RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 Q8NDZ9 215 aa11.99□□□□□ -0.49
RAB40C-203ENST00000535977 PRYO14603 147 aa11.97□□□□□ -0.49
RAB40C-203ENST00000535977 KPRPQ5T749 579 aaPredicted RBP11.97□□□□□ -0.49
RAB40C-203ENST00000535977 ERC2-IT1O76042 136 aa11.97□□□□□ -0.49
RAB40C-203ENST00000535977 FUSP35637 526 aaKnown RBP eCLIP11.97□□□□□ -0.492e-6■■■□□ 19.1
RAB40C-203ENST00000535977 H3BQ85 93 aa11.96□□□□□ -0.49
RAB40C-203ENST00000535977 Q6ZTC4 211 aa11.96□□□□□ -0.49
RAB40C-203ENST00000535977 IGLV6-57P01721 117 aa11.95□□□□□ -0.5
RAB40C-203ENST00000535977 PDE6GP18545 87 aa11.95□□□□□ -0.5
RAB40C-203ENST00000535977 TRRAPQ9Y4A5 3859 aa11.95□□□□□ -0.5
RAB40C-203ENST00000535977 EGFEM1PQ0D2K5 195 aa11.95□□□□□ -0.5
RAB40C-203ENST00000535977 Q6ZQY7 126 aa11.95□□□□□ -0.5
RAB40C-203ENST00000535977 KRTAP24-1Q3LI83 254 aa11.94□□□□□ -0.5
RAB40C-203ENST00000535977 OXLD1Q5BKU9 147 aa11.94□□□□□ -0.5
RAB40C-203ENST00000535977 PMAIP1Q13794 54 aa11.94□□□□□ -0.5
RAB40C-203ENST00000535977 KRTAP10-11P60412 298 aa11.93□□□□□ -0.5
RAB40C-203ENST00000535977 Q8N9L7 120 aa11.93□□□□□ -0.5
RAB40C-203ENST00000535977 C6orf48Q9UBA6 75 aa11.93□□□□□ -0.5
RAB40C-203ENST00000535977 PRR15Q8IV56 129 aa11.92□□□□□ -0.5
RAB40C-203ENST00000535977 WFDC10BQ8IUB3 73 aa11.9□□□□□ -0.5
RAB40C-203ENST00000535977 OCR1Q9BZK8 76 aa11.9□□□□□ -0.5
RAB40C-203ENST00000535977 HIGD2AQ9BW72 106 aa11.89□□□□□ -0.51
RAB40C-203ENST00000535977 RETNQ9HD89 108 aa11.89□□□□□ -0.51
RAB40C-203ENST00000535977 CAMK2N2Q96S95 79 aa11.89□□□□□ -0.51
RAB40C-203ENST00000535977 KRTAP26-1Q6PEX3 210 aa11.88□□□□□ -0.51
RAB40C-203ENST00000535977 MDFIQ99750 246 aa11.88□□□□□ -0.51
RAB40C-203ENST00000535977 LRCOL1A6NCL2 159 aa11.87□□□□□ -0.51
RAB40C-203ENST00000535977 Q6ZRU5 148 aa11.86□□□□□ -0.51
RAB40C-203ENST00000535977 DIRC1Q969H9 104 aa11.86□□□□□ -0.51
RAB40C-203ENST00000535977 IGKV4-1P06312 121 aa11.86□□□□□ -0.51
RAB40C-203ENST00000535977 LINC01556Q5JQF7 62 aa11.86□□□□□ -0.51
RAB40C-203ENST00000535977 PKD1L1Q8TDX9 2849 aa11.84□□□□□ -0.51
RAB40C-203ENST00000535977 hDV103S1A0JD37 113 aa11.84□□□□□ -0.51
RAB40C-203ENST00000535977 DEFB131BA0A096LNP1 70 aa11.83□□□□□ -0.52
RAB40C-203ENST00000535977 DNHD1Q96M86 4753 aa11.83□□□□□ -0.52
RAB40C-203ENST00000535977 C11orf45Q8TAV5 145 aa11.83□□□□□ -0.52
RAB40C-203ENST00000535977 XAGE1AQ9HD64 81 aa11.83□□□□□ -0.52
RAB40C-203ENST00000535977 M0R378 163 aa11.82□□□□□ -0.52
RAB40C-203ENST00000535977 HIGD2BQ4VC39 106 aa11.82□□□□□ -0.52
RAB40C-203ENST00000535977 Q6ZRP5 223 aa11.82□□□□□ -0.52
RAB40C-203ENST00000535977 C15orf56Q8N910 161 aa11.81□□□□□ -0.52
RAB40C-203ENST00000535977 ZNF73O43830 326 aaPredicted RBP11.81□□□□□ -0.52
RAB40C-203ENST00000535977 VPREB1P12018 145 aa11.81□□□□□ -0.52
RAB40C-203ENST00000535977 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.81□□□□□ -0.52
RAB40C-203ENST00000535977 COX7BP24311 80 aa11.8□□□□□ -0.52
RAB40C-203ENST00000535977 Q1T7F1 81 aa11.8□□□□□ -0.52
RAB40C-203ENST00000535977 ELOF1P60002 83 aaKnown RBP11.78□□□□□ -0.52
RAB40C-203ENST00000535977 PSPHP1O15172 72 aa11.77□□□□□ -0.53
RAB40C-203ENST00000535977 DNAH10OSP0CZ25 163 aa11.76□□□□□ -0.53
RAB40C-203ENST00000535977 C1orf64Q8NEQ6 169 aa11.76□□□□□ -0.53
RAB40C-203ENST00000535977 IGKV2D-24A0A075B6R9 120 aa11.76□□□□□ -0.53
RAB40C-203ENST00000535977 SYCNQ0VAF6 134 aa11.74□□□□□ -0.53
RAB40C-203ENST00000535977 FAM30AQ9NZY2 134 aa11.74□□□□□ -0.53
RAB40C-203ENST00000535977 MGAM2Q2M2H8 2515 aa11.74□□□□□ -0.53
RAB40C-203ENST00000535977 ANK2Q01484 3957 aa11.73□□□□□ -0.53
RAB40C-203ENST00000535977 TRAV22A0A0B4J277 110 aa11.7□□□□□ -0.54
RAB40C-203ENST00000535977 SMIM29Q86T20 159 aa11.7□□□□□ -0.54
RAB40C-203ENST00000535977 NOTCH1P46531 2555 aa11.7□□□□□ -0.54
RAB40C-203ENST00000535977 TLX1NBP0CAT3 122 aa11.69□□□□□ -0.54
RAB40C-203ENST00000535977 LINC00528Q8N1L1 170 aa11.69□□□□□ -0.54
RAB40C-203ENST00000535977 C3orf84H3BNL1 204 aa11.68□□□□□ -0.54
RAB40C-203ENST00000535977 CD164Q04900 197 aa11.68□□□□□ -0.54
RAB40C-203ENST00000535977 PLA2G2DQ9UNK4 145 aa11.66□□□□□ -0.54
RAB40C-203ENST00000535977 NKAPP1Q8N9T2 125 aa11.66□□□□□ -0.54
RAB40C-203ENST00000535977 LCE6AA0A183 80 aa11.66□□□□□ -0.54
RAB40C-203ENST00000535977 A8MU10 97 aa11.65□□□□□ -0.54
RAB40C-203ENST00000535977 KCNQ1DNQ9H478 68 aa11.65□□□□□ -0.54
RAB40C-203ENST00000535977 NBEAL1Q6ZS30 2694 aa11.65□□□□□ -0.55
RAB40C-203ENST00000535977 PRR4Q16378 134 aa11.63□□□□□ -0.55
RAB40C-203ENST00000535977 LINC00588Q9Y4M8 146 aa11.63□□□□□ -0.55
RAB40C-203ENST00000535977 ZCCHC13Q8WW36 166 aaKnown RBP11.62□□□□□ -0.55
RAB40C-203ENST00000535977 A8MUN3 132 aa11.62□□□□□ -0.55
RAB40C-203ENST00000535977 CMYA5Q8N3K9 4069 aa11.61□□□□□ -0.55
RAB40C-203ENST00000535977 IGLV5-37A0A075B6J1 123 aa11.59□□□□□ -0.55
RAB40C-203ENST00000535977 PSCAO43653 123 aa11.59□□□□□ -0.55
RAB40C-203ENST00000535977 PRB2P02812 416 aaPredicted RBP11.59□□□□□ -0.55
RAB40C-203ENST00000535977 C7orf33Q8WU49 177 aa11.58□□□□□ -0.56
RAB40C-203ENST00000535977 DHRS4-AS1Q9P1J3 65 aa11.57□□□□□ -0.56
RAB40C-203ENST00000535977 SERTAD4-AS1Q5TG53 156 aa11.56□□□□□ -0.56
RAB40C-203ENST00000535977 CYP4F30PQ9H0H9 118 aa11.56□□□□□ -0.56
RAB40C-203ENST00000535977 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.55□□□□□ -0.56
RAB40C-203ENST00000535977 KRTAP21-3Q3LHN1 58 aa11.53□□□□□ -0.56
RAB40C-203ENST00000535977 Q5VV11 94 aa11.53□□□□□ -0.56
RAB40C-203ENST00000535977 ETDCA0A1B0GVM5 59 aa11.53□□□□□ -0.56
RAB40C-203ENST00000535977 ST20-AS1Q8NBB2 130 aa11.52□□□□□ -0.56
RAB40C-203ENST00000535977 K7EIL1 84 aa11.52□□□□□ -0.57
RAB40C-203ENST00000535977 MRPL55Q7Z7F7 128 aaKnown RBP11.52□□□□□ -0.57
RAB40C-203ENST00000535977 IGLV1-50A0A075B6I6 118 aa11.51□□□□□ -0.57
RAB40C-203ENST00000535977 TENM3Q9P273 2699 aa11.51□□□□□ -0.57
RAB40C-203ENST00000535977 SPRR1AP35321 89 aa11.51□□□□□ -0.57
RAB40C-203ENST00000535977 Q6ZRX8 168 aa11.51□□□□□ -0.57
RAB40C-203ENST00000535977 UBE2BP63146 152 aa11.5□□□□□ -0.57
RAB40C-203ENST00000535977 DEFB105AQ8NG35 78 aa11.5□□□□□ -0.57
RAB40C-203ENST00000535977 A0A1B0GW54 56 aa11.5□□□□□ -0.57
RAB40C-203ENST00000535977 KRTAP4-16G5E9R7 235 aaPredicted RBP11.49□□□□□ -0.57
RAB40C-203ENST00000535977 KTN1-AS1Q86SY8 53 aa11.48□□□□□ -0.57
RAB40C-203ENST00000535977 Q8N377 158 aa11.48□□□□□ -0.57
RAB40C-203ENST00000535977 RBM12B-AS1Q9P1G2 102 aa11.48□□□□□ -0.57
RAB40C-203ENST00000535977 IGLV5-48A0A075B6I7 105 aa11.47□□□□□ -0.57
RAB40C-203ENST00000535977 CASC10Q5T4H9 136 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms