RNA–Protein interactions for RNA: ENST00000533115.5

SSSCA1-207, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-207ENST00000533115 Q6ZRX8 168 aa17.51■□□□□ 0.39
SSSCA1-207ENST00000533115 TTTY13Q9BZ97 58 aa17.51■□□□□ 0.39
SSSCA1-207ENST00000533115 C20orf202A1L168 122 aa17.49■□□□□ 0.39
SSSCA1-207ENST00000533115 LINC00483Q53H64 154 aa17.49■□□□□ 0.39
SSSCA1-207ENST00000533115 Q9BRP9 147 aa17.49■□□□□ 0.39
SSSCA1-207ENST00000533115 SPANXCQ9NY87 97 aa17.49■□□□□ 0.39
SSSCA1-207ENST00000533115 ERC2-IT1O76042 136 aa17.48■□□□□ 0.39
SSSCA1-207ENST00000533115 RETNLBQ9BQ08 111 aa17.48■□□□□ 0.39
SSSCA1-207ENST00000533115 ZNF73O43830 326 aaPredicted RBP17.46■□□□□ 0.39
SSSCA1-207ENST00000533115 GAGE2AQ6NT46 116 aa17.46■□□□□ 0.39
SSSCA1-207ENST00000533115 SPAG11AQ6PDA7 123 aa17.46■□□□□ 0.39
SSSCA1-207ENST00000533115 JOSD1Q15040 202 aaPredicted RBP17.44■□□□□ 0.38
SSSCA1-207ENST00000533115 CBY1Q9Y3M2 126 aa17.44■□□□□ 0.38
SSSCA1-207ENST00000533115 ANKRD39Q53RE8 183 aa17.41■□□□□ 0.38
SSSCA1-207ENST00000533115 C4orf48Q5BLP8 95 aa17.4■□□□□ 0.38
SSSCA1-207ENST00000533115 ATOH7Q8N100 152 aa17.4■□□□□ 0.38
SSSCA1-207ENST00000533115 Q8NBF4 154 aa17.4■□□□□ 0.38
SSSCA1-207ENST00000533115 OR13C6PQ8NH95 151 aa17.4■□□□□ 0.38
SSSCA1-207ENST00000533115 AKR1D1P51857 326 aa17.38■□□□□ 0.37
SSSCA1-207ENST00000533115 SCGB1D4Q6XE38 83 aa17.38■□□□□ 0.37
SSSCA1-207ENST00000533115 HINT1P49773 126 aaPredicted RBP17.37■□□□□ 0.37
SSSCA1-207ENST00000533115 S100A1P23297 94 aa17.36■□□□□ 0.37
SSSCA1-207ENST00000533115 SPANXDQ9BXN6 97 aa17.36■□□□□ 0.37
SSSCA1-207ENST00000533115 LINC00518Q8N0U6 118 aa17.34■□□□□ 0.37
SSSCA1-207ENST00000533115 IGLV9-49A0A0B4J1Y8 123 aa17.33■□□□□ 0.36
SSSCA1-207ENST00000533115 MOBPQ13875 183 aa17.32■□□□□ 0.36
SSSCA1-207ENST00000533115 IGLV7-46A0A075B6I9 117 aa17.31■□□□□ 0.36
SSSCA1-207ENST00000533115 SSBP3-AS1Q7Z2R9 100 aa17.3■□□□□ 0.36
SSSCA1-207ENST00000533115 HIST3H2BBQ8N257 126 aa17.3■□□□□ 0.36
SSSCA1-207ENST00000533115 PCP2Q8IVA1 136 aa17.29■□□□□ 0.36
SSSCA1-207ENST00000533115 SPINK1P00995 79 aa17.28■□□□□ 0.36
SSSCA1-207ENST00000533115 ST20-AS1Q8NBB2 130 aa17.28■□□□□ 0.36
SSSCA1-207ENST00000533115 COPS9Q8WXC6 57 aa17.28■□□□□ 0.36
SSSCA1-207ENST00000533115 C5orf52A6NGY3 159 aa17.27■□□□□ 0.36
SSSCA1-207ENST00000533115 IFITM1P13164 125 aa17.27■□□□□ 0.36
SSSCA1-207ENST00000533115 TPRXLQ17RH7 258 aa17.27■□□□□ 0.36
SSSCA1-207ENST00000533115 HIST1H2BLQ99880 126 aa17.27■□□□□ 0.36
SSSCA1-207ENST00000533115 S100A2P29034 98 aa17.26■□□□□ 0.35
SSSCA1-207ENST00000533115 SNRPEP62304 92 aaKnown RBP17.26■□□□□ 0.35
SSSCA1-207ENST00000533115 Q6ZVH6 145 aa17.26■□□□□ 0.35
SSSCA1-207ENST00000533115 DHRS4-AS1Q9P1J3 65 aa17.24■□□□□ 0.35
SSSCA1-207ENST00000533115 MUC2Q02817 5179 aa17.22■□□□□ 0.35
SSSCA1-207ENST00000533115 COX7BP24311 80 aa17.21■□□□□ 0.35
SSSCA1-207ENST00000533115 ELOF1P60002 83 aaKnown RBP17.21■□□□□ 0.35
SSSCA1-207ENST00000533115 C6orf99Q4VX62 202 aa17.21■□□□□ 0.35
SSSCA1-207ENST00000533115 FP248Q71RG6 208 aaPredicted RBP17.21■□□□□ 0.35
SSSCA1-207ENST00000533115 MUSTN1Q8IVN3 82 aa17.21■□□□□ 0.35
SSSCA1-207ENST00000533115 CDIP1Q9H305 208 aa17.21■□□□□ 0.35
SSSCA1-207ENST00000533115 C9orf153Q5TBE3 101 aa17.19■□□□□ 0.34
SSSCA1-207ENST00000533115 S100A6P06703 90 aa17.18■□□□□ 0.34
SSSCA1-207ENST00000533115 RPS29P62273 56 aaKnown RBP17.17■□□□□ 0.34
SSSCA1-207ENST00000533115 SPRR1BP22528 89 aa17.15■□□□□ 0.34
SSSCA1-207ENST00000533115 A6NDN8 102 aa17.14■□□□□ 0.33
SSSCA1-207ENST00000533115 TRBV7-6A0A0J9YX20 115 aa17.13■□□□□ 0.33
SSSCA1-207ENST00000533115 HSBP1L1C9JCN9 74 aa17.12■□□□□ 0.33
SSSCA1-207ENST00000533115 SLC25A34Q6PIV7 304 aa17.11■□□□□ 0.33
SSSCA1-207ENST00000533115 Q8N377 158 aa17.1■□□□□ 0.33
SSSCA1-207ENST00000533115 A0A1B0GWB2 263 aa17.08■□□□□ 0.32
SSSCA1-207ENST00000533115 MUC17Q685J3 4493 aa17.08■□□□□ 0.32
SSSCA1-207ENST00000533115 TRAV13-2A0A0B4J235 113 aa17.06■□□□□ 0.32
SSSCA1-207ENST00000533115 LAMTOR3Q9UHA4 124 aa17.06■□□□□ 0.32
SSSCA1-207ENST00000533115 SLC25A20O43772 301 aa17.05■□□□□ 0.32
SSSCA1-207ENST00000533115 TAL2Q16559 108 aa17.04■□□□□ 0.32
SSSCA1-207ENST00000533115 KRTAP13-3Q3SY46 172 aa17.03■□□□□ 0.32
SSSCA1-207ENST00000533115 DEFB105AQ8NG35 78 aa17.02■□□□□ 0.32
SSSCA1-207ENST00000533115 SCGB1D1O95968 90 aa17■□□□□ 0.31
SSSCA1-207ENST00000533115 SMIM11BQ8TCY0 68 aa17■□□□□ 0.31
SSSCA1-207ENST00000533115 TEX49A0A1B0GTD5 131 aa16.99■□□□□ 0.31
SSSCA1-207ENST00000533115 A4D1N5 150 aa16.98■□□□□ 0.31
SSSCA1-207ENST00000533115 A0A0U1RQV1 116 aa16.96■□□□□ 0.31
SSSCA1-207ENST00000533115 Q1RN00 199 aa16.96■□□□□ 0.31
SSSCA1-207ENST00000533115 LINC01547P58512 204 aaPredicted RBP16.93■□□□□ 0.3
SSSCA1-207ENST00000533115 IGLV5-48A0A075B6I7 105 aa16.92■□□□□ 0.3
SSSCA1-207ENST00000533115 HRCT1Q6UXD1 115 aa16.92■□□□□ 0.3
SSSCA1-207ENST00000533115 NHP2Q9NX24 153 aaKnown RBP16.92■□□□□ 0.3
SSSCA1-207ENST00000533115 SMIM29Q86T20 159 aa16.91■□□□□ 0.3
SSSCA1-207ENST00000533115 LIMD2Q9BT23 127 aa16.89■□□□□ 0.29
SSSCA1-207ENST00000533115 PRO1933Q9H354 126 aa16.89■□□□□ 0.29
SSSCA1-207ENST00000533115 COX8AP10176 69 aa16.87■□□□□ 0.29
SSSCA1-207ENST00000533115 VAMP3Q15836 100 aa16.87■□□□□ 0.29
SSSCA1-207ENST00000533115 HIST1H4GQ99525 98 aa16.85■□□□□ 0.29
SSSCA1-207ENST00000533115 CD164Q04900 197 aa16.84■□□□□ 0.29
SSSCA1-207ENST00000533115 DLEU1O43261 78 aa16.81■□□□□ 0.28
SSSCA1-207ENST00000533115 LINC00575Q6W349 94 aa16.8■□□□□ 0.28
SSSCA1-207ENST00000533115 H7C2G1 150 aa16.79■□□□□ 0.28
SSSCA1-207ENST00000533115 ASB16-AS1Q495Z4 193 aa16.79■□□□□ 0.28
SSSCA1-207ENST00000533115 C12orf57Q99622 126 aa16.79■□□□□ 0.28
SSSCA1-207ENST00000533115 FAT4Q6V0I7 4981 aa16.77■□□□□ 0.28
SSSCA1-207ENST00000533115 C14orf144Q96I85 54 aa16.75■□□□□ 0.27
SSSCA1-207ENST00000533115 hADV29S1A0JD25 119 aa16.74■□□□□ 0.27
SSSCA1-207ENST00000533115 SEC61BP60468 96 aaKnown RBP16.73■□□□□ 0.27
SSSCA1-207ENST00000533115 PAM16Q9Y3D7 125 aa16.73■□□□□ 0.27
SSSCA1-207ENST00000533115 A0A0G2JQZ4 141 aa16.72■□□□□ 0.27
SSSCA1-207ENST00000533115 SPATA45Q537H7 98 aa16.72■□□□□ 0.27
SSSCA1-207ENST00000533115 XP32Q5T750 250 aa16.71■□□□□ 0.27
SSSCA1-207ENST00000533115 Q6ZQY7 126 aa16.71■□□□□ 0.27
SSSCA1-207ENST00000533115 Q5XG85 94 aa16.7■□□□□ 0.26
SSSCA1-207ENST00000533115 BVES-AS1Q5T3Y7 98 aa16.68■□□□□ 0.26
SSSCA1-207ENST00000533115 VAMP8Q9BV40 100 aa16.68■□□□□ 0.26
SSSCA1-207ENST00000533115 HIGD1BQ9P298 99 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms