RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 NISCHQ9Y2I1 1504 aa29.51■■■□□ 2.32
TRAPPC6B-204ENST00000554018 CCDC180Q9P1Z9 1646 aa26.41■■□□□ 1.82
TRAPPC6B-204ENST00000554018 ABCC9O60706 1549 aa26.22■■□□□ 1.79
TRAPPC6B-204ENST00000554018 RB1CC1Q8TDY2 1594 aa25.02■■□□□ 1.6
TRAPPC6B-204ENST00000554018 NACADO15069 1562 aa24.89■■□□□ 1.58
TRAPPC6B-204ENST00000554018 DCAF8L2P0C7V8 631 aa24.86■■□□□ 1.57
TRAPPC6B-204ENST00000554018 MYO15BQ96JP2 1530 aa24.59■■□□□ 1.53
TRAPPC6B-204ENST00000554018 UNC13AQ9UPW8 1703 aa24.56■■□□□ 1.52
TRAPPC6B-204ENST00000554018 ZCCHC6Q5VYS8 1495 aaKnown RBP24.49■■□□□ 1.51
TRAPPC6B-204ENST00000554018 PABPN1Q86U42 306 aaKnown RBP eCLIP24.45■■□□□ 1.5
TRAPPC6B-204ENST00000554018 DNAJC5BQ9UF47 199 aa24.43■■□□□ 1.5
TRAPPC6B-204ENST00000554018 DCAF1Q9Y4B6 1507 aa24.36■■□□□ 1.49
TRAPPC6B-204ENST00000554018 BICRAQ9NZM4 1560 aa24.32■■□□□ 1.48
TRAPPC6B-204ENST00000554018 SCRIBQ14160 1630 aa24.1■■□□□ 1.45
TRAPPC6B-204ENST00000554018 SHROOM4Q9ULL8 1493 aa23.93■■□□□ 1.42
TRAPPC6B-204ENST00000554018 CC2D2AQ9P2K1 1620 aa23.7■■□□□ 1.39
TRAPPC6B-204ENST00000554018 EIF4G1Q04637 1599 aaKnown RBP23.68■■□□□ 1.38
TRAPPC6B-204ENST00000554018 CECR2Q9BXF3 1484 aa23.58■■□□□ 1.37
TRAPPC6B-204ENST00000554018 SMARCA4P51532 1647 aa23■■□□□ 1.27
TRAPPC6B-204ENST00000554018 NCAPD3P42695 1498 aa22.97■■□□□ 1.27
TRAPPC6B-204ENST00000554018 ATAD2BQ9ULI0 1458 aa22.94■■□□□ 1.26
TRAPPC6B-204ENST00000554018 SMARCA2P51531 1590 aa22.89■■□□□ 1.25
TRAPPC6B-204ENST00000554018 BAZ1AQ9NRL2 1556 aaPredicted RBP22.89■■□□□ 1.25
TRAPPC6B-204ENST00000554018 HMGXB3Q12766 1538 aa22.82■■□□□ 1.24
TRAPPC6B-204ENST00000554018 MROH2BQ7Z745 1585 aa22.76■■□□□ 1.23
TRAPPC6B-204ENST00000554018 PEG3Q9GZU2 1588 aa22.74■■□□□ 1.23
TRAPPC6B-204ENST00000554018 BAZ1BQ9UIG0 1483 aaKnown RBP22.73■■□□□ 1.23
TRAPPC6B-204ENST00000554018 ERCC6Q03468 1493 aa22.6■■□□□ 1.21
TRAPPC6B-204ENST00000554018 NESP48681 1621 aa22.59■■□□□ 1.21
TRAPPC6B-204ENST00000554018 WIZO95785 1651 aa22.53■■□□□ 1.2
TRAPPC6B-204ENST00000554018 CUX2O14529 1486 aa22.47■■□□□ 1.19
TRAPPC6B-204ENST00000554018 LAMC3Q9Y6N6 1575 aa22.43■■□□□ 1.18
TRAPPC6B-204ENST00000554018 RSF1Q96T23 1441 aaPredicted RBP22.34■■□□□ 1.17
TRAPPC6B-204ENST00000554018 KIF21AQ7Z4S6 1674 aa22.34■■□□□ 1.17
TRAPPC6B-204ENST00000554018 THOC2Q8NI27 1593 aaKnown RBP22.31■■□□□ 1.16
TRAPPC6B-204ENST00000554018 CADPSQ9ULU8 1353 aa22.28■■□□□ 1.16
TRAPPC6B-204ENST00000554018 PDS5BQ9NTI5 1447 aa22.28■■□□□ 1.16
TRAPPC6B-204ENST00000554018 DNAJC5Q9H3Z4 198 aa22.25■■□□□ 1.15
TRAPPC6B-204ENST00000554018 TOP2AP11388 1531 aaKnown RBP22.21■■□□□ 1.15
TRAPPC6B-204ENST00000554018 MRC2Q9UBG0 1479 aa22.09■■□□□ 1.13
TRAPPC6B-204ENST00000554018 CFTRP13569 1480 aa22.08■■□□□ 1.12
TRAPPC6B-204ENST00000554018 FANCD2Q9BXW9 1451 aa22.04■■□□□ 1.12
TRAPPC6B-204ENST00000554018 CEP164Q9UPV0 1460 aa22.04■■□□□ 1.12
TRAPPC6B-204ENST00000554018 WDR62O43379 1518 aa22.03■■□□□ 1.12
TRAPPC6B-204ENST00000554018 CCDC88BA6NC98 1476 aa21.97■■□□□ 1.11
TRAPPC6B-204ENST00000554018 PRDM2Q13029 1718 aa21.95■■□□□ 1.1
TRAPPC6B-204ENST00000554018 URB2Q14146 1524 aaKnown RBP21.86■■□□□ 1.09
TRAPPC6B-204ENST00000554018 TOPBP1Q92547 1522 aa21.65■■□□□ 1.06
TRAPPC6B-204ENST00000554018 ABCC8Q09428 1581 aa21.6■■□□□ 1.05
TRAPPC6B-204ENST00000554018 DNMBPQ6XZF7 1577 aa21.6■■□□□ 1.05
TRAPPC6B-204ENST00000554018 IFT140Q96RY7 1462 aa21.58■■□□□ 1.05
TRAPPC6B-204ENST00000554018 ZNF608Q9ULD9 1512 aaPredicted RBP21.57■■□□□ 1.04
TRAPPC6B-204ENST00000554018 SUPT5HO00267 1087 aaKnown RBP21.55■■□□□ 1.04
TRAPPC6B-204ENST00000554018 OSCARQ8IYS5 282 aa21.5■■□□□ 1.03
TRAPPC6B-204ENST00000554018 TARBP1Q13395 1621 aaKnown RBP21.47■■□□□ 1.03
TRAPPC6B-204ENST00000554018 EIF4G3O43432 1585 aaKnown RBP21.46■■□□□ 1.03
TRAPPC6B-204ENST00000554018 POLA1P09884 1462 aaPredicted RBP21.45■■□□□ 1.02
TRAPPC6B-204ENST00000554018 AQRO60306 1485 aaKnown RBP eCLIP21.4■■□□□ 1.02
TRAPPC6B-204ENST00000554018 RAD54L2Q9Y4B4 1467 aa21.39■■□□□ 1.01
TRAPPC6B-204ENST00000554018 TRIM41Q8WV44 630 aa21.38■■□□□ 1.01
TRAPPC6B-204ENST00000554018 CUX1P39880 1505 aa21.37■■□□□ 1.01
TRAPPC6B-204ENST00000554018 SOGA1O94964 1423 aa21.35■■□□□ 1.01
TRAPPC6B-204ENST00000554018 FGD5Q6ZNL6 1462 aa21.34■■□□□ 1.01
TRAPPC6B-204ENST00000554018 CHD1O14646 1710 aa21.31■■□□□ 1
TRAPPC6B-204ENST00000554018 TDRD9Q8NDG6 1382 aaKnown RBP21.29■■□□□ 1
TRAPPC6B-204ENST00000554018 RIMBP3CA6NJZ7 1639 aa21.23■□□□□ 0.99
TRAPPC6B-204ENST00000554018 RIMBP3BA6NNM3 1639 aa21.23■□□□□ 0.99
TRAPPC6B-204ENST00000554018 RIMBP3Q9UFD9 1639 aa21.23■□□□□ 0.99
TRAPPC6B-204ENST00000554018 WDR97A6NE52 1622 aa21.22■□□□□ 0.99
TRAPPC6B-204ENST00000554018 FBLN2P98095 1184 aa21.22■□□□□ 0.99
TRAPPC6B-204ENST00000554018 SNAPC4Q5SXM2 1469 aa21.17■□□□□ 0.98
TRAPPC6B-204ENST00000554018 ARHGEF11O15085 1522 aa21.15■□□□□ 0.98
TRAPPC6B-204ENST00000554018 GRIN2BQ13224 1484 aa21.13■□□□□ 0.97
TRAPPC6B-204ENST00000554018 PBRM1Q86U86 1689 aa21.12■□□□□ 0.97
TRAPPC6B-204ENST00000554018 MAGI1Q96QZ7 1491 aaPredicted RBP21.11■□□□□ 0.97
TRAPPC6B-204ENST00000554018 ABCA10Q8WWZ4 1543 aa21.1■□□□□ 0.97
TRAPPC6B-204ENST00000554018 GAPVD1Q14C86 1478 aa21.1■□□□□ 0.97
TRAPPC6B-204ENST00000554018 BIVM-ERCC5R4GMW8 1640 aa21.09■□□□□ 0.97
TRAPPC6B-204ENST00000554018 TOP2BQ02880 1626 aa21.08■□□□□ 0.97
TRAPPC6B-204ENST00000554018 SYNJ1O43426 1573 aa21.08■□□□□ 0.97
TRAPPC6B-204ENST00000554018 CHMP7Q8WUX9 453 aaPredicted RBP21.08■□□□□ 0.97
TRAPPC6B-204ENST00000554018 ABCA5Q8WWZ7 1642 aa21.07■□□□□ 0.96
TRAPPC6B-204ENST00000554018 WRNQ14191 1432 aaPredicted RBP eCLIP21.06■□□□□ 0.96
TRAPPC6B-204ENST00000554018 SYNJ2O15056 1496 aa21.04■□□□□ 0.96
TRAPPC6B-204ENST00000554018 CLASP1Q7Z460 1538 aa21.01■□□□□ 0.95
TRAPPC6B-204ENST00000554018 CYB5RLQ6IPT4 315 aa21■□□□□ 0.95
TRAPPC6B-204ENST00000554018 ARAP1Q96P48 1450 aa20.96■□□□□ 0.95
TRAPPC6B-204ENST00000554018 ADAMTS12P58397 1594 aa20.89■□□□□ 0.94
TRAPPC6B-204ENST00000554018 GRIN2AQ12879 1464 aa20.87■□□□□ 0.93
TRAPPC6B-204ENST00000554018 ERICH3Q5RHP9 1530 aa20.83■□□□□ 0.93
TRAPPC6B-204ENST00000554018 FHAD1B1AJZ9 1412 aa20.82■□□□□ 0.92
TRAPPC6B-204ENST00000554018 CEP170Q5SW79 1584 aa20.8■□□□□ 0.92
TRAPPC6B-204ENST00000554018 NUP160Q12769 1436 aa20.78■□□□□ 0.92
TRAPPC6B-204ENST00000554018 ERCC6L2Q5T890 1561 aa20.74■□□□□ 0.91
TRAPPC6B-204ENST00000554018 TRHP20396 242 aaPredicted RBP20.7■□□□□ 0.9
TRAPPC6B-204ENST00000554018 SHROOM2Q13796 1616 aa20.7■□□□□ 0.9
TRAPPC6B-204ENST00000554018 KIF27Q86VH2 1401 aa20.65■□□□□ 0.9
TRAPPC6B-204ENST00000554018 IGF1RP08069 1367 aa20.63■□□□□ 0.89
TRAPPC6B-204ENST00000554018 CUL7Q14999 1698 aa20.6■□□□□ 0.89
TRAPPC6B-204ENST00000554018 RUSC2Q8N2Y8 1516 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms