RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 ZNF561-AS1K7EIQ3 104 aa9.8□□□□□ -0.84
DDX55-209ENST00000542286 IGKV2D-24A0A075B6R9 120 aa9.8□□□□□ -0.84
DDX55-209ENST00000542286 KRTAP26-1Q6PEX3 210 aa9.8□□□□□ -0.84
DDX55-209ENST00000542286 C15orf56Q8N910 161 aa9.8□□□□□ -0.84
DDX55-209ENST00000542286 C11orf45Q8TAV5 145 aa9.8□□□□□ -0.84
DDX55-209ENST00000542286 F8WEM9 126 aa9.79□□□□□ -0.84
DDX55-209ENST00000542286 FP248Q71RG6 208 aaPredicted RBP9.79□□□□□ -0.84
DDX55-209ENST00000542286 SMIM26A0A096LP01 95 aa9.79□□□□□ -0.84
DDX55-209ENST00000542286 C1orf43Q9BWL3 253 aa9.79□□□□□ -0.84
DDX55-209ENST00000542286 LAMTOR3Q9UHA4 124 aa9.79□□□□□ -0.84
DDX55-209ENST00000542286 EGFEM1PQ0D2K5 195 aa9.78□□□□□ -0.84
DDX55-209ENST00000542286 Q6ZVQ6 151 aa9.78□□□□□ -0.84
DDX55-209ENST00000542286 LINC00575Q6W349 94 aa9.77□□□□□ -0.85
DDX55-209ENST00000542286 LOC110117498A0A087WWA1 95 aa9.76□□□□□ -0.85
DDX55-209ENST00000542286 CASC10Q5T4H9 136 aa9.76□□□□□ -0.85
DDX55-209ENST00000542286 IGLV6-57P01721 117 aa9.75□□□□□ -0.85
DDX55-209ENST00000542286 Q6ZQY7 126 aa9.75□□□□□ -0.85
DDX55-209ENST00000542286 LINC00474Q9P2X8 69 aa9.75□□□□□ -0.85
DDX55-209ENST00000542286 PKIGQ9Y2B9 76 aa9.74□□□□□ -0.85
DDX55-209ENST00000542286 TRBV7-6A0A0J9YX20 115 aa9.73□□□□□ -0.85
DDX55-209ENST00000542286 Q6ZRP5 223 aa9.73□□□□□ -0.85
DDX55-209ENST00000542286 TM2D3Q9BRN9 247 aa9.73□□□□□ -0.85
DDX55-209ENST00000542286 DNAH1Q9P2D7 4330 aa9.72□□□□□ -0.85
DDX55-209ENST00000542286 CXCL6P80162 114 aa9.72□□□□□ -0.85
DDX55-209ENST00000542286 GVQW2A0A096LPI5 108 aaPredicted RBP9.7□□□□□ -0.86
DDX55-209ENST00000542286 VPREB1P12018 145 aa9.7□□□□□ -0.86
DDX55-209ENST00000542286 SCXQ7RTU7 201 aa9.7□□□□□ -0.86
DDX55-209ENST00000542286 DNAH9Q9NYC9 4486 aa9.7□□□□□ -0.86
DDX55-209ENST00000542286 H3BNG1 76 aa9.69□□□□□ -0.86
DDX55-209ENST00000542286 NDUFC1O43677 76 aa9.69□□□□□ -0.86
DDX55-209ENST00000542286 ZNF73O43830 326 aaPredicted RBP9.69□□□□□ -0.86
DDX55-209ENST00000542286 LINC00588Q9Y4M8 146 aa9.69□□□□□ -0.86
DDX55-209ENST00000542286 TRBV7-4A0A0J9YYF1 115 aa9.68□□□□□ -0.86
DDX55-209ENST00000542286 DNAH7Q8WXX0 4024 aa9.68□□□□□ -0.86
DDX55-209ENST00000542286 LINC01556Q5JQF7 62 aa9.68□□□□□ -0.86
DDX55-209ENST00000542286 PDE6GP18545 87 aa9.67□□□□□ -0.86
DDX55-209ENST00000542286 DIRC1Q969H9 104 aa9.67□□□□□ -0.86
DDX55-209ENST00000542286 FAM168BA1KXE4 195 aa9.67□□□□□ -0.86
DDX55-209ENST00000542286 SERTAD4-AS1Q5TG53 156 aa9.67□□□□□ -0.86
DDX55-209ENST00000542286 MUC7Q8TAX7 377 aa9.67□□□□□ -0.86
DDX55-209ENST00000542286 K7EIL1 84 aa9.66□□□□□ -0.86
DDX55-209ENST00000542286 BRK1Q8WUW1 75 aa9.66□□□□□ -0.86
DDX55-209ENST00000542286 SYCNQ0VAF6 134 aa9.65□□□□□ -0.86
DDX55-209ENST00000542286 NREPQ16612 68 aa9.65□□□□□ -0.86
DDX55-209ENST00000542286 COX7BP24311 80 aa9.64□□□□□ -0.87
DDX55-209ENST00000542286 ATP5EP56381 51 aaPredicted RBP9.64□□□□□ -0.87
DDX55-209ENST00000542286 TMEM254Q8TBM7 123 aa9.64□□□□□ -0.87
DDX55-209ENST00000542286 SRRM2Q9UQ35 2752 aaKnown RBP9.64□□□□□ -0.87
DDX55-209ENST00000542286 RPL37AP8A6NKH3 93 aa9.63□□□□□ -0.87
DDX55-209ENST00000542286 A0A0U1RQV1 116 aa9.63□□□□□ -0.87
DDX55-209ENST00000542286 BPY2O14599 106 aa9.63□□□□□ -0.87
DDX55-209ENST00000542286 FAM229BQ4G0N7 80 aa9.62□□□□□ -0.87
DDX55-209ENST00000542286 MPLKIPQ8TAP9 179 aa9.62□□□□□ -0.87
DDX55-209ENST00000542286 DNAH10OSP0CZ25 163 aa9.61□□□□□ -0.87
DDX55-209ENST00000542286 ELOF1P60002 83 aaKnown RBP9.61□□□□□ -0.87
DDX55-209ENST00000542286 M0R378 163 aa9.6□□□□□ -0.87
DDX55-209ENST00000542286 DEFB105AQ8NG35 78 aa9.6□□□□□ -0.87
DDX55-209ENST00000542286 H3BQ85 93 aa9.59□□□□□ -0.87
DDX55-209ENST00000542286 Q8N9L7 120 aa9.59□□□□□ -0.87
DDX55-209ENST00000542286 C7orf33Q8WU49 177 aa9.58□□□□□ -0.88
DDX55-209ENST00000542286 F8WDY8 70 aa9.58□□□□□ -0.88
DDX55-209ENST00000542286 ERC2-IT1O76042 136 aa9.57□□□□□ -0.88
DDX55-209ENST00000542286 PLECQ15149 4684 aaKnown RBP9.57□□□□□ -0.88
DDX55-209ENST00000542286 NKAPP1Q8N9T2 125 aa9.57□□□□□ -0.88
DDX55-209ENST00000542286 LINC00528Q8N1L1 170 aa9.56□□□□□ -0.88
DDX55-209ENST00000542286 C1orf195Q5TG92 126 aa9.56□□□□□ -0.88
DDX55-209ENST00000542286 KRTAP7-1Q8IUC3 87 aa9.56□□□□□ -0.88
DDX55-209ENST00000542286 KRTAP1-5Q9BYS1 174 aa9.56□□□□□ -0.88
DDX55-209ENST00000542286 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.55□□□□□ -0.88
DDX55-209ENST00000542286 PRYO14603 147 aa9.54□□□□□ -0.88
DDX55-209ENST00000542286 FUSP35637 526 aaKnown RBP eCLIP9.53□□□□□ -0.88
DDX55-209ENST00000542286 OCR1Q9BZK8 76 aa9.53□□□□□ -0.88
DDX55-209ENST00000542286 IGKV4-1P06312 121 aa9.52□□□□□ -0.89
DDX55-209ENST00000542286 V9GYY9 64 aa9.51□□□□□ -0.89
DDX55-209ENST00000542286 ST20-AS1Q8NBB2 130 aa9.51□□□□□ -0.89
DDX55-209ENST00000542286 HIGD2AQ9BW72 106 aa9.51□□□□□ -0.89
DDX55-209ENST00000542286 IGKV2-24A0A0C4DH68 120 aa9.49□□□□□ -0.89
DDX55-209ENST00000542286 MDFIQ99750 246 aa9.48□□□□□ -0.89
DDX55-209ENST00000542286 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.48□□□□□ -0.89
DDX55-209ENST00000542286 Q9BRP9 147 aa9.48□□□□□ -0.89
DDX55-209ENST00000542286 C3orf84H3BNL1 204 aa9.47□□□□□ -0.89
DDX55-209ENST00000542286 KCNQ1DNQ9H478 68 aa9.47□□□□□ -0.89
DDX55-209ENST00000542286 SEC61GP60059 68 aa9.46□□□□□ -0.9
DDX55-209ENST00000542286 Q8N377 158 aa9.46□□□□□ -0.9
DDX55-209ENST00000542286 PRKDCP78527 4128 aaKnown RBP9.46□□□□□ -0.9
DDX55-209ENST00000542286 A0A0G2JQZ4 141 aa9.46□□□□□ -0.9
DDX55-209ENST00000542286 A0A1W2PNN7 141 aa9.46□□□□□ -0.9
DDX55-209ENST00000542286 STARD9Q9P2P6 4700 aa9.44□□□□□ -0.9
DDX55-209ENST00000542286 IGLV1-50A0A075B6I6 118 aa9.43□□□□□ -0.9
DDX55-209ENST00000542286 LRCOL1A6NCL2 159 aa9.43□□□□□ -0.9
DDX55-209ENST00000542286 FAM30AQ9NZY2 134 aa9.42□□□□□ -0.9
DDX55-209ENST00000542286 A0A096LNI7 61 aa9.41□□□□□ -0.9
DDX55-209ENST00000542286 ETDCA0A1B0GVM5 59 aa9.41□□□□□ -0.9
DDX55-209ENST00000542286 TLX1NBP0CAT3 122 aa9.41□□□□□ -0.9
DDX55-209ENST00000542286 CHTF8P0CG12 524 aa9.41□□□□□ -0.9
DDX55-209ENST00000542286 Q6ZRX8 168 aa9.41□□□□□ -0.9
DDX55-209ENST00000542286 MRPL55Q7Z7F7 128 aaKnown RBP9.41□□□□□ -0.9
DDX55-209ENST00000542286 KRTAP4-16G5E9R7 235 aaPredicted RBP9.41□□□□□ -0.9
DDX55-209ENST00000542286 UBE2DNLQ8IWF7 75 aa9.41□□□□□ -0.9
DDX55-209ENST00000542286 PSCAO43653 123 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms