RNA–Protein interactions for RNA: ENST00000534699.5

CSDE1-217, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CSDE1, Length 2,667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-217ENST00000534699 PET117Q6UWS5 81 aa6.04□□□□□ -1.44
CSDE1-217ENST00000534699 Q8NDZ9 215 aa6.04□□□□□ -1.44
CSDE1-217ENST00000534699 C4orf48Q5BLP8 95 aa6.04□□□□□ -1.44
CSDE1-217ENST00000534699 COPS9Q8WXC6 57 aa6.04□□□□□ -1.44
CSDE1-217ENST00000534699 SPINK1P00995 79 aa6.03□□□□□ -1.44
CSDE1-217ENST00000534699 B5MCH6 92 aa6.03□□□□□ -1.44
CSDE1-217ENST00000534699 DLEU1O43261 78 aa6.03□□□□□ -1.44
CSDE1-217ENST00000534699 IGLV6-57P01721 117 aa6.02□□□□□ -1.44
CSDE1-217ENST00000534699 SMCR5Q8TEV8 140 aa6.02□□□□□ -1.44
CSDE1-217ENST00000534699 VAMP8Q9BV40 100 aa6.02□□□□□ -1.44
CSDE1-217ENST00000534699 HIGD2AQ9BW72 106 aa6.02□□□□□ -1.44
CSDE1-217ENST00000534699 TRBV10-3A0A0K0K1G6 114 aa6.02□□□□□ -1.45
CSDE1-217ENST00000534699 HINT1P49773 126 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-217ENST00000534699 LINC01545Q5VT33 79 aa6.01□□□□□ -1.45
CSDE1-217ENST00000534699 SYS1-DBNDD2H3BUS1 97 aa6.01□□□□□ -1.45
CSDE1-217ENST00000534699 NCR3O14931 201 aa6.01□□□□□ -1.45
CSDE1-217ENST00000534699 TSPEAR-AS2P59090 65 aa6.01□□□□□ -1.45
CSDE1-217ENST00000534699 COL5A1-AS1Q5SY13 56 aa6.01□□□□□ -1.45
CSDE1-217ENST00000534699 SLC25A34Q6PIV7 304 aa6.01□□□□□ -1.45
CSDE1-217ENST00000534699 Q6ZRX8 168 aa6.01□□□□□ -1.45
CSDE1-217ENST00000534699 TSPAN13O95857 204 aa6□□□□□ -1.45
CSDE1-217ENST00000534699 S100A7L2Q5SY68 101 aa6□□□□□ -1.45
CSDE1-217ENST00000534699 Q6ZVH6 145 aa6□□□□□ -1.45
CSDE1-217ENST00000534699 A0A0U1RRA0 63 aa5.99□□□□□ -1.45
CSDE1-217ENST00000534699 SPANXCQ9NY87 97 aa5.99□□□□□ -1.45
CSDE1-217ENST00000534699 UQCR10Q9UDW1 63 aa5.99□□□□□ -1.45
CSDE1-217ENST00000534699 IGLV7-46A0A075B6I9 117 aa5.98□□□□□ -1.45
CSDE1-217ENST00000534699 TRBV7-6A0A0J9YX20 115 aa5.98□□□□□ -1.45
CSDE1-217ENST00000534699 C20orf202A1L168 122 aa5.98□□□□□ -1.45
CSDE1-217ENST00000534699 SPANXDQ9BXN6 97 aa5.98□□□□□ -1.45
CSDE1-217ENST00000534699 TRAV23DV6A0A075B6W5 121 aa5.98□□□□□ -1.45
CSDE1-217ENST00000534699 H0Y8G0 127 aa5.98□□□□□ -1.45
CSDE1-217ENST00000534699 DHRS4-AS1Q9P1J3 65 aa5.98□□□□□ -1.45
CSDE1-217ENST00000534699 PAM16Q9Y3D7 125 aa5.98□□□□□ -1.45
CSDE1-217ENST00000534699 SPRR1BP22528 89 aa5.97□□□□□ -1.45
CSDE1-217ENST00000534699 IFITM1P13164 125 aa5.97□□□□□ -1.45
CSDE1-217ENST00000534699 C3orf22Q8N5N4 141 aa5.97□□□□□ -1.45
CSDE1-217ENST00000534699 ANAPC11Q9NYG5 84 aa5.97□□□□□ -1.45
CSDE1-217ENST00000534699 KRTDAPP60985 99 aa5.96□□□□□ -1.45
CSDE1-217ENST00000534699 SPATA45Q537H7 98 aa5.96□□□□□ -1.45
CSDE1-217ENST00000534699 SLC25A20O43772 301 aa5.96□□□□□ -1.46
CSDE1-217ENST00000534699 ZNF73O43830 326 aaPredicted RBP5.95□□□□□ -1.46
CSDE1-217ENST00000534699 Q8NBF4 154 aa5.95□□□□□ -1.46
CSDE1-217ENST00000534699 LINC00308Q8TCZ7 52 aa5.94□□□□□ -1.46
CSDE1-217ENST00000534699 C3orf79P0CE67 100 aa5.94□□□□□ -1.46
CSDE1-217ENST00000534699 LITAFQ99732 161 aa5.94□□□□□ -1.46
CSDE1-217ENST00000534699 BATFQ16520 125 aa5.93□□□□□ -1.46
CSDE1-217ENST00000534699 Q9BRP9 147 aa5.93□□□□□ -1.46
CSDE1-217ENST00000534699 CDIP1Q9H305 208 aa5.93□□□□□ -1.46
CSDE1-217ENST00000534699 A4D1N5 150 aa5.92□□□□□ -1.46
CSDE1-217ENST00000534699 CD164Q04900 197 aa5.92□□□□□ -1.46
CSDE1-217ENST00000534699 SOSTDC1Q6X4U4 206 aa5.92□□□□□ -1.46
CSDE1-217ENST00000534699 ZNF815PA8K554 130 aa5.92□□□□□ -1.46
CSDE1-217ENST00000534699 SVIPQ8NHG7 77 aa5.92□□□□□ -1.46
CSDE1-217ENST00000534699 ADAMTSL4-AS1Q5T5F5 129 aa5.92□□□□□ -1.46
CSDE1-217ENST00000534699 GAGE2AQ6NT46 116 aa5.92□□□□□ -1.46
CSDE1-217ENST00000534699 DAND5Q8N907 189 aa5.91□□□□□ -1.46
CSDE1-217ENST00000534699 PMCHL2Q9BQD1 86 aa5.91□□□□□ -1.46
CSDE1-217ENST00000534699 LIMD2Q9BT23 127 aa5.91□□□□□ -1.46
CSDE1-217ENST00000534699 UBE2V1Q13404 147 aa5.91□□□□□ -1.46
CSDE1-217ENST00000534699 LAMTOR3Q9UHA4 124 aa5.9□□□□□ -1.46
CSDE1-217ENST00000534699 A0A1B0GWB2 263 aa5.9□□□□□ -1.47
CSDE1-217ENST00000534699 ELOF1P60002 83 aaKnown RBP5.9□□□□□ -1.47
CSDE1-217ENST00000534699 Q8N377 158 aa5.9□□□□□ -1.47
CSDE1-217ENST00000534699 NHP2Q9NX24 153 aaKnown RBP5.9□□□□□ -1.47
CSDE1-217ENST00000534699 LRP2P98164 4655 aa5.89□□□□□ -1.47
CSDE1-217ENST00000534699 COX7BP24311 80 aa5.89□□□□□ -1.47
CSDE1-217ENST00000534699 KRTAP13-3Q3SY46 172 aa5.89□□□□□ -1.47
CSDE1-217ENST00000534699 ERC2-IT1O76042 136 aa5.89□□□□□ -1.47
CSDE1-217ENST00000534699 MOBPQ13875 183 aa5.89□□□□□ -1.47
CSDE1-217ENST00000534699 ASB16-AS1Q495Z4 193 aa5.89□□□□□ -1.47
CSDE1-217ENST00000534699 SEC61BP60468 96 aaKnown RBP5.88□□□□□ -1.47
CSDE1-217ENST00000534699 Q5XG85 94 aa5.88□□□□□ -1.47
CSDE1-217ENST00000534699 UBR4Q5T4S7 5183 aa5.88□□□□□ -1.47
CSDE1-217ENST00000534699 OR13C6PQ8NH95 151 aa5.87□□□□□ -1.47
CSDE1-217ENST00000534699 TRAV13-2A0A0B4J235 113 aa5.87□□□□□ -1.47
CSDE1-217ENST00000534699 SCGB1D4Q6XE38 83 aa5.86□□□□□ -1.47
CSDE1-217ENST00000534699 RETNLBQ9BQ08 111 aa5.86□□□□□ -1.47
CSDE1-217ENST00000534699 IGLV9-49A0A0B4J1Y8 123 aa5.85□□□□□ -1.47
CSDE1-217ENST00000534699 TEX49A0A1B0GTD5 131 aa5.85□□□□□ -1.47
CSDE1-217ENST00000534699 HSBP1L1C9JCN9 74 aa5.85□□□□□ -1.47
CSDE1-217ENST00000534699 C9orf153Q5TBE3 101 aa5.85□□□□□ -1.47
CSDE1-217ENST00000534699 ATOH7Q8N100 152 aa5.85□□□□□ -1.47
CSDE1-217ENST00000534699 IGLV5-48A0A075B6I7 105 aa5.84□□□□□ -1.47
CSDE1-217ENST00000534699 TMEM238LA0A1B0GVL6 79 aa5.84□□□□□ -1.47
CSDE1-217ENST00000534699 XP32Q5T750 250 aa5.84□□□□□ -1.47
CSDE1-217ENST00000534699 MUC17Q685J3 4493 aa5.83□□□□□ -1.48
CSDE1-217ENST00000534699 EIF4EBP3O60516 100 aaPredicted RBP5.83□□□□□ -1.48
CSDE1-217ENST00000534699 NPC2P61916 151 aa5.82□□□□□ -1.48
CSDE1-217ENST00000534699 VAMP3Q15836 100 aa5.82□□□□□ -1.48
CSDE1-217ENST00000534699 C6orf99Q4VX62 202 aa5.82□□□□□ -1.48
CSDE1-217ENST00000534699 BVES-AS1Q5T3Y7 98 aa5.82□□□□□ -1.48
CSDE1-217ENST00000534699 TAL2Q16559 108 aa5.82□□□□□ -1.48
CSDE1-217ENST00000534699 PPDPFLQ8WWR9 84 aa5.82□□□□□ -1.48
CSDE1-217ENST00000534699 TAX1BP3O14907 124 aa5.81□□□□□ -1.48
CSDE1-217ENST00000534699 RNF213Q63HN8 5207 aa5.81□□□□□ -1.48
CSDE1-217ENST00000534699 COX8AP10176 69 aa5.8□□□□□ -1.48
CSDE1-217ENST00000534699 LCE2AQ5TA79 106 aaPredicted RBP5.8□□□□□ -1.48
CSDE1-217ENST00000534699 H7C2G1 150 aa5.8□□□□□ -1.48
CSDE1-217ENST00000534699 ST20-AS1Q8NBB2 130 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 307.7 ms