RNA–Protein interactions for RNA: ENST00000540746.6

LSM14A-202, Transcript of LSM14A, mRNA processing body assembly factor, humanhuman

TSL 2 BASIC

Gene LSM14A, Length 2,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM14A-202ENST00000540746 PLA2G2DQ9UNK4 145 aa13.54□□□□□ -0.24
LSM14A-202ENST00000540746 RMI2Q96E14 147 aa13.53□□□□□ -0.24
LSM14A-202ENST00000540746 DNAH10Q8IVF4 4471 aa13.52□□□□□ -0.24
LSM14A-202ENST00000540746 TENM2Q9NT68 2774 aa13.52□□□□□ -0.24
LSM14A-202ENST00000540746 DNAH9Q9NYC9 4486 aa13.52□□□□□ -0.25
LSM14A-202ENST00000540746 ATP5EP2Q5VTU8 51 aa13.52□□□□□ -0.25
LSM14A-202ENST00000540746 PDE6GP18545 87 aa13.51□□□□□ -0.25
LSM14A-202ENST00000540746 KRTAP1-5Q9BYS1 174 aa13.51□□□□□ -0.25
LSM14A-202ENST00000540746 RPL37AP8A6NKH3 93 aa13.51□□□□□ -0.25
LSM14A-202ENST00000540746 ATOX1O00244 68 aa13.5□□□□□ -0.25
LSM14A-202ENST00000540746 GHRHP01286 108 aa13.5□□□□□ -0.25
LSM14A-202ENST00000540746 FAM19A1Q7Z5A9 133 aa13.5□□□□□ -0.25
LSM14A-202ENST00000540746 C3orf22Q8N5N4 141 aa13.49□□□□□ -0.25
LSM14A-202ENST00000540746 IGLV5-37A0A075B6J1 123 aa13.48□□□□□ -0.25
LSM14A-202ENST00000540746 CSMD3Q7Z407 3707 aa13.48□□□□□ -0.25
LSM14A-202ENST00000540746 IGLV1-50A0A075B6I6 118 aa13.47□□□□□ -0.25
LSM14A-202ENST00000540746 KRTAP4-16G5E9R7 235 aaPredicted RBP13.47□□□□□ -0.25
LSM14A-202ENST00000540746 UQCRQO14949 82 aa13.47□□□□□ -0.25
LSM14A-202ENST00000540746 Q6ZVQ6 151 aa13.47□□□□□ -0.25
LSM14A-202ENST00000540746 COX7CP15954 63 aa13.45□□□□□ -0.26
LSM14A-202ENST00000540746 LINC01547P58512 204 aaPredicted RBP13.44□□□□□ -0.26
LSM14A-202ENST00000540746 DNAH7Q8WXX0 4024 aa13.43□□□□□ -0.26
LSM14A-202ENST00000540746 Q6ZRX8 168 aa13.43□□□□□ -0.26
LSM14A-202ENST00000540746 FAM19A5Q7Z5A7 132 aaPredicted RBP13.43□□□□□ -0.26
LSM14A-202ENST00000540746 MDFIQ99750 246 aa13.43□□□□□ -0.26
LSM14A-202ENST00000540746 Q9BRP9 147 aa13.43□□□□□ -0.26
LSM14A-202ENST00000540746 SPRR1AP35321 89 aa13.42□□□□□ -0.26
LSM14A-202ENST00000540746 C9orf153Q5TBE3 101 aa13.42□□□□□ -0.26
LSM14A-202ENST00000540746 LOC107984640A0A0U1RRK4 108 aa13.42□□□□□ -0.26
LSM14A-202ENST00000540746 Q8N377 158 aa13.42□□□□□ -0.26
LSM14A-202ENST00000540746 DEFB105AQ8NG35 78 aa13.42□□□□□ -0.26
LSM14A-202ENST00000540746 PRYO14603 147 aa13.41□□□□□ -0.26
LSM14A-202ENST00000540746 HAMPP81172 84 aa13.41□□□□□ -0.26
LSM14A-202ENST00000540746 MRPL55Q7Z7F7 128 aaKnown RBP13.4□□□□□ -0.26
LSM14A-202ENST00000540746 APLNQ9ULZ1 77 aa13.39□□□□□ -0.27
LSM14A-202ENST00000540746 DYNC2H1Q8NCM8 4307 aaKnown RBP13.39□□□□□ -0.27
LSM14A-202ENST00000540746 DHRS4-AS1Q9P1J3 65 aa13.38□□□□□ -0.27
LSM14A-202ENST00000540746 SERP2Q8N6R1 65 aa13.37□□□□□ -0.27
LSM14A-202ENST00000540746 ETDCA0A1B0GVM5 59 aa13.37□□□□□ -0.27
LSM14A-202ENST00000540746 ST20-AS1Q8NBB2 130 aa13.34□□□□□ -0.27
LSM14A-202ENST00000540746 A0A096LNI7 61 aa13.34□□□□□ -0.27
LSM14A-202ENST00000540746 CRYGAP11844 174 aa13.34□□□□□ -0.27
LSM14A-202ENST00000540746 CXCL6P80162 114 aa13.34□□□□□ -0.27
LSM14A-202ENST00000540746 UBE2DNLQ8IWF7 75 aa13.34□□□□□ -0.27
LSM14A-202ENST00000540746 CYSTM1Q9H1C7 97 aa13.33□□□□□ -0.28
LSM14A-202ENST00000540746 IGLV5-48A0A075B6I7 105 aa13.32□□□□□ -0.28
LSM14A-202ENST00000540746 ERC2-IT1O76042 136 aa13.32□□□□□ -0.28
LSM14A-202ENST00000540746 B9D2Q9BPU9 175 aa13.32□□□□□ -0.28
LSM14A-202ENST00000540746 CNBPP62633 177 aaKnown RBP13.32□□□□□ -0.28
LSM14A-202ENST00000540746 PSCAO43653 123 aa13.31□□□□□ -0.28
LSM14A-202ENST00000540746 SCXQ7RTU7 201 aa13.31□□□□□ -0.28
LSM14A-202ENST00000540746 PLECQ15149 4684 aaKnown RBP13.3□□□□□ -0.28
LSM14A-202ENST00000540746 IGKV2-24A0A0C4DH68 120 aa13.3□□□□□ -0.28
LSM14A-202ENST00000540746 C16orf90A8MZG2 172 aa13.29□□□□□ -0.28
LSM14A-202ENST00000540746 A0A1W2PNN7 141 aa13.28□□□□□ -0.28
LSM14A-202ENST00000540746 REG3GQ6UW15 175 aa13.28□□□□□ -0.28
LSM14A-202ENST00000540746 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.27□□□□□ -0.28
LSM14A-202ENST00000540746 TNP2Q05952 138 aa13.27□□□□□ -0.29
LSM14A-202ENST00000540746 UBE2BP63146 152 aa13.25□□□□□ -0.29
LSM14A-202ENST00000540746 C3orf84H3BNL1 204 aa13.25□□□□□ -0.29
LSM14A-202ENST00000540746 A0A1W2PNM2 257 aa13.21□□□□□ -0.29
LSM14A-202ENST00000540746 PRKDCP78527 4128 aaKnown RBP13.2□□□□□ -0.3
LSM14A-202ENST00000540746 CHTF8P0CG12 524 aa13.2□□□□□ -0.3
LSM14A-202ENST00000540746 NREPQ16612 68 aa13.2□□□□□ -0.3
LSM14A-202ENST00000540746 C1orf137Q5JT78 98 aa13.2□□□□□ -0.3
LSM14A-202ENST00000540746 SRRM2Q9UQ35 2752 aaKnown RBP13.19□□□□□ -0.3
LSM14A-202ENST00000540746 Q8N9L7 120 aa13.19□□□□□ -0.3
LSM14A-202ENST00000540746 LRCOL1A6NCL2 159 aa13.18□□□□□ -0.3
LSM14A-202ENST00000540746 PRLHP81277 87 aa13.18□□□□□ -0.3
LSM14A-202ENST00000540746 SMIM29Q86T20 159 aa13.18□□□□□ -0.3
LSM14A-202ENST00000540746 C14orf177Q52M58 125 aa13.17□□□□□ -0.3
LSM14A-202ENST00000540746 KRTAP11-1Q8IUC1 163 aa13.17□□□□□ -0.3
LSM14A-202ENST00000540746 NBDYA0A0U1RRE5 68 aa13.17□□□□□ -0.3
LSM14A-202ENST00000540746 SMIM20Q8N5G0 67 aa13.17□□□□□ -0.3
LSM14A-202ENST00000540746 STARD9Q9P2P6 4700 aa13.17□□□□□ -0.3
LSM14A-202ENST00000540746 BCE1O60756 84 aa13.16□□□□□ -0.3
LSM14A-202ENST00000540746 FUSP35637 526 aaKnown RBP eCLIP13.15□□□□□ -0.3
LSM14A-202ENST00000540746 NUPR2A6NF83 97 aa13.14□□□□□ -0.31
LSM14A-202ENST00000540746 Q6ZRN7 208 aaPredicted RBP13.14□□□□□ -0.31
LSM14A-202ENST00000540746 PHF5AQ7RTV0 110 aaKnown RBP13.14□□□□□ -0.31
LSM14A-202ENST00000540746 Q8NBF4 154 aa13.14□□□□□ -0.31
LSM14A-202ENST00000540746 TRAV7A0A075B6U4 112 aa13.13□□□□□ -0.31
LSM14A-202ENST00000540746 IGKV4-1P06312 121 aa13.13□□□□□ -0.31
LSM14A-202ENST00000540746 C9orf163Q8N9P6 203 aa13.13□□□□□ -0.31
LSM14A-202ENST00000540746 MEGF8Q7Z7M0 2845 aa13.11□□□□□ -0.31
LSM14A-202ENST00000540746 BPY2O14599 106 aa13.11□□□□□ -0.31
LSM14A-202ENST00000540746 C20orf197Q8N268 126 aa13.11□□□□□ -0.31
LSM14A-202ENST00000540746 A0A1B0GW54 56 aa13.1□□□□□ -0.31
LSM14A-202ENST00000540746 SPRR4Q96PI1 79 aa13.1□□□□□ -0.31
LSM14A-202ENST00000540746 A0A0G2JQZ4 141 aa13.1□□□□□ -0.31
LSM14A-202ENST00000540746 HIGD2AQ9BW72 106 aa13.1□□□□□ -0.31
LSM14A-202ENST00000540746 VPS13DQ5THJ4 4388 aa13.09□□□□□ -0.31
LSM14A-202ENST00000540746 LINC00476Q8WZB0 136 aa13.08□□□□□ -0.31
LSM14A-202ENST00000540746 PANO1I0J062 215 aa13.07□□□□□ -0.32
LSM14A-202ENST00000540746 TMEM258P61165 79 aa13.05□□□□□ -0.32
LSM14A-202ENST00000540746 EPM2AB3EWF7 344 aa13.03□□□□□ -0.32
LSM14A-202ENST00000540746 IGFL1Q6UW32 110 aa13.03□□□□□ -0.32
LSM14A-202ENST00000540746 F8WEM9 126 aa13.03□□□□□ -0.32
LSM14A-202ENST00000540746 KMT2AQ03164 3969 aa12.99□□□□□ -0.33
LSM14A-202ENST00000540746 IGLV8-61A0A075B6I0 122 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 128.1 ms