RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 PLA2G1BP04054 148 aaKnown RBP5.56□□□□□ -1.52
SFSWAP-202ENST00000535202 PRSS2P07478 247 aa5.56□□□□□ -1.52
SFSWAP-202ENST00000535202 FAM236CP0DP71 79 aa5.56□□□□□ -1.52
SFSWAP-202ENST00000535202 SEC61GP60059 68 aa5.56□□□□□ -1.52
SFSWAP-202ENST00000535202 TMEM243Q9BU79 118 aa5.56□□□□□ -1.52
SFSWAP-202ENST00000535202 PRR34Q9NV39 138 aa5.56□□□□□ -1.52
SFSWAP-202ENST00000535202 UBE2D4Q9Y2X8 147 aa5.56□□□□□ -1.52
SFSWAP-202ENST00000535202 V9GYY9 64 aa5.56□□□□□ -1.52
SFSWAP-202ENST00000535202 IGLV10-54A0A075B6I4 117 aa5.55□□□□□ -1.52
SFSWAP-202ENST00000535202 IGLV4-3A0A075B6K6 122 aa5.55□□□□□ -1.52
SFSWAP-202ENST00000535202 NDUFC1O43677 76 aa5.55□□□□□ -1.52
SFSWAP-202ENST00000535202 REG3AQ06141 175 aa5.55□□□□□ -1.52
SFSWAP-202ENST00000535202 IGLV4-60A0A075B6I1 120 aa5.54□□□□□ -1.52
SFSWAP-202ENST00000535202 UBE2L6O14933 153 aa5.54□□□□□ -1.52
SFSWAP-202ENST00000535202 RPL39P62891 51 aaKnown RBP5.54□□□□□ -1.52
SFSWAP-202ENST00000535202 ADAMTSL4-AS1Q5T5F5 129 aa5.54□□□□□ -1.52
SFSWAP-202ENST00000535202 CIRBP-AS1Q8TBR5 109 aa5.54□□□□□ -1.52
SFSWAP-202ENST00000535202 CYSTM1Q9H1C7 97 aa5.54□□□□□ -1.52
SFSWAP-202ENST00000535202 LAMTOR3Q9UHA4 124 aa5.54□□□□□ -1.52
SFSWAP-202ENST00000535202 C22orf24Q9Y442 160 aa5.54□□□□□ -1.52
SFSWAP-202ENST00000535202 MYCBP2O75592 4640 aa5.54□□□□□ -1.52
SFSWAP-202ENST00000535202 IGLV5-45A0A087WSX0 123 aa5.53□□□□□ -1.52
SFSWAP-202ENST00000535202 A0A0J9YXV3 536 aa5.53□□□□□ -1.52
SFSWAP-202ENST00000535202 J3QL48 77 aa5.53□□□□□ -1.52
SFSWAP-202ENST00000535202 RPL28P46779 137 aaKnown RBP5.53□□□□□ -1.52
SFSWAP-202ENST00000535202 KRTAP26-1Q6PEX3 210 aa5.53□□□□□ -1.52
SFSWAP-202ENST00000535202 LINC01561Q8N1V8 128 aa5.53□□□□□ -1.52
SFSWAP-202ENST00000535202 FLG2Q5D862 2391 aaPredicted RBP5.52□□□□□ -1.53
SFSWAP-202ENST00000535202 HERC1Q15751 4861 aa5.52□□□□□ -1.53
SFSWAP-202ENST00000535202 TRAV7A0A075B6U4 112 aa5.52□□□□□ -1.53
SFSWAP-202ENST00000535202 TRAV13-2A0A0B4J235 113 aa5.52□□□□□ -1.53
SFSWAP-202ENST00000535202 A0A1B0GUV1 79 aa5.52□□□□□ -1.53
SFSWAP-202ENST00000535202 H0YGX0 51 aa5.52□□□□□ -1.53
SFSWAP-202ENST00000535202 DGAT2L7PQ6IED9 249 aa5.52□□□□□ -1.53
SFSWAP-202ENST00000535202 LINC00308Q8TCZ7 52 aa5.52□□□□□ -1.53
SFSWAP-202ENST00000535202 IGKV3OR2-268A0A0C4DH90 116 aa5.51□□□□□ -1.53
SFSWAP-202ENST00000535202 KLKP1Q107X0 134 aa5.51□□□□□ -1.53
SFSWAP-202ENST00000535202 C9orf163Q8N9P6 203 aa5.51□□□□□ -1.53
SFSWAP-202ENST00000535202 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.5□□□□□ -1.53
SFSWAP-202ENST00000535202 IGLV5-39A0A0G2JS06 123 aa5.5□□□□□ -1.53
SFSWAP-202ENST00000535202 IGKV2-29A2NJV5 120 aaPredicted RBP5.5□□□□□ -1.53
SFSWAP-202ENST00000535202 C1orf195Q5TG92 126 aa5.5□□□□□ -1.53
SFSWAP-202ENST00000535202 FAM19A3Q7Z5A8 133 aa5.5□□□□□ -1.53
SFSWAP-202ENST00000535202 PKHD1L1Q86WI1 4243 aa5.49□□□□□ -1.53
SFSWAP-202ENST00000535202 GHRHP01286 108 aa5.49□□□□□ -1.53
SFSWAP-202ENST00000535202 XCL1P47992 114 aa5.49□□□□□ -1.53
SFSWAP-202ENST00000535202 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.49□□□□□ -1.53
SFSWAP-202ENST00000535202 DMBT1Q9UGM3 2413 aaPredicted RBP5.48□□□□□ -1.53
SFSWAP-202ENST00000535202 H7BZZ5 65 aa5.48□□□□□ -1.53
SFSWAP-202ENST00000535202 PANO1I0J062 215 aa5.48□□□□□ -1.53
SFSWAP-202ENST00000535202 CCKP06307 115 aa5.48□□□□□ -1.53
SFSWAP-202ENST00000535202 KRTAP10-4P60372 401 aaPredicted RBP5.48□□□□□ -1.53
SFSWAP-202ENST00000535202 RPL37AP61513 92 aaKnown RBP5.48□□□□□ -1.53
SFSWAP-202ENST00000535202 CNBPP62633 177 aaKnown RBP5.48□□□□□ -1.53
SFSWAP-202ENST00000535202 LINC00846Q9NV44 126 aa5.48□□□□□ -1.53
SFSWAP-202ENST00000535202 SRRM2Q9UQ35 2752 aaKnown RBP5.48□□□□□ -1.53
SFSWAP-202ENST00000535202 IGHV3-64A0A075B6Q5 118 aa5.47□□□□□ -1.53
SFSWAP-202ENST00000535202 KRTAP29-1A8MX34 341 aaPredicted RBP5.47□□□□□ -1.53
SFSWAP-202ENST00000535202 JMJD7-PLA2G4BH0Y9G9 81 aa5.47□□□□□ -1.53
SFSWAP-202ENST00000535202 SLPIP03973 132 aa5.47□□□□□ -1.53
SFSWAP-202ENST00000535202 HIGD2BQ4VC39 106 aa5.47□□□□□ -1.53
SFSWAP-202ENST00000535202 C6orf226Q5I0X4 101 aa5.47□□□□□ -1.53
SFSWAP-202ENST00000535202 C15orf56Q8N910 161 aa5.47□□□□□ -1.53
SFSWAP-202ENST00000535202 CHCHD10Q8WYQ3 142 aaPredicted RBP5.47□□□□□ -1.53
SFSWAP-202ENST00000535202 IGKV3D-7A0A0C4DH55 119 aa5.46□□□□□ -1.54
SFSWAP-202ENST00000535202 ERC2-IT1O76042 136 aa5.46□□□□□ -1.54
SFSWAP-202ENST00000535202 CHTF8P0CG12 524 aa5.46□□□□□ -1.54
SFSWAP-202ENST00000535202 FAM104AQ969W3 186 aa5.46□□□□□ -1.54
SFSWAP-202ENST00000535202 FAT3Q8TDW7 4589 aa5.46□□□□□ -1.54
SFSWAP-202ENST00000535202 LINC00167Q96N53 147 aa5.45□□□□□ -1.54
SFSWAP-202ENST00000535202 OPRPNQ99935 248 aaPredicted RBP5.45□□□□□ -1.54
SFSWAP-202ENST00000535202 FP248Q71RG6 208 aaPredicted RBP5.44□□□□□ -1.54
SFSWAP-202ENST00000535202 FAM218AQ96MZ4 157 aa5.44□□□□□ -1.54
SFSWAP-202ENST00000535202 A0A087WYN8 130 aa5.43□□□□□ -1.54
SFSWAP-202ENST00000535202 GVQW2A0A096LPI5 108 aaPredicted RBP5.43□□□□□ -1.54
SFSWAP-202ENST00000535202 LINC00959A0A1B0GUT2 108 aa5.43□□□□□ -1.54
SFSWAP-202ENST00000535202 H3BQ85 93 aa5.43□□□□□ -1.54
SFSWAP-202ENST00000535202 COX6A2Q02221 97 aa5.43□□□□□ -1.54
SFSWAP-202ENST00000535202 C20orf197Q8N268 126 aa5.43□□□□□ -1.54
SFSWAP-202ENST00000535202 SPACA4Q8TDM5 124 aa5.43□□□□□ -1.54
SFSWAP-202ENST00000535202 ZNF625Q96I27 306 aaPredicted RBP5.43□□□□□ -1.54
SFSWAP-202ENST00000535202 LRP1Q07954 4544 aaKnown RBP5.43□□□□□ -1.54
SFSWAP-202ENST00000535202 IGKV2-24A0A0C4DH68 120 aa5.42□□□□□ -1.54
SFSWAP-202ENST00000535202 SS18Q15532 418 aa5.42□□□□□ -1.54
SFSWAP-202ENST00000535202 PRR15Q8IV56 129 aa5.42□□□□□ -1.54
SFSWAP-202ENST00000535202 UBL5Q9BZL1 73 aa5.42□□□□□ -1.54
SFSWAP-202ENST00000535202 C14orf132Q9NPU4 83 aa5.42□□□□□ -1.54
SFSWAP-202ENST00000535202 CDC42SE2Q9NRR3 84 aa5.42□□□□□ -1.54
SFSWAP-202ENST00000535202 ORMDL1Q9P0S3 153 aa5.42□□□□□ -1.54
SFSWAP-202ENST00000535202 PKIGQ9Y2B9 76 aa5.42□□□□□ -1.54
SFSWAP-202ENST00000535202 A0A087WVE0 104 aa5.41□□□□□ -1.54
SFSWAP-202ENST00000535202 TRBV7-6A0A0J9YX20 115 aa5.41□□□□□ -1.54
SFSWAP-202ENST00000535202 SOSTDC1Q6X4U4 206 aa5.41□□□□□ -1.54
SFSWAP-202ENST00000535202 PDE6GP18545 87 aa5.4□□□□□ -1.54
SFSWAP-202ENST00000535202 CXCL6P80162 114 aa5.4□□□□□ -1.54
SFSWAP-202ENST00000535202 RNASE13Q5GAN3 156 aaKnown RBP5.4□□□□□ -1.54
SFSWAP-202ENST00000535202 CD164L2Q6UWJ8 174 aa5.4□□□□□ -1.54
SFSWAP-202ENST00000535202 Q6ZRU5 148 aa5.4□□□□□ -1.54
SFSWAP-202ENST00000535202 PLAC8Q9NZF1 115 aa5.4□□□□□ -1.54
SFSWAP-202ENST00000535202 CDKN2A-AS1Q9UH64 79 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms