RNA–Protein interactions for RNA: ENST00000543155.5

COPS7A-215, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-215ENST00000543155 K7EIL1 84 aa12.11□□□□□ -0.47
COPS7A-215ENST00000543155 CASC10Q5T4H9 136 aa12.11□□□□□ -0.47
COPS7A-215ENST00000543155 IGLV5-37A0A075B6J1 123 aa12.09□□□□□ -0.47
COPS7A-215ENST00000543155 HAMPP81172 84 aa12.09□□□□□ -0.47
COPS7A-215ENST00000543155 BAHCC1Q9P281 2608 aa12.09□□□□□ -0.47
COPS7A-215ENST00000543155 CXCL6P80162 114 aa12.08□□□□□ -0.48
COPS7A-215ENST00000543155 FLNBO75369 2602 aaKnown RBP12.07□□□□□ -0.48
COPS7A-215ENST00000543155 DNAH1Q9P2D7 4330 aa12.06□□□□□ -0.48
COPS7A-215ENST00000543155 PRYO14603 147 aa12.06□□□□□ -0.48
COPS7A-215ENST00000543155 FAM168BA1KXE4 195 aa12.04□□□□□ -0.48
COPS7A-215ENST00000543155 DHRS4-AS1Q9P1J3 65 aa12.04□□□□□ -0.48
COPS7A-215ENST00000543155 IGLV1-50A0A075B6I6 118 aa12.04□□□□□ -0.48
COPS7A-215ENST00000543155 HUWE1Q7Z6Z7 4374 aaKnown RBP12.03□□□□□ -0.48
COPS7A-215ENST00000543155 Q6ZRX8 168 aa12.03□□□□□ -0.48
COPS7A-215ENST00000543155 SMIM20Q8N5G0 67 aa12.02□□□□□ -0.48
COPS7A-215ENST00000543155 RPL37AP8A6NKH3 93 aa12.02□□□□□ -0.49
COPS7A-215ENST00000543155 KRTAP4-16G5E9R7 235 aaPredicted RBP12.02□□□□□ -0.49
COPS7A-215ENST00000543155 BCE1O60756 84 aa12.02□□□□□ -0.49
COPS7A-215ENST00000543155 LOC107984640A0A0U1RRK4 108 aa12.01□□□□□ -0.49
COPS7A-215ENST00000543155 SPRR1AP35321 89 aa12.01□□□□□ -0.49
COPS7A-215ENST00000543155 Q8N377 158 aa12.01□□□□□ -0.49
COPS7A-215ENST00000543155 NOTCH1P46531 2555 aa12.01□□□□□ -0.49
COPS7A-215ENST00000543155 ETDCA0A1B0GVM5 59 aa12□□□□□ -0.49
COPS7A-215ENST00000543155 DEFB105AQ8NG35 78 aa12□□□□□ -0.49
COPS7A-215ENST00000543155 CYSTM1Q9H1C7 97 aa12□□□□□ -0.49
COPS7A-215ENST00000543155 KRTAP7-1Q8IUC3 87 aa11.99□□□□□ -0.49
COPS7A-215ENST00000543155 Q9BRP9 147 aa11.98□□□□□ -0.49
COPS7A-215ENST00000543155 FAM19A5Q7Z5A7 132 aaPredicted RBP11.98□□□□□ -0.49
COPS7A-215ENST00000543155 MRPL55Q7Z7F7 128 aaKnown RBP11.98□□□□□ -0.49
COPS7A-215ENST00000543155 IGLV5-48A0A075B6I7 105 aa11.96□□□□□ -0.49
COPS7A-215ENST00000543155 TMEM258P61165 79 aa11.95□□□□□ -0.5
COPS7A-215ENST00000543155 SCXQ7RTU7 201 aa11.95□□□□□ -0.5
COPS7A-215ENST00000543155 TRAV7A0A075B6U4 112 aa11.93□□□□□ -0.5
COPS7A-215ENST00000543155 NBEAL1Q6ZS30 2694 aa11.91□□□□□ -0.5
COPS7A-215ENST00000543155 NREPQ16612 68 aa11.91□□□□□ -0.5
COPS7A-215ENST00000543155 KRTAP1-5Q9BYS1 174 aa11.9□□□□□ -0.5
COPS7A-215ENST00000543155 COL6A5A8TX70 2615 aa11.9□□□□□ -0.5
COPS7A-215ENST00000543155 REG3GQ6UW15 175 aa11.9□□□□□ -0.5
COPS7A-215ENST00000543155 ST20-AS1Q8NBB2 130 aa11.9□□□□□ -0.5
COPS7A-215ENST00000543155 TNP2Q05952 138 aa11.89□□□□□ -0.51
COPS7A-215ENST00000543155 A0A1B0GW54 56 aa11.89□□□□□ -0.51
COPS7A-215ENST00000543155 C3orf84H3BNL1 204 aa11.89□□□□□ -0.51
COPS7A-215ENST00000543155 FUSP35637 526 aaKnown RBP eCLIP11.88□□□□□ -0.51
COPS7A-215ENST00000543155 CNBPP62633 177 aaKnown RBP11.88□□□□□ -0.51
COPS7A-215ENST00000543155 UBE2BP63146 152 aa11.87□□□□□ -0.51
COPS7A-215ENST00000543155 C20orf197Q8N268 126 aa11.87□□□□□ -0.51
COPS7A-215ENST00000543155 J3KT08 172 aa11.87□□□□□ -0.51
COPS7A-215ENST00000543155 UBE2DNLQ8IWF7 75 aa11.87□□□□□ -0.51
COPS7A-215ENST00000543155 C16orf90A8MZG2 172 aa11.86□□□□□ -0.51
COPS7A-215ENST00000543155 PSCAO43653 123 aa11.86□□□□□ -0.51
COPS7A-215ENST00000543155 ERC2-IT1O76042 136 aa11.86□□□□□ -0.51
COPS7A-215ENST00000543155 C1orf137Q5JT78 98 aa11.86□□□□□ -0.51
COPS7A-215ENST00000543155 A0A096LNI7 61 aa11.85□□□□□ -0.51
COPS7A-215ENST00000543155 APLNQ9ULZ1 77 aa11.84□□□□□ -0.51
COPS7A-215ENST00000543155 A0A1W2PNM2 257 aa11.84□□□□□ -0.51
COPS7A-215ENST00000543155 BPY2O14599 106 aa11.84□□□□□ -0.51
COPS7A-215ENST00000543155 IGKV4-1P06312 121 aa11.84□□□□□ -0.51
COPS7A-215ENST00000543155 RPS28P62857 69 aaKnown RBP11.83□□□□□ -0.52
COPS7A-215ENST00000543155 Q8NBF4 154 aa11.82□□□□□ -0.52
COPS7A-215ENST00000543155 IGKV2-24A0A0C4DH68 120 aa11.81□□□□□ -0.52
COPS7A-215ENST00000543155 Q8N9L7 120 aa11.81□□□□□ -0.52
COPS7A-215ENST00000543155 C14orf177Q52M58 125 aa11.81□□□□□ -0.52
COPS7A-215ENST00000543155 DPH3Q96FX2 82 aa11.8□□□□□ -0.52
COPS7A-215ENST00000543155 A0A1W2PNN7 141 aa11.79□□□□□ -0.52
COPS7A-215ENST00000543155 KLKP1Q107X0 134 aa11.78□□□□□ -0.52
COPS7A-215ENST00000543155 SPRR4Q96PI1 79 aa11.78□□□□□ -0.52
COPS7A-215ENST00000543155 SMIM29Q86T20 159 aa11.77□□□□□ -0.53
COPS7A-215ENST00000543155 B9D2Q9BPU9 175 aa11.76□□□□□ -0.53
COPS7A-215ENST00000543155 DNAH9Q9NYC9 4486 aa11.76□□□□□ -0.53
COPS7A-215ENST00000543155 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.75□□□□□ -0.53
COPS7A-215ENST00000543155 F8WEM9 126 aa11.75□□□□□ -0.53
COPS7A-215ENST00000543155 DYNC2H1Q8NCM8 4307 aaKnown RBP11.75□□□□□ -0.53
COPS7A-215ENST00000543155 DNAH10Q8IVF4 4471 aa11.75□□□□□ -0.53
COPS7A-215ENST00000543155 PRLHP81277 87 aa11.74□□□□□ -0.53
COPS7A-215ENST00000543155 H7BZZ5 65 aa11.74□□□□□ -0.53
COPS7A-215ENST00000543155 LINC00476Q8WZB0 136 aa11.73□□□□□ -0.53
COPS7A-215ENST00000543155 COL7A1Q02388 2944 aa11.72□□□□□ -0.53
COPS7A-215ENST00000543155 MGAM2Q2M2H8 2515 aa11.72□□□□□ -0.53
COPS7A-215ENST00000543155 SNURFQ9Y675 71 aa11.72□□□□□ -0.53
COPS7A-215ENST00000543155 FAM236DA0A1B0GTK5 79 aa11.71□□□□□ -0.53
COPS7A-215ENST00000543155 FAM236CP0DP71 79 aa11.71□□□□□ -0.53
COPS7A-215ENST00000543155 STAB2Q8WWQ8 2551 aa11.7□□□□□ -0.54
COPS7A-215ENST00000543155 LYSTQ99698 3801 aa11.7□□□□□ -0.54
COPS7A-215ENST00000543155 PKIGQ9Y2B9 76 aa11.7□□□□□ -0.54
COPS7A-215ENST00000543155 CHTF8P0CG12 524 aa11.69□□□□□ -0.54
COPS7A-215ENST00000543155 HIGD2AQ9BW72 106 aa11.69□□□□□ -0.54
COPS7A-215ENST00000543155 OCR1Q9BZK8 76 aa11.68□□□□□ -0.54
COPS7A-215ENST00000543155 PHF5AQ7RTV0 110 aaKnown RBP11.68□□□□□ -0.54
COPS7A-215ENST00000543155 IGLV8-61A0A075B6I0 122 aa11.67□□□□□ -0.54
COPS7A-215ENST00000543155 NBDYA0A0U1RRE5 68 aa11.67□□□□□ -0.54
COPS7A-215ENST00000543155 NUPR2A6NF83 97 aa11.67□□□□□ -0.54
COPS7A-215ENST00000543155 NDUFC1O43677 76 aa11.67□□□□□ -0.54
COPS7A-215ENST00000543155 IGFL1Q6UW32 110 aa11.67□□□□□ -0.54
COPS7A-215ENST00000543155 C9orf163Q8N9P6 203 aa11.67□□□□□ -0.54
COPS7A-215ENST00000543155 SVIPQ8NHG7 77 aa11.67□□□□□ -0.54
COPS7A-215ENST00000543155 LRCOL1A6NCL2 159 aa11.66□□□□□ -0.54
COPS7A-215ENST00000543155 MDFIQ99750 246 aa11.66□□□□□ -0.54
COPS7A-215ENST00000543155 TMEM254Q8TBM7 123 aa11.65□□□□□ -0.54
COPS7A-215ENST00000543155 H0Y9J4 135 aa11.65□□□□□ -0.55
COPS7A-215ENST00000543155 OXTP01178 125 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms