RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 LINC00474Q9P2X8 69 aa8.01□□□□□ -1.13
CHD7-211ENST00000532149 PRYO14603 147 aa8□□□□□ -1.13
CHD7-211ENST00000532149 DYNC2H1Q8NCM8 4307 aaKnown RBP7.99□□□□□ -1.13
CHD7-211ENST00000532149 STAB2Q8WWQ8 2551 aa7.99□□□□□ -1.13
CHD7-211ENST00000532149 Q8NDZ9 215 aa7.99□□□□□ -1.13
CHD7-211ENST00000532149 C16orf90A8MZG2 172 aa7.98□□□□□ -1.13
CHD7-211ENST00000532149 C9orf129Q5T035 196 aaKnown RBP7.98□□□□□ -1.13
CHD7-211ENST00000532149 CDIP1Q9H305 208 aa7.98□□□□□ -1.13
CHD7-211ENST00000532149 DHRS4-AS1Q9P1J3 65 aa7.98□□□□□ -1.13
CHD7-211ENST00000532149 COL7A1Q02388 2944 aa7.98□□□□□ -1.13
CHD7-211ENST00000532149 KRTAP17-1Q9BYP8 105 aa7.97□□□□□ -1.13
CHD7-211ENST00000532149 SLPIP03973 132 aa7.96□□□□□ -1.14
CHD7-211ENST00000532149 Q6Q795 121 aa7.96□□□□□ -1.14
CHD7-211ENST00000532149 IMUPQ9GZP8 106 aa7.96□□□□□ -1.14
CHD7-211ENST00000532149 C22orf24Q9Y442 160 aa7.95□□□□□ -1.14
CHD7-211ENST00000532149 IGLV1-50A0A075B6I6 118 aa7.94□□□□□ -1.14
CHD7-211ENST00000532149 SDIM1Q6ZPB5 146 aa7.94□□□□□ -1.14
CHD7-211ENST00000532149 MRPL55Q7Z7F7 128 aaKnown RBP7.94□□□□□ -1.14
CHD7-211ENST00000532149 LINC00643Q86TS7 51 aa7.94□□□□□ -1.14
CHD7-211ENST00000532149 CCKP06307 115 aa7.93□□□□□ -1.14
CHD7-211ENST00000532149 SPRR1AP35321 89 aa7.93□□□□□ -1.14
CHD7-211ENST00000532149 RBM3P98179 157 aaKnown RBP7.93□□□□□ -1.14
CHD7-211ENST00000532149 GAGE2BQ13066 116 aa7.93□□□□□ -1.14
CHD7-211ENST00000532149 C9orf163Q8N9P6 203 aa7.93□□□□□ -1.14
CHD7-211ENST00000532149 C7orf33Q8WU49 177 aa7.93□□□□□ -1.14
CHD7-211ENST00000532149 LOC110117498A0A087WWA1 95 aa7.92□□□□□ -1.14
CHD7-211ENST00000532149 A0A1B0GW54 56 aa7.92□□□□□ -1.14
CHD7-211ENST00000532149 CASC10Q5T4H9 136 aa7.92□□□□□ -1.14
CHD7-211ENST00000532149 KRTAP1-5Q9BYS1 174 aa7.92□□□□□ -1.14
CHD7-211ENST00000532149 ETDCA0A1B0GVM5 59 aa7.91□□□□□ -1.14
CHD7-211ENST00000532149 PCP4P48539 62 aa7.91□□□□□ -1.14
CHD7-211ENST00000532149 Q6ZQY7 126 aa7.91□□□□□ -1.14
CHD7-211ENST00000532149 DSCR8Q96T75 97 aa7.91□□□□□ -1.14
CHD7-211ENST00000532149 LRCOL1A6NCL2 159 aa7.9□□□□□ -1.14
CHD7-211ENST00000532149 KRTAP9-7A8MTY7 169 aa7.9□□□□□ -1.14
CHD7-211ENST00000532149 SERTAD4-AS1Q5TG53 156 aa7.9□□□□□ -1.14
CHD7-211ENST00000532149 Q6ZRX8 168 aa7.9□□□□□ -1.14
CHD7-211ENST00000532149 LAMTOR3Q9UHA4 124 aa7.9□□□□□ -1.14
CHD7-211ENST00000532149 XGP55808 180 aa7.89□□□□□ -1.15
CHD7-211ENST00000532149 GAGE2AQ6NT46 116 aa7.89□□□□□ -1.15
CHD7-211ENST00000532149 Q6ZRN7 208 aaPredicted RBP7.89□□□□□ -1.15
CHD7-211ENST00000532149 DNAH1Q9P2D7 4330 aa7.89□□□□□ -1.15
CHD7-211ENST00000532149 TRBV7-7A0A0K0K1E9 115 aa7.87□□□□□ -1.15
CHD7-211ENST00000532149 B5MCH6 92 aa7.87□□□□□ -1.15
CHD7-211ENST00000532149 KRTAP4-16G5E9R7 235 aaPredicted RBP7.87□□□□□ -1.15
CHD7-211ENST00000532149 H0Y9J4 135 aa7.87□□□□□ -1.15
CHD7-211ENST00000532149 ATP5EP2Q5VTU8 51 aa7.87□□□□□ -1.15
CHD7-211ENST00000532149 REG3GQ6UW15 175 aa7.87□□□□□ -1.15
CHD7-211ENST00000532149 WWC2-AS2Q96NR7 200 aa7.87□□□□□ -1.15
CHD7-211ENST00000532149 C14orf132Q9NPU4 83 aa7.87□□□□□ -1.15
CHD7-211ENST00000532149 Q6ZR54 194 aa7.86□□□□□ -1.15
CHD7-211ENST00000532149 DNAH7Q8WXX0 4024 aa7.86□□□□□ -1.15
CHD7-211ENST00000532149 RPL37AP8A6NKH3 93 aa7.85□□□□□ -1.15
CHD7-211ENST00000532149 C3orf84H3BNL1 204 aa7.85□□□□□ -1.15
CHD7-211ENST00000532149 NDUFV3P56181 108 aaKnown RBP7.85□□□□□ -1.15
CHD7-211ENST00000532149 MT-ATP8P03928 68 aa7.84□□□□□ -1.15
CHD7-211ENST00000532149 UBL5Q9BZL1 73 aa7.84□□□□□ -1.15
CHD7-211ENST00000532149 A0A096LNI7 61 aa7.83□□□□□ -1.16
CHD7-211ENST00000532149 Q6ZQT0 140 aa7.83□□□□□ -1.16
CHD7-211ENST00000532149 FAM19A5Q7Z5A7 132 aaPredicted RBP7.83□□□□□ -1.16
CHD7-211ENST00000532149 IGLV5-48A0A075B6I7 105 aa7.82□□□□□ -1.16
CHD7-211ENST00000532149 TRBV7-4A0A0J9YYF1 115 aa7.82□□□□□ -1.16
CHD7-211ENST00000532149 EPM2AB3EWF7 344 aa7.82□□□□□ -1.16
CHD7-211ENST00000532149 C1orf134Q5TEV5 83 aa7.82□□□□□ -1.16
CHD7-211ENST00000532149 Q6JHZ5 121 aa7.82□□□□□ -1.16
CHD7-211ENST00000532149 A0A087WTM6 91 aa7.81□□□□□ -1.16
CHD7-211ENST00000532149 MEGF8Q7Z7M0 2845 aa7.81□□□□□ -1.16
CHD7-211ENST00000532149 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.8□□□□□ -1.16
CHD7-211ENST00000532149 FAM168BA1KXE4 195 aa7.8□□□□□ -1.16
CHD7-211ENST00000532149 KRTAP7-1Q8IUC3 87 aa7.8□□□□□ -1.16
CHD7-211ENST00000532149 IGKV2-24A0A0C4DH68 120 aa7.79□□□□□ -1.16
CHD7-211ENST00000532149 A0A1B0GV72 72 aa7.79□□□□□ -1.16
CHD7-211ENST00000532149 KRTAP5-3Q6L8H2 238 aa7.79□□□□□ -1.16
CHD7-211ENST00000532149 PLECQ15149 4684 aaKnown RBP7.79□□□□□ -1.16
CHD7-211ENST00000532149 UBE2BP63146 152 aa7.78□□□□□ -1.16
CHD7-211ENST00000532149 KRTAP4-11Q9BYQ6 195 aa7.78□□□□□ -1.16
CHD7-211ENST00000532149 VPS13DQ5THJ4 4388 aa7.78□□□□□ -1.16
CHD7-211ENST00000532149 KRTAP4-5Q9BYR2 181 aa7.77□□□□□ -1.17
CHD7-211ENST00000532149 LINC00846Q9NV44 126 aa7.77□□□□□ -1.17
CHD7-211ENST00000532149 CSMD3Q7Z407 3707 aa7.77□□□□□ -1.17
CHD7-211ENST00000532149 A0A1W2PNN7 141 aa7.76□□□□□ -1.17
CHD7-211ENST00000532149 KRTAP19-4Q3LI73 84 aa7.76□□□□□ -1.17
CHD7-211ENST00000532149 Q8N377 158 aa7.76□□□□□ -1.17
CHD7-211ENST00000532149 Q9BRP9 147 aa7.76□□□□□ -1.17
CHD7-211ENST00000532149 PRKDCP78527 4128 aaKnown RBP7.76□□□□□ -1.17
CHD7-211ENST00000532149 F8WEM9 126 aa7.75□□□□□ -1.17
CHD7-211ENST00000532149 FUSP35637 526 aaKnown RBP eCLIP7.75□□□□□ -1.17
CHD7-211ENST00000532149 SPACA4Q8TDM5 124 aa7.75□□□□□ -1.17
CHD7-211ENST00000532149 LINC00476Q8WZB0 136 aa7.75□□□□□ -1.17
CHD7-211ENST00000532149 DPH3Q96FX2 82 aa7.75□□□□□ -1.17
CHD7-211ENST00000532149 TENM2Q9NT68 2774 aa7.74□□□□□ -1.17
CHD7-211ENST00000532149 DNHD1Q96M86 4753 aa7.74□□□□□ -1.17
CHD7-211ENST00000532149 M0R2N4 97 aa7.74□□□□□ -1.17
CHD7-211ENST00000532149 CXCL6P80162 114 aa7.74□□□□□ -1.17
CHD7-211ENST00000532149 FAM19A1Q7Z5A9 133 aa7.74□□□□□ -1.17
CHD7-211ENST00000532149 SMCR5Q8TEV8 140 aa7.74□□□□□ -1.17
CHD7-211ENST00000532149 BCE1O60756 84 aa7.73□□□□□ -1.17
CHD7-211ENST00000532149 LINC01547P58512 204 aaPredicted RBP7.73□□□□□ -1.17
CHD7-211ENST00000532149 RTL8CO15255 209 aa7.72□□□□□ -1.17
CHD7-211ENST00000532149 LY6G6CO95867 125 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 136.1 ms