RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 PLA2G2DQ9UNK4 145 aa12□□□□□ -0.49
PRPF40B-208ENST00000548436 UBL5Q9BZL1 73 aa11.98□□□□□ -0.49
PRPF40B-208ENST00000548436 GHRHP01286 108 aa11.98□□□□□ -0.49
PRPF40B-208ENST00000548436 TRBV7-4A0A0J9YYF1 115 aa11.97□□□□□ -0.49
PRPF40B-208ENST00000548436 KRTAP7-1Q8IUC3 87 aa11.97□□□□□ -0.49
PRPF40B-208ENST00000548436 DNAH9Q9NYC9 4486 aa11.97□□□□□ -0.49
PRPF40B-208ENST00000548436 PDE6GP18545 87 aa11.96□□□□□ -0.49
PRPF40B-208ENST00000548436 RPL37AP8A6NKH3 93 aa11.96□□□□□ -0.5
PRPF40B-208ENST00000548436 ATP5EP2Q5VTU8 51 aa11.96□□□□□ -0.5
PRPF40B-208ENST00000548436 KRTAP1-5Q9BYS1 174 aa11.96□□□□□ -0.5
PRPF40B-208ENST00000548436 IGLV5-37A0A075B6J1 123 aa11.95□□□□□ -0.5
PRPF40B-208ENST00000548436 STAB2Q8WWQ8 2551 aa11.95□□□□□ -0.5
PRPF40B-208ENST00000548436 SS18L2Q9UHA2 77 aa11.94□□□□□ -0.5
PRPF40B-208ENST00000548436 ATOX1O00244 68 aa11.93□□□□□ -0.5
PRPF40B-208ENST00000548436 DNAH10Q8IVF4 4471 aa11.93□□□□□ -0.5
PRPF40B-208ENST00000548436 IGLV1-50A0A075B6I6 118 aa11.93□□□□□ -0.5
PRPF40B-208ENST00000548436 KRTAP4-16G5E9R7 235 aaPredicted RBP11.91□□□□□ -0.5
PRPF40B-208ENST00000548436 FAM19A1Q7Z5A9 133 aa11.91□□□□□ -0.5
PRPF40B-208ENST00000548436 C3orf22Q8N5N4 141 aa11.91□□□□□ -0.5
PRPF40B-208ENST00000548436 Q6ZVQ6 151 aa11.91□□□□□ -0.5
PRPF40B-208ENST00000548436 LOC107984640A0A0U1RRK4 108 aa11.9□□□□□ -0.5
PRPF40B-208ENST00000548436 PRYO14603 147 aa11.9□□□□□ -0.51
PRPF40B-208ENST00000548436 UQCRQO14949 82 aa11.9□□□□□ -0.51
PRPF40B-208ENST00000548436 FAM19A5Q7Z5A7 132 aaPredicted RBP11.9□□□□□ -0.51
PRPF40B-208ENST00000548436 SPRR1AP35321 89 aa11.89□□□□□ -0.51
PRPF40B-208ENST00000548436 Q6ZRX8 168 aa11.89□□□□□ -0.51
PRPF40B-208ENST00000548436 APLNQ9ULZ1 77 aa11.89□□□□□ -0.51
PRPF40B-208ENST00000548436 COX7CP15954 63 aa11.88□□□□□ -0.51
PRPF40B-208ENST00000548436 Q9BRP9 147 aa11.88□□□□□ -0.51
PRPF40B-208ENST00000548436 Q8N377 158 aa11.88□□□□□ -0.51
PRPF40B-208ENST00000548436 DEFB105AQ8NG35 78 aa11.88□□□□□ -0.51
PRPF40B-208ENST00000548436 LINC01547P58512 204 aaPredicted RBP11.87□□□□□ -0.51
PRPF40B-208ENST00000548436 MRPL55Q7Z7F7 128 aaKnown RBP11.87□□□□□ -0.51
PRPF40B-208ENST00000548436 DYNC2H1Q8NCM8 4307 aaKnown RBP11.86□□□□□ -0.51
PRPF40B-208ENST00000548436 CSMD3Q7Z407 3707 aa11.86□□□□□ -0.51
PRPF40B-208ENST00000548436 DNAH7Q8WXX0 4024 aa11.85□□□□□ -0.51
PRPF40B-208ENST00000548436 HAMPP81172 84 aa11.85□□□□□ -0.51
PRPF40B-208ENST00000548436 C9orf153Q5TBE3 101 aa11.85□□□□□ -0.51
PRPF40B-208ENST00000548436 UBE2DNLQ8IWF7 75 aa11.85□□□□□ -0.51
PRPF40B-208ENST00000548436 DHRS4-AS1Q9P1J3 65 aa11.85□□□□□ -0.51
PRPF40B-208ENST00000548436 ETDCA0A1B0GVM5 59 aa11.85□□□□□ -0.51
PRPF40B-208ENST00000548436 B9D2Q9BPU9 175 aa11.84□□□□□ -0.51
PRPF40B-208ENST00000548436 PSCAO43653 123 aa11.82□□□□□ -0.52
PRPF40B-208ENST00000548436 A0A096LNI7 61 aa11.81□□□□□ -0.52
PRPF40B-208ENST00000548436 CNBPP62633 177 aaKnown RBP11.8□□□□□ -0.52
PRPF40B-208ENST00000548436 SERP2Q8N6R1 65 aa11.8□□□□□ -0.52
PRPF40B-208ENST00000548436 ST20-AS1Q8NBB2 130 aa11.8□□□□□ -0.52
PRPF40B-208ENST00000548436 CXCL6P80162 114 aa11.79□□□□□ -0.52
PRPF40B-208ENST00000548436 IGLV5-48A0A075B6I7 105 aa11.79□□□□□ -0.52
PRPF40B-208ENST00000548436 ERC2-IT1O76042 136 aa11.79□□□□□ -0.52
PRPF40B-208ENST00000548436 TENM2Q9NT68 2774 aa11.78□□□□□ -0.52
PRPF40B-208ENST00000548436 IGKV2-24A0A0C4DH68 120 aa11.78□□□□□ -0.52
PRPF40B-208ENST00000548436 C16orf90A8MZG2 172 aa11.78□□□□□ -0.52
PRPF40B-208ENST00000548436 CRYGAP11844 174 aa11.77□□□□□ -0.52
PRPF40B-208ENST00000548436 REG3GQ6UW15 175 aa11.77□□□□□ -0.52
PRPF40B-208ENST00000548436 A0A1W2PNN7 141 aa11.77□□□□□ -0.53
PRPF40B-208ENST00000548436 SCXQ7RTU7 201 aa11.77□□□□□ -0.53
PRPF40B-208ENST00000548436 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.76□□□□□ -0.53
PRPF40B-208ENST00000548436 UBE2BP63146 152 aa11.75□□□□□ -0.53
PRPF40B-208ENST00000548436 PLECQ15149 4684 aaKnown RBP11.75□□□□□ -0.53
PRPF40B-208ENST00000548436 CYSTM1Q9H1C7 97 aa11.74□□□□□ -0.53
PRPF40B-208ENST00000548436 TNP2Q05952 138 aa11.73□□□□□ -0.53
PRPF40B-208ENST00000548436 C3orf84H3BNL1 204 aa11.72□□□□□ -0.53
PRPF40B-208ENST00000548436 C14orf177Q52M58 125 aa11.71□□□□□ -0.54
PRPF40B-208ENST00000548436 CHTF8P0CG12 524 aa11.69□□□□□ -0.54
PRPF40B-208ENST00000548436 A0A1W2PNM2 257 aa11.69□□□□□ -0.54
PRPF40B-208ENST00000548436 NBDYA0A0U1RRE5 68 aa11.68□□□□□ -0.54
PRPF40B-208ENST00000548436 LRCOL1A6NCL2 159 aa11.68□□□□□ -0.54
PRPF40B-208ENST00000548436 NUPR2A6NF83 97 aa11.68□□□□□ -0.54
PRPF40B-208ENST00000548436 NREPQ16612 68 aa11.68□□□□□ -0.54
PRPF40B-208ENST00000548436 C1orf137Q5JT78 98 aa11.68□□□□□ -0.54
PRPF40B-208ENST00000548436 PRLHP81277 87 aa11.66□□□□□ -0.54
PRPF40B-208ENST00000548436 SMIM29Q86T20 159 aa11.66□□□□□ -0.54
PRPF40B-208ENST00000548436 KRTAP11-1Q8IUC1 163 aa11.65□□□□□ -0.54
PRPF40B-208ENST00000548436 FUSP35637 526 aaKnown RBP eCLIP11.64□□□□□ -0.55
PRPF40B-208ENST00000548436 Q6ZRN7 208 aaPredicted RBP11.64□□□□□ -0.55
PRPF40B-208ENST00000548436 Q8N9L7 120 aa11.64□□□□□ -0.55
PRPF40B-208ENST00000548436 BCE1O60756 84 aa11.64□□□□□ -0.55
PRPF40B-208ENST00000548436 PHF5AQ7RTV0 110 aaKnown RBP11.64□□□□□ -0.55
PRPF40B-208ENST00000548436 C9orf163Q8N9P6 203 aa11.64□□□□□ -0.55
PRPF40B-208ENST00000548436 MEGF8Q7Z7M0 2845 aa11.63□□□□□ -0.55
PRPF40B-208ENST00000548436 PRKDCP78527 4128 aaKnown RBP11.63□□□□□ -0.55
PRPF40B-208ENST00000548436 Q8NBF4 154 aa11.63□□□□□ -0.55
PRPF40B-208ENST00000548436 STARD9Q9P2P6 4700 aa11.62□□□□□ -0.55
PRPF40B-208ENST00000548436 IGKV4-1P06312 121 aa11.61□□□□□ -0.55
PRPF40B-208ENST00000548436 TRAV7A0A075B6U4 112 aa11.61□□□□□ -0.55
PRPF40B-208ENST00000548436 A0A1B0GW54 56 aa11.61□□□□□ -0.55
PRPF40B-208ENST00000548436 BPY2O14599 106 aa11.6□□□□□ -0.55
PRPF40B-208ENST00000548436 SPRR4Q96PI1 79 aa11.6□□□□□ -0.55
PRPF40B-208ENST00000548436 SMIM20Q8N5G0 67 aa11.59□□□□□ -0.55
PRPF40B-208ENST00000548436 HIGD2AQ9BW72 106 aa11.59□□□□□ -0.55
PRPF40B-208ENST00000548436 LINC00476Q8WZB0 136 aa11.58□□□□□ -0.56
PRPF40B-208ENST00000548436 VPS13DQ5THJ4 4388 aa11.58□□□□□ -0.56
PRPF40B-208ENST00000548436 C20orf197Q8N268 126 aa11.57□□□□□ -0.56
PRPF40B-208ENST00000548436 A0A0G2JQZ4 141 aa11.56□□□□□ -0.56
PRPF40B-208ENST00000548436 PANO1I0J062 215 aa11.56□□□□□ -0.56
PRPF40B-208ENST00000548436 F8WEM9 126 aa11.55□□□□□ -0.56
PRPF40B-208ENST00000548436 EPM2AB3EWF7 344 aa11.54□□□□□ -0.56
PRPF40B-208ENST00000548436 IGFL1Q6UW32 110 aa11.53□□□□□ -0.56
PRPF40B-208ENST00000548436 TMEM258P61165 79 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms