RNA–Protein interactions for RNA: ENST00000531341.1

CHKA-206, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-206ENST00000531341 NDUFC2O95298 119 aa11.21□□□□□ -0.61
CHKA-206ENST00000531341 SOSTDC1Q6X4U4 206 aa11.21□□□□□ -0.61
CHKA-206ENST00000531341 LEPROTO15243 131 aa11.2□□□□□ -0.62
CHKA-206ENST00000531341 SPRR1BP22528 89 aa11.2□□□□□ -0.62
CHKA-206ENST00000531341 KRTAP9-7A8MTY7 169 aa11.19□□□□□ -0.62
CHKA-206ENST00000531341 NPC2P61916 151 aa11.19□□□□□ -0.62
CHKA-206ENST00000531341 COX6B2Q6YFQ2 88 aa11.19□□□□□ -0.62
CHKA-206ENST00000531341 CHCHD1Q96BP2 118 aaKnown RBP11.19□□□□□ -0.62
CHKA-206ENST00000531341 MIEN1Q9BRT3 115 aa11.19□□□□□ -0.62
CHKA-206ENST00000531341 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.18□□□□□ -0.62
CHKA-206ENST00000531341 H0Y8G0 127 aa11.18□□□□□ -0.62
CHKA-206ENST00000531341 IFITM2Q01629 132 aa11.18□□□□□ -0.62
CHKA-206ENST00000531341 C5orf52A6NGY3 159 aa11.17□□□□□ -0.62
CHKA-206ENST00000531341 H7C2G1 150 aa11.16□□□□□ -0.62
CHKA-206ENST00000531341 J3QQQ9 107 aa11.16□□□□□ -0.62
CHKA-206ENST00000531341 RPL37P61927 97 aaKnown RBP11.15□□□□□ -0.62
CHKA-206ENST00000531341 ADAMTSL4-AS1Q5T5F5 129 aa11.15□□□□□ -0.62
CHKA-206ENST00000531341 COMMD7Q86VX2 200 aa11.14□□□□□ -0.63
CHKA-206ENST00000531341 LAMTOR3Q9UHA4 124 aa11.12□□□□□ -0.63
CHKA-206ENST00000531341 C1orf195Q5TG92 126 aa11.11□□□□□ -0.63
CHKA-206ENST00000531341 Q1RN00 199 aa11.1□□□□□ -0.63
CHKA-206ENST00000531341 SLC25A34Q6PIV7 304 aa11.1□□□□□ -0.63
CHKA-206ENST00000531341 HINT1P49773 126 aaPredicted RBP11.09□□□□□ -0.63
CHKA-206ENST00000531341 CD164Q04900 197 aa11.09□□□□□ -0.63
CHKA-206ENST00000531341 PMCHL2Q9BQD1 86 aa11.09□□□□□ -0.63
CHKA-206ENST00000531341 A0A0G2JQZ4 141 aa11.08□□□□□ -0.64
CHKA-206ENST00000531341 NMUP48645 174 aa11.08□□□□□ -0.64
CHKA-206ENST00000531341 A0A0J9YXY3 114 aa11.07□□□□□ -0.64
CHKA-206ENST00000531341 HSBP1O75506 76 aa11.07□□□□□ -0.64
CHKA-206ENST00000531341 LGALS3P17931 250 aaKnown RBP11.07□□□□□ -0.64
CHKA-206ENST00000531341 DHRS4-AS1Q9P1J3 65 aa11.07□□□□□ -0.64
CHKA-206ENST00000531341 DEFB105AQ8NG35 78 aa11.06□□□□□ -0.64
CHKA-206ENST00000531341 PRO1933Q9H354 126 aa11.06□□□□□ -0.64
CHKA-206ENST00000531341 PLNP26678 52 aa11.05□□□□□ -0.64
CHKA-206ENST00000531341 Q5XG85 94 aa11.05□□□□□ -0.64
CHKA-206ENST00000531341 YPEL4Q96NS1 127 aa11.05□□□□□ -0.64
CHKA-206ENST00000531341 OR13C6PQ8NH95 151 aa11.04□□□□□ -0.64
CHKA-206ENST00000531341 DPM2O94777 84 aa11.03□□□□□ -0.64
CHKA-206ENST00000531341 LINC00310P59036 64 aa11.03□□□□□ -0.64
CHKA-206ENST00000531341 TAL2Q16559 108 aa11.03□□□□□ -0.64
CHKA-206ENST00000531341 LEPROTL1O95214 131 aa11.02□□□□□ -0.65
CHKA-206ENST00000531341 HERVK_113P61574 105 aa11.02□□□□□ -0.65
CHKA-206ENST00000531341 SMIM29Q86T20 159 aa11.02□□□□□ -0.65
CHKA-206ENST00000531341 IGKCP01834 107 aa11□□□□□ -0.65
CHKA-206ENST00000531341 APOC3P02656 99 aa11□□□□□ -0.65
CHKA-206ENST00000531341 ELOF1P60002 83 aaKnown RBP11□□□□□ -0.65
CHKA-206ENST00000531341 CBY1Q9Y3M2 126 aa11□□□□□ -0.65
CHKA-206ENST00000531341 LINC00308Q8TCZ7 52 aa10.99□□□□□ -0.65
CHKA-206ENST00000531341 LITAFQ99732 161 aa10.99□□□□□ -0.65
CHKA-206ENST00000531341 SPANXCQ9NY87 97 aa10.99□□□□□ -0.65
CHKA-206ENST00000531341 TEX49A0A1B0GTD5 131 aa10.98□□□□□ -0.65
CHKA-206ENST00000531341 COX7BP24311 80 aa10.98□□□□□ -0.65
CHKA-206ENST00000531341 AKR1D1P51857 326 aa10.98□□□□□ -0.65
CHKA-206ENST00000531341 C6orf99Q4VX62 202 aa10.98□□□□□ -0.65
CHKA-206ENST00000531341 FABP4P15090 132 aa10.97□□□□□ -0.65
CHKA-206ENST00000531341 Q6Q795 121 aa10.97□□□□□ -0.65
CHKA-206ENST00000531341 FCGBPQ9Y6R7 5405 aaPredicted RBP10.97□□□□□ -0.65
CHKA-206ENST00000531341 SERF1AO75920 110 aa10.95□□□□□ -0.66
CHKA-206ENST00000531341 KRTAP9-8Q9BYQ0 159 aa10.95□□□□□ -0.66
CHKA-206ENST00000531341 SPANXDQ9BXN6 97 aa10.94□□□□□ -0.66
CHKA-206ENST00000531341 E9PLD3 99 aa10.93□□□□□ -0.66
CHKA-206ENST00000531341 SNAPINO95295 136 aa10.93□□□□□ -0.66
CHKA-206ENST00000531341 HSPB8Q9UJY1 196 aa10.91□□□□□ -0.66
CHKA-206ENST00000531341 TRGC2P03986 189 aa10.9□□□□□ -0.66
CHKA-206ENST00000531341 SVBPQ8N300 66 aa10.9□□□□□ -0.66
CHKA-206ENST00000531341 IGLV5-48A0A075B6I7 105 aa10.88□□□□□ -0.67
CHKA-206ENST00000531341 TIMM17BO60830 172 aa10.85□□□□□ -0.67
CHKA-206ENST00000531341 TTTY13Q9BZ97 58 aa10.84□□□□□ -0.67
CHKA-206ENST00000531341 TCL1BO95988 128 aa10.83□□□□□ -0.68
CHKA-206ENST00000531341 CFC1P0CG37 223 aa10.83□□□□□ -0.68
CHKA-206ENST00000531341 NDUFA5Q16718 116 aa10.83□□□□□ -0.68
CHKA-206ENST00000531341 TRBV7-6A0A0J9YX20 115 aa10.82□□□□□ -0.68
CHKA-206ENST00000531341 LINC00518Q8N0U6 118 aa10.82□□□□□ -0.68
CHKA-206ENST00000531341 ATP11AUNQ6ZP68 121 aa10.81□□□□□ -0.68
CHKA-206ENST00000531341 PCP2Q8IVA1 136 aa10.8□□□□□ -0.68
CHKA-206ENST00000531341 A0A1B0GWB2 263 aa10.79□□□□□ -0.68
CHKA-206ENST00000531341 OBSCN-AS1Q96MR7 158 aa10.79□□□□□ -0.68
CHKA-206ENST00000531341 ZNF815PA8K554 130 aa10.78□□□□□ -0.68
CHKA-206ENST00000531341 Q75L30 129 aa10.78□□□□□ -0.68
CHKA-206ENST00000531341 KRTAP19-1Q8IUB9 90 aa10.75□□□□□ -0.69
CHKA-206ENST00000531341 MACF1Q9UPN3 7388 aaKnown RBP10.74□□□□□ -0.69
CHKA-206ENST00000531341 SYS1-DBNDD2H3BUS1 97 aa10.73□□□□□ -0.69
CHKA-206ENST00000531341 C20orf202A1L168 122 aa10.72□□□□□ -0.69
CHKA-206ENST00000531341 A6NDN8 102 aa10.72□□□□□ -0.69
CHKA-206ENST00000531341 LCE2BO14633 110 aa10.72□□□□□ -0.69
CHKA-206ENST00000531341 MT2AP02795 61 aa10.72□□□□□ -0.69
CHKA-206ENST00000531341 SYNE2Q8WXH0 6885 aaKnown RBP10.71□□□□□ -0.69
CHKA-206ENST00000531341 TRBV7-7A0A0K0K1E9 115 aa10.68□□□□□ -0.7
CHKA-206ENST00000531341 LINC01545Q5VT33 79 aa10.68□□□□□ -0.7
CHKA-206ENST00000531341 A4D1N5 150 aa10.66□□□□□ -0.7
CHKA-206ENST00000531341 IGFL1Q6UW32 110 aa10.66□□□□□ -0.7
CHKA-206ENST00000531341 SMIM11BQ8TCY0 68 aa10.66□□□□□ -0.7
CHKA-206ENST00000531341 Q96NJ1 140 aa10.66□□□□□ -0.7
CHKA-206ENST00000531341 F8WEM9 126 aa10.65□□□□□ -0.7
CHKA-206ENST00000531341 MT1FP04733 61 aa10.65□□□□□ -0.7
CHKA-206ENST00000531341 MUSTN1Q8IVN3 82 aa10.64□□□□□ -0.71
CHKA-206ENST00000531341 NHP2Q9NX24 153 aaKnown RBP10.64□□□□□ -0.71
CHKA-206ENST00000531341 SCGB1D4Q6XE38 83 aa10.62□□□□□ -0.71
CHKA-206ENST00000531341 CLEC2BQ92478 149 aa10.62□□□□□ -0.71
CHKA-206ENST00000531341 KRTAP9-3Q9BYQ3 159 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms