RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 DEFA5Q01523 94 aa0.32□□□□□ -2.36
VBP1-203ENST00000535916 NHSQ6T4R5 1651 aa0.32□□□□□ -2.36
VBP1-203ENST00000535916 CACNA1EQ15878 2313 aa0.32□□□□□ -2.36
VBP1-203ENST00000535916 MADDQ8WXG6 1647 aa0.31□□□□□ -2.36
VBP1-203ENST00000535916 KMT2DO14686 5537 aa0.31□□□□□ -2.36
VBP1-203ENST00000535916 DDX60LQ5H9U9 1706 aaKnown RBP0.31□□□□□ -2.36
VBP1-203ENST00000535916 NRAPQ86VF7 1730 aa0.31□□□□□ -2.36
VBP1-203ENST00000535916 HEPN1Q6WQI6 88 aa0.31□□□□□ -2.36
VBP1-203ENST00000535916 USF3Q68DE3 2245 aa0.31□□□□□ -2.36
VBP1-203ENST00000535916 AHCTF1Q8WYP5 2266 aa0.31□□□□□ -2.36
VBP1-203ENST00000535916 DIP2AQ14689 1571 aa0.31□□□□□ -2.36
VBP1-203ENST00000535916 CDKN2A-AS1Q9UH64 79 aa0.3□□□□□ -2.36
VBP1-203ENST00000535916 PLXNC1O60486 1568 aa0.3□□□□□ -2.36
VBP1-203ENST00000535916 PIEZO2Q9H5I5 2752 aa0.3□□□□□ -2.36
VBP1-203ENST00000535916 PIEZO1Q92508 2521 aa0.3□□□□□ -2.36
VBP1-203ENST00000535916 EFCAB5A4FU69 1503 aa0.29□□□□□ -2.36
VBP1-203ENST00000535916 INO80Q9ULG1 1556 aaPredicted RBP0.29□□□□□ -2.36
VBP1-203ENST00000535916 C2CD3Q4AC94 2353 aa0.29□□□□□ -2.36
VBP1-203ENST00000535916 TPRP12270 2363 aaKnown RBP0.28□□□□□ -2.36
VBP1-203ENST00000535916 URB1O60287 2271 aaKnown RBP0.28□□□□□ -2.36
VBP1-203ENST00000535916 H3BVH4 76 aa0.28□□□□□ -2.36
VBP1-203ENST00000535916 NDUFA3O95167 84 aa0.28□□□□□ -2.36
VBP1-203ENST00000535916 WFDC13Q8IUB5 93 aa0.28□□□□□ -2.36
VBP1-203ENST00000535916 MACF1Q9UPN3 7388 aaKnown RBP0.28□□□□□ -2.36
VBP1-203ENST00000535916 RALGAPBQ86X10 1494 aa0.28□□□□□ -2.37
VBP1-203ENST00000535916 THOC2Q8NI27 1593 aaKnown RBP0.28□□□□□ -2.37
VBP1-203ENST00000535916 TJP1Q07157 1748 aa0.27□□□□□ -2.37
VBP1-203ENST00000535916 PRM1P04553 51 aa0.27□□□□□ -2.37
VBP1-203ENST00000535916 HILPDAQ9Y5L2 63 aa0.27□□□□□ -2.37
VBP1-203ENST00000535916 HFM1A2PYH4 1435 aa0.27□□□□□ -2.37
VBP1-203ENST00000535916 DEPDC5O75140 1603 aa0.26□□□□□ -2.37
VBP1-203ENST00000535916 IGSF10Q6WRI0 2623 aa0.26□□□□□ -2.37
VBP1-203ENST00000535916 SPTBN2O15020 2390 aa0.25□□□□□ -2.37
VBP1-203ENST00000535916 PTPRZ1P23471 2315 aaPredicted RBP0.25□□□□□ -2.37
VBP1-203ENST00000535916 GOLGA4Q13439 2230 aaKnown RBP0.25□□□□□ -2.37
VBP1-203ENST00000535916 CCDC180Q9P1Z9 1646 aa0.25□□□□□ -2.37
VBP1-203ENST00000535916 KCNQ1DNQ9H478 68 aa0.25□□□□□ -2.37
VBP1-203ENST00000535916 CHD9Q3L8U1 2897 aa0.25□□□□□ -2.37
VBP1-203ENST00000535916 ERICH3Q5RHP9 1530 aa0.24□□□□□ -2.37
VBP1-203ENST00000535916 PLCE1Q9P212 2302 aa0.24□□□□□ -2.37
VBP1-203ENST00000535916 PTPRQQ9UMZ3 2332 aa0.24□□□□□ -2.37
VBP1-203ENST00000535916 H0YAA0 97 aa0.24□□□□□ -2.37
VBP1-203ENST00000535916 ENHOQ6UWT2 76 aa0.24□□□□□ -2.37
VBP1-203ENST00000535916 TENM4Q6N022 2769 aa0.24□□□□□ -2.37
VBP1-203ENST00000535916 C3P01024 1663 aa0.24□□□□□ -2.37
VBP1-203ENST00000535916 DEFB131BA0A096LNP1 70 aa0.23□□□□□ -2.37
VBP1-203ENST00000535916 ATXN8Q156A1 80 aa0.23□□□□□ -2.37
VBP1-203ENST00000535916 PRO3102Q9H379 93 aa0.23□□□□□ -2.37
VBP1-203ENST00000535916 TNXBP22105 4242 aa0.22□□□□□ -2.37
VBP1-203ENST00000535916 OTOGQ6ZRI0 2925 aa0.22□□□□□ -2.37
VBP1-203ENST00000535916 C3orf79P0CE67 100 aa0.22□□□□□ -2.37
VBP1-203ENST00000535916 SPRR2DP22532 72 aa0.22□□□□□ -2.37
VBP1-203ENST00000535916 UBL5Q9BZL1 73 aa0.22□□□□□ -2.37
VBP1-203ENST00000535916 ZNF292O60281 2723 aa0.22□□□□□ -2.37
VBP1-203ENST00000535916 CSMD3Q7Z407 3707 aa0.22□□□□□ -2.37
VBP1-203ENST00000535916 LINC00158P58513 81 aa0.21□□□□□ -2.38
VBP1-203ENST00000535916 COL7A1Q02388 2944 aa0.21□□□□□ -2.38
VBP1-203ENST00000535916 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP0.21□□□□□ -2.383e-6■■■□□ 18.6
VBP1-203ENST00000535916 F8P00451 2351 aa0.2□□□□□ -2.38
VBP1-203ENST00000535916 ABCA6Q8N139 1617 aa0.2□□□□□ -2.38
VBP1-203ENST00000535916 VWFP04275 2813 aa0.2□□□□□ -2.38
VBP1-203ENST00000535916 ABCC6O95255 1503 aa0.2□□□□□ -2.38
VBP1-203ENST00000535916 SMIM31A0A1B0GVY4 71 aa0.2□□□□□ -2.38
VBP1-203ENST00000535916 LOC730098B7Z3J9 87 aa0.2□□□□□ -2.38
VBP1-203ENST00000535916 LYNX1G3V0Z9 82 aa0.2□□□□□ -2.38
VBP1-203ENST00000535916 M0R2T5 61 aa0.2□□□□□ -2.38
VBP1-203ENST00000535916 GLI2P10070 1586 aa0.19□□□□□ -2.38
VBP1-203ENST00000535916 TIAM1Q13009 1591 aa0.19□□□□□ -2.38
VBP1-203ENST00000535916 A0A087WWC5 75 aa0.19□□□□□ -2.38
VBP1-203ENST00000535916 FSIP2Q5CZC0 6907 aa0.19□□□□□ -2.38
VBP1-203ENST00000535916 DOPEY2Q9Y3R5 2298 aa0.18□□□□□ -2.38
VBP1-203ENST00000535916 FAT4Q6V0I7 4981 aa0.18□□□□□ -2.38
VBP1-203ENST00000535916 ANK2Q01484 3957 aa0.18□□□□□ -2.38
VBP1-203ENST00000535916 MRPL33O75394 65 aaKnown RBP0.18□□□□□ -2.38
VBP1-203ENST00000535916 GNG13Q9P2W3 67 aa0.18□□□□□ -2.38
VBP1-203ENST00000535916 KIAA0586Q9BVV6 1533 aa0.18□□□□□ -2.38
VBP1-203ENST00000535916 DEFB135Q30KP9 77 aa0.17□□□□□ -2.38
VBP1-203ENST00000535916 DEFB114Q30KQ6 69 aa0.17□□□□□ -2.38
VBP1-203ENST00000535916 WNK2Q9Y3S1 2297 aa0.16□□□□□ -2.38
VBP1-203ENST00000535916 NSD1Q96L73 2696 aaPredicted RBP0.16□□□□□ -2.38
VBP1-203ENST00000535916 ZFYVE26Q68DK2 2539 aa0.16□□□□□ -2.38
VBP1-203ENST00000535916 SYNE2Q8WXH0 6885 aaKnown RBP0.16□□□□□ -2.38
VBP1-203ENST00000535916 IGF2RP11717 2491 aa0.16□□□□□ -2.38
VBP1-203ENST00000535916 PKDREJQ9NTG1 2253 aa0.16□□□□□ -2.38
VBP1-203ENST00000535916 LY75O60449 1722 aa0.16□□□□□ -2.38
VBP1-203ENST00000535916 ITSN2Q9NZM3 1697 aa0.15□□□□□ -2.39
VBP1-203ENST00000535916 SYNE1Q8NF91 8797 aaKnown RBP0.15□□□□□ -2.39
VBP1-203ENST00000535916 SPTBN1Q01082 2364 aaKnown RBP0.15□□□□□ -2.39
VBP1-203ENST00000535916 ETDCA0A1B0GVM5 59 aa0.15□□□□□ -2.39
VBP1-203ENST00000535916 CRIP1P50238 77 aa0.15□□□□□ -2.39
VBP1-203ENST00000535916 UNC79Q9P2D8 2635 aa0.15□□□□□ -2.39
VBP1-203ENST00000535916 DMBT1Q9UGM3 2413 aaPredicted RBP0.14□□□□□ -2.39
VBP1-203ENST00000535916 SPRR2GQ9BYE4 73 aa0.14□□□□□ -2.39
VBP1-203ENST00000535916 HRNRQ86YZ3 2850 aaPredicted RBP0.14□□□□□ -2.39
VBP1-203ENST00000535916 AKAP6Q13023 2319 aa0.14□□□□□ -2.39
VBP1-203ENST00000535916 GVINP1Q7Z2Y8 2422 aa0.14□□□□□ -2.39
VBP1-203ENST00000535916 LINC01549A6NIU2 74 aa0.13□□□□□ -2.39
VBP1-203ENST00000535916 DEFB130BP0DP73 79 aa0.13□□□□□ -2.39
VBP1-203ENST00000535916 DEFB130AP0DP74 79 aa0.13□□□□□ -2.39
VBP1-203ENST00000535916 IAPPP10997 89 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms