RNA–Protein interactions for RNA: ENST00000543262.5

ME3-212, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,311 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-212ENST00000543262 PSCAO43653 123 aa13.25□□□□□ -0.29
ME3-212ENST00000543262 KRTAP7-1Q8IUC3 87 aa13.25□□□□□ -0.29
ME3-212ENST00000543262 IGLV5-37A0A075B6J1 123 aa13.24□□□□□ -0.29
ME3-212ENST00000543262 RPL37AP8A6NKH3 93 aa13.23□□□□□ -0.29
ME3-212ENST00000543262 IMUPQ9GZP8 106 aa13.23□□□□□ -0.29
ME3-212ENST00000543262 DNAH10Q8IVF4 4471 aa13.22□□□□□ -0.29
ME3-212ENST00000543262 NUPR2A6NF83 97 aa13.21□□□□□ -0.29
ME3-212ENST00000543262 Q6ZQT0 140 aa13.21□□□□□ -0.3
ME3-212ENST00000543262 DNAH7Q8WXX0 4024 aa13.2□□□□□ -0.3
ME3-212ENST00000543262 IGLV1-50A0A075B6I6 118 aa13.2□□□□□ -0.3
ME3-212ENST00000543262 GHRHP01286 108 aa13.2□□□□□ -0.3
ME3-212ENST00000543262 FAM19A5Q7Z5A7 132 aaPredicted RBP13.2□□□□□ -0.3
ME3-212ENST00000543262 LOC110117498A0A087WWA1 95 aa13.19□□□□□ -0.3
ME3-212ENST00000543262 CNBPP62633 177 aaKnown RBP13.18□□□□□ -0.3
ME3-212ENST00000543262 C5orf47Q569G3 176 aa13.18□□□□□ -0.3
ME3-212ENST00000543262 MRPL55Q7Z7F7 128 aaKnown RBP13.17□□□□□ -0.3
ME3-212ENST00000543262 DSCR8Q96T75 97 aa13.17□□□□□ -0.3
ME3-212ENST00000543262 PRYO14603 147 aa13.16□□□□□ -0.3
ME3-212ENST00000543262 Q6JHZ5 121 aa13.16□□□□□ -0.3
ME3-212ENST00000543262 KRTAP4-16G5E9R7 235 aaPredicted RBP13.15□□□□□ -0.3
ME3-212ENST00000543262 PLECQ15149 4684 aaKnown RBP13.15□□□□□ -0.3
ME3-212ENST00000543262 IGKV3D-7A0A0C4DH55 119 aa13.14□□□□□ -0.31
ME3-212ENST00000543262 A0A096LNI7 61 aa13.14□□□□□ -0.31
ME3-212ENST00000543262 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.13□□□□□ -0.31
ME3-212ENST00000543262 NBDYA0A0U1RRE5 68 aa13.13□□□□□ -0.31
ME3-212ENST00000543262 SPRR1AP35321 89 aa13.13□□□□□ -0.31
ME3-212ENST00000543262 PRKDCP78527 4128 aaKnown RBP13.13□□□□□ -0.31
ME3-212ENST00000543262 M0R2N4 97 aa13.13□□□□□ -0.31
ME3-212ENST00000543262 C9orf153Q5TBE3 101 aa13.13□□□□□ -0.31
ME3-212ENST00000543262 Q6ZRX8 168 aa13.13□□□□□ -0.31
ME3-212ENST00000543262 FAM236AA0A1B0GUQ0 79 aa13.12□□□□□ -0.31
ME3-212ENST00000543262 FAM236BA0A1B0GV22 79 aa13.12□□□□□ -0.31
ME3-212ENST00000543262 C16orf90A8MZG2 172 aa13.12□□□□□ -0.31
ME3-212ENST00000543262 C14orf177Q52M58 125 aa13.12□□□□□ -0.31
ME3-212ENST00000543262 IGKV2-24A0A0C4DH68 120 aa13.11□□□□□ -0.31
ME3-212ENST00000543262 ETDCA0A1B0GVM5 59 aa13.11□□□□□ -0.31
ME3-212ENST00000543262 PDE6GP18545 87 aa13.11□□□□□ -0.31
ME3-212ENST00000543262 MEGF8Q7Z7M0 2845 aa13.11□□□□□ -0.31
ME3-212ENST00000543262 TRBV7-4A0A0J9YYF1 115 aa13.1□□□□□ -0.31
ME3-212ENST00000543262 Q9BRP9 147 aa13.1□□□□□ -0.31
ME3-212ENST00000543262 DHRS4-AS1Q9P1J3 65 aa13.1□□□□□ -0.31
ME3-212ENST00000543262 DEFB105AQ8NG35 78 aa13.09□□□□□ -0.31
ME3-212ENST00000543262 C3orf22Q8N5N4 141 aa13.08□□□□□ -0.32
ME3-212ENST00000543262 LRCOL1A6NCL2 159 aa13.07□□□□□ -0.32
ME3-212ENST00000543262 UBL5Q9BZL1 73 aa13.07□□□□□ -0.32
ME3-212ENST00000543262 A0A1W2PNN7 141 aa13.07□□□□□ -0.32
ME3-212ENST00000543262 J3KT08 172 aa13.07□□□□□ -0.32
ME3-212ENST00000543262 Q8N377 158 aa13.06□□□□□ -0.32
ME3-212ENST00000543262 REG3GQ6UW15 175 aa13.05□□□□□ -0.32
ME3-212ENST00000543262 Q6ZRN7 208 aaPredicted RBP13.05□□□□□ -0.32
ME3-212ENST00000543262 UQCRQO14949 82 aa13.04□□□□□ -0.32
ME3-212ENST00000543262 LINC01547P58512 204 aaPredicted RBP13.04□□□□□ -0.32
ME3-212ENST00000543262 STARD9Q9P2P6 4700 aa13.04□□□□□ -0.32
ME3-212ENST00000543262 CHTF8P0CG12 524 aa13.01□□□□□ -0.33
ME3-212ENST00000543262 ATP5EP2Q5VTU8 51 aa13.01□□□□□ -0.33
ME3-212ENST00000543262 C9orf163Q8N9P6 203 aa13.01□□□□□ -0.33
ME3-212ENST00000543262 ST20-AS1Q8NBB2 130 aa13.01□□□□□ -0.33
ME3-212ENST00000543262 DNHD1Q96M86 4753 aa13.01□□□□□ -0.33
ME3-212ENST00000543262 A0A087WVE0 104 aa13□□□□□ -0.33
ME3-212ENST00000543262 ERC2-IT1O76042 136 aa13□□□□□ -0.33
ME3-212ENST00000543262 UBE2BP63146 152 aa13□□□□□ -0.33
ME3-212ENST00000543262 HIST1H4AP62805 103 aaKnown RBP12.99□□□□□ -0.33
ME3-212ENST00000543262 Q6ZVQ6 151 aa12.99□□□□□ -0.33
ME3-212ENST00000543262 VPS13DQ5THJ4 4388 aa12.98□□□□□ -0.33
ME3-212ENST00000543262 IGLV5-48A0A075B6I7 105 aa12.96□□□□□ -0.33
ME3-212ENST00000543262 HAMPP81172 84 aa12.94□□□□□ -0.34
ME3-212ENST00000543262 PHF5AQ7RTV0 110 aaKnown RBP12.94□□□□□ -0.34
ME3-212ENST00000543262 FAM19A1Q7Z5A9 133 aa12.94□□□□□ -0.34
ME3-212ENST00000543262 COX7CP15954 63 aa12.92□□□□□ -0.34
ME3-212ENST00000543262 PRLHP81277 87 aa12.91□□□□□ -0.34
ME3-212ENST00000543262 KRTAP11-1Q8IUC1 163 aa12.91□□□□□ -0.34
ME3-212ENST00000543262 PKIGQ9Y2B9 76 aa12.91□□□□□ -0.34
ME3-212ENST00000543262 RPS28P62857 69 aaKnown RBP12.9□□□□□ -0.34
ME3-212ENST00000543262 ATOX1O00244 68 aa12.89□□□□□ -0.35
ME3-212ENST00000543262 TNP2Q05952 138 aa12.89□□□□□ -0.35
ME3-212ENST00000543262 PANO1I0J062 215 aa12.88□□□□□ -0.35
ME3-212ENST00000543262 CRYGAP11844 174 aa12.88□□□□□ -0.35
ME3-212ENST00000543262 LINC00474Q9P2X8 69 aa12.88□□□□□ -0.35
ME3-212ENST00000543262 A0A087WTM6 91 aa12.87□□□□□ -0.35
ME3-212ENST00000543262 CXCL6P80162 114 aa12.86□□□□□ -0.35
ME3-212ENST00000543262 Q6ZR54 194 aa12.86□□□□□ -0.35
ME3-212ENST00000543262 HIGD2AQ9BW72 106 aa12.85□□□□□ -0.35
ME3-212ENST00000543262 C1orf137Q5JT78 98 aa12.84□□□□□ -0.35
ME3-212ENST00000543262 SMIM29Q86T20 159 aa12.84□□□□□ -0.35
ME3-212ENST00000543262 C3orf84H3BNL1 204 aa12.84□□□□□ -0.35
ME3-212ENST00000543262 DPH3Q96FX2 82 aa12.84□□□□□ -0.35
ME3-212ENST00000543262 A0A1W2PNM2 257 aa12.82□□□□□ -0.36
ME3-212ENST00000543262 SCXQ7RTU7 201 aa12.82□□□□□ -0.36
ME3-212ENST00000543262 FUSP35637 526 aaKnown RBP eCLIP12.82□□□□□ -0.36
ME3-212ENST00000543262 KMT2AQ03164 3969 aa12.81□□□□□ -0.36
ME3-212ENST00000543262 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.8□□□□□ -0.36
ME3-212ENST00000543262 EPM2AB3EWF7 344 aa12.8□□□□□ -0.36
ME3-212ENST00000543262 NREPQ16612 68 aa12.8□□□□□ -0.36
ME3-212ENST00000543262 FBN3Q75N90 2809 aa12.79□□□□□ -0.36
ME3-212ENST00000543262 TMEM258P61165 79 aa12.79□□□□□ -0.36
ME3-212ENST00000543262 SPACA4Q8TDM5 124 aa12.79□□□□□ -0.36
ME3-212ENST00000543262 H0Y9J4 135 aa12.78□□□□□ -0.36
ME3-212ENST00000543262 TGP01266 2768 aa12.78□□□□□ -0.36
ME3-212ENST00000543262 CYSTM1Q9H1C7 97 aa12.78□□□□□ -0.36
ME3-212ENST00000543262 Q8NBF4 154 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms