-204ENST00000554018 KRTAP9-2Q9BYQ4 174 aa6.58□□□□□ -1.36
TRAPPC6B-204ENST00000554018 LAMTOR3Q9UHA4 124 aa6.58□□□□□ -1.36
TRAPPC6B-204ENST00000554018 TAL2Q16559 108 aa6.57□□□□□ -1.36
TRAPPC6B-204ENST00000554018 PCP2Q8IVA1 136 aa6.57□□□□□ -1.36
TRAPPC6B-204ENST00000554018 IFITM1P13164 125 aa6.56□□□□□ -1.36
TRAPPC6B-204ENST00000554018 Q1RN00 199 aa6.56□□□□□ -1.36
TRAPPC6B-204ENST00000554018 XP32Q5T750 250 aa6.56□□□□□ -1.36
TRAPPC6B-204ENST00000554018 MUSTN1Q8IVN3 82 aa6.56□□□□□ -1.36
TRAPPC6B-204ENST00000554018 COPS9Q8WXC6 57 aa6.56□□□□□ -1.36
TRAPPC6B-204ENST00000554018 TRBV7-6A0A0J9YX20 115 aa6.55□□□□□ -1.36
TRAPPC6B-204ENST00000554018 A6NDN8 102 aa6.55□□□□□ -1.36
TRAPPC6B-204ENST00000554018 TEX49A0A1B0GTD5 131 aa6.54□□□□□ -1.36
TRAPPC6B-204ENST00000554018 Q6ZVH6 145 aa6.54□□□□□ -1.36
TRAPPC6B-204ENST00000554018 LIMD2Q9BT23 127 aa6.54□□□□□ -1.36
TRAPPC6B-204ENST00000554018 A0A1B0GWB2 263 aa6.53□□□□□ -1.36
TRAPPC6B-204ENST00000554018 SMIM29Q86T20 159 aa6.53□□□□□ -1.36
TRAPPC6B-204ENST00000554018 LINC01547P58512 204 aaPredicted RBP6.52□□□□□ -1.37
TRAPPC6B-204ENST00000554018 PRO1933Q9H354 126 aa6.52□□□□□ -1.37
TRAPPC6B-204ENST00000554018 H7C2G1 150 aa6.51□□□□□ -1.37
TRAPPC6B-204ENST00000554018 LORP23490 312 aaPredicted RBP6.51□□□□□ -1.37
TRAPPC6B-204ENST00000554018 AKR1D1P51857 326 aa6.51□□□□□ -1.37
TRAPPC6B-204ENST00000554018 CD164Q04900 197 aa6.51□□□□□ -1.37
TRAPPC6B-204ENST00000554018 IGLV5-48A0A075B6I7 105 aa6.5□□□□□ -1.37
TRAPPC6B-204ENST00000554018 A0A0G2JQZ4 141 aa6.5□□□□□ -1.37
TRAPPC6B-204ENST00000554018 C9orf92A6NGG3 77 aa6.5□□□□□ -1.37
TRAPPC6B-204ENST00000554018 SMIM11BQ8TCY0 68 aa6.5□□□□□ -1.37
TRAPPC6B-204ENST00000554018 TRAV13-2A0A0B4J235 113 aa6.49□□□□□ -1.37
TRAPPC6B-204ENST00000554018 SNRPEP62304 92 aaKnown RBP6.49□□□□□ -1.37
TRAPPC6B-204ENST00000554018 A4D1N5 150 aa6.48□□□□□ -1.37
TRAPPC6B-204ENST00000554018 HIST3H2BBQ8N257 126 aa6.48□□□□□ -1.37
TRAPPC6B-204ENST00000554018 HIST1H2BLQ99880 126 aa6.48□□□□□ -1.37
TRAPPC6B-204ENST00000554018 PCOTHQ58A44 107 aa6.47□□□□□ -1.37
TRAPPC6B-204ENST00000554018 S100A2P29034 98 aa6.46□□□□□ -1.38
TRAPPC6B-204ENST00000554018 C1orf195Q5TG92 126 aa6.46□□□□□ -1.38
TRAPPC6B-204ENST00000554018 NHP2Q9NX24 153 aaKnown RBP6.46□□□□□ -1.38
TRAPPC6B-204ENST00000554018 Q5XG85 94 aa6.45□□□□□ -1.38
TRAPPC6B-204ENST00000554018 HSBP1L1C9JCN9 74 aa6.44□□□□□ -1.38
TRAPPC6B-204ENST00000554018 VAMP3Q15836 100 aa6.44□□□□□ -1.38
TRAPPC6B-204ENST00000554018 LINC00575Q6W349 94 aa6.43□□□□□ -1.38
TRAPPC6B-204ENST00000554018 IGLV8-61A0A075B6I0 122 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms