RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 C15orf56Q8N910 161 aa8.09□□□□□ -1.12
NPC1L1-204ENST00000546276 SPINK1P00995 79 aa8.08□□□□□ -1.12
NPC1L1-204ENST00000546276 A8MWP4 228 aa8.08□□□□□ -1.12
NPC1L1-204ENST00000546276 UNC80Q8N2C7 3258 aa8.08□□□□□ -1.12
NPC1L1-204ENST00000546276 ACYP2P14621 99 aa8.08□□□□□ -1.12
NPC1L1-204ENST00000546276 C1orf134Q5TEV5 83 aa8.06□□□□□ -1.12
NPC1L1-204ENST00000546276 A8MUN3 132 aa8.06□□□□□ -1.12
NPC1L1-204ENST00000546276 A0A1B0GU69 56 aa8.06□□□□□ -1.12
NPC1L1-204ENST00000546276 ZNF292O60281 2723 aa8.06□□□□□ -1.12
NPC1L1-204ENST00000546276 IGFL1Q6UW32 110 aa8.05□□□□□ -1.12
NPC1L1-204ENST00000546276 IGKV2D-30A0A075B6S6 120 aa8.04□□□□□ -1.12
NPC1L1-204ENST00000546276 IGKV2-30P06310 120 aa8.04□□□□□ -1.12
NPC1L1-204ENST00000546276 MDFIQ99750 246 aa8.04□□□□□ -1.12
NPC1L1-204ENST00000546276 CHTF8P0CG12 524 aa8.03□□□□□ -1.12
NPC1L1-204ENST00000546276 COA5Q86WW8 74 aa8.02□□□□□ -1.13
NPC1L1-204ENST00000546276 CYP4F30PQ9H0H9 118 aa8.01□□□□□ -1.13
NPC1L1-204ENST00000546276 PRR15Q8IV56 129 aa8.01□□□□□ -1.13
NPC1L1-204ENST00000546276 PLA2G2DQ9UNK4 145 aa8□□□□□ -1.13
NPC1L1-204ENST00000546276 TLX1NBP0CAT3 122 aa8□□□□□ -1.13
NPC1L1-204ENST00000546276 C7orf65Q6ZTY9 151 aa8□□□□□ -1.13
NPC1L1-204ENST00000546276 LOC101927531A0A1B0GV80 90 aa7.99□□□□□ -1.13
NPC1L1-204ENST00000546276 KRTAP24-1Q3LI83 254 aa7.99□□□□□ -1.13
NPC1L1-204ENST00000546276 A0A1W2PNM2 257 aa7.99□□□□□ -1.13
NPC1L1-204ENST00000546276 HELZ2Q9BYK8 2649 aaKnown RBP7.98□□□□□ -1.13
NPC1L1-204ENST00000546276 CDH23Q9H251 3354 aa7.98□□□□□ -1.13
NPC1L1-204ENST00000546276 NBDYA0A0U1RRE5 68 aa7.98□□□□□ -1.13
NPC1L1-204ENST00000546276 KRTAP10-3P60369 221 aa7.98□□□□□ -1.13
NPC1L1-204ENST00000546276 MRPL34Q9BQ48 92 aaKnown RBP7.97□□□□□ -1.13
NPC1L1-204ENST00000546276 A0A0G2JQZ4 141 aa7.96□□□□□ -1.14
NPC1L1-204ENST00000546276 A0A1W2PNN7 141 aa7.96□□□□□ -1.14
NPC1L1-204ENST00000546276 IGLV5-48A0A075B6I7 105 aa7.95□□□□□ -1.14
NPC1L1-204ENST00000546276 LINC00313P59037 77 aa7.95□□□□□ -1.14
NPC1L1-204ENST00000546276 SPACA4Q8TDM5 124 aa7.95□□□□□ -1.14
NPC1L1-204ENST00000546276 RTL8CO15255 209 aa7.94□□□□□ -1.14
NPC1L1-204ENST00000546276 OCR1Q9BZK8 76 aa7.93□□□□□ -1.14
NPC1L1-204ENST00000546276 C8orf17Q9NRJ1 99 aa7.93□□□□□ -1.14
NPC1L1-204ENST00000546276 ATP11AUNQ6ZP68 121 aa7.92□□□□□ -1.14
NPC1L1-204ENST00000546276 KRTAP10-11P60412 298 aa7.92□□□□□ -1.14
NPC1L1-204ENST00000546276 CENPEQ02224 2701 aa7.91□□□□□ -1.14
NPC1L1-204ENST00000546276 C8orf87E5RJ46 101 aa7.91□□□□□ -1.14
NPC1L1-204ENST00000546276 KRTAP1-3Q8IUG1 177 aa7.91□□□□□ -1.14
NPC1L1-204ENST00000546276 PRUNE2Q8WUY3 3088 aa7.91□□□□□ -1.14
NPC1L1-204ENST00000546276 WIPF1O43516 503 aa7.91□□□□□ -1.14
NPC1L1-204ENST00000546276 FAM229AH3BQW9 127 aa7.9□□□□□ -1.14
NPC1L1-204ENST00000546276 CYSTM1Q9H1C7 97 aa7.89□□□□□ -1.15
NPC1L1-204ENST00000546276 USP24Q9UPU5 2620 aa7.88□□□□□ -1.15
NPC1L1-204ENST00000546276 SPANXA2-OT1Q8N9U9 137 aa7.88□□□□□ -1.15
NPC1L1-204ENST00000546276 A0A1B0GVX0 72 aa7.88□□□□□ -1.15
NPC1L1-204ENST00000546276 VCANP13611 3396 aa7.88□□□□□ -1.15
NPC1L1-204ENST00000546276 CFAP46Q8IYW2 2715 aa7.88□□□□□ -1.15
NPC1L1-204ENST00000546276 IGLV5-37A0A075B6J1 123 aa7.87□□□□□ -1.15
NPC1L1-204ENST00000546276 CASC10Q5T4H9 136 aa7.86□□□□□ -1.15
NPC1L1-204ENST00000546276 FLNAP21333 2647 aaKnown RBP7.85□□□□□ -1.15
NPC1L1-204ENST00000546276 Q5XG85 94 aa7.85□□□□□ -1.15
NPC1L1-204ENST00000546276 KRTAP1-1Q07627 177 aa7.84□□□□□ -1.15
NPC1L1-204ENST00000546276 Q8NDZ9 215 aa7.84□□□□□ -1.15
NPC1L1-204ENST00000546276 TRIOO75962 3097 aa7.84□□□□□ -1.16
NPC1L1-204ENST00000546276 IGLV8-61A0A075B6I0 122 aa7.83□□□□□ -1.16
NPC1L1-204ENST00000546276 DSCR10P59022 87 aa7.83□□□□□ -1.16
NPC1L1-204ENST00000546276 C9orf163Q8N9P6 203 aa7.83□□□□□ -1.16
NPC1L1-204ENST00000546276 SPRR4Q96PI1 79 aa7.83□□□□□ -1.16
NPC1L1-204ENST00000546276 WDFY4Q6ZS81 3184 aa7.83□□□□□ -1.16
NPC1L1-204ENST00000546276 CD164Q04900 197 aa7.83□□□□□ -1.16
NPC1L1-204ENST00000546276 Q1T7F1 81 aa7.82□□□□□ -1.16
NPC1L1-204ENST00000546276 UQCR11O14957 56 aa7.81□□□□□ -1.16
NPC1L1-204ENST00000546276 SZT2Q5T011 3432 aa7.81□□□□□ -1.16
NPC1L1-204ENST00000546276 ITPR3Q14573 2671 aa7.81□□□□□ -1.16
NPC1L1-204ENST00000546276 K7EIL1 84 aa7.81□□□□□ -1.16
NPC1L1-204ENST00000546276 VPS13AQ96RL7 3174 aa7.81□□□□□ -1.16
NPC1L1-204ENST00000546276 SPEGQ15772 3267 aa7.81□□□□□ -1.16
NPC1L1-204ENST00000546276 CNBPP62633 177 aaKnown RBP7.81□□□□□ -1.16
NPC1L1-204ENST00000546276 LAMA1P25391 3075 aa7.81□□□□□ -1.16
NPC1L1-204ENST00000546276 USP34Q70CQ2 3546 aa7.81□□□□□ -1.16
NPC1L1-204ENST00000546276 MAP1AP78559 2803 aaPredicted RBP7.81□□□□□ -1.16
NPC1L1-204ENST00000546276 REV3LO60673 3130 aa7.8□□□□□ -1.16
NPC1L1-204ENST00000546276 ZNF861PO60384 105 aa7.8□□□□□ -1.16
NPC1L1-204ENST00000546276 KTN1-AS1Q86SY8 53 aa7.8□□□□□ -1.16
NPC1L1-204ENST00000546276 TYMSOSQ8TAI1 123 aa7.8□□□□□ -1.16
NPC1L1-204ENST00000546276 Q96NJ1 140 aa7.79□□□□□ -1.16
NPC1L1-204ENST00000546276 ATRQ13535 2644 aa7.79□□□□□ -1.16
NPC1L1-204ENST00000546276 MGAQ8IWI9 3026 aa7.79□□□□□ -1.16
NPC1L1-204ENST00000546276 FREM2Q5SZK8 3169 aa7.78□□□□□ -1.16
NPC1L1-204ENST00000546276 SSBP3-AS1Q7Z2R9 100 aa7.78□□□□□ -1.16
NPC1L1-204ENST00000546276 CR1P17927 2039 aa7.77□□□□□ -1.17
NPC1L1-204ENST00000546276 FP248Q71RG6 208 aaPredicted RBP7.77□□□□□ -1.17
NPC1L1-204ENST00000546276 MGAM2Q2M2H8 2515 aa7.76□□□□□ -1.17
NPC1L1-204ENST00000546276 MIR22HGQ0VDD5 57 aa7.75□□□□□ -1.17
NPC1L1-204ENST00000546276 CDC42SE1Q9NRR8 79 aa7.75□□□□□ -1.17
NPC1L1-204ENST00000546276 AKAP13Q12802 2813 aa7.74□□□□□ -1.17
NPC1L1-204ENST00000546276 NBEAQ8NFP9 2946 aa7.74□□□□□ -1.17
NPC1L1-204ENST00000546276 ANAPC11Q9NYG5 84 aa7.74□□□□□ -1.17
NPC1L1-204ENST00000546276 FAM229BQ4G0N7 80 aa7.73□□□□□ -1.17
NPC1L1-204ENST00000546276 DSPP15924 2871 aaKnown RBP7.73□□□□□ -1.17
NPC1L1-204ENST00000546276 A0A087WTM6 91 aa7.73□□□□□ -1.17
NPC1L1-204ENST00000546276 OXTP01178 125 aa7.71□□□□□ -1.17
NPC1L1-204ENST00000546276 PSORS1C2Q9UIG4 136 aa7.71□□□□□ -1.18
NPC1L1-204ENST00000546276 MAST4O15021 2626 aa7.71□□□□□ -1.18
NPC1L1-204ENST00000546276 PLA2G1BP04054 148 aaKnown RBP7.7□□□□□ -1.18
NPC1L1-204ENST00000546276 LCA10Q71F78 164 aa7.7□□□□□ -1.18
NPC1L1-204ENST00000546276 SPRR1AP35321 89 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms