RNA–Protein interactions for RNA: ENST00000531243.2

PABPC4-225, Transcript of poly(A) binding protein cytoplasmic 4, human

TSL 4

Gene PABPC4, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC4-225	ENST00000531243	HINT1	P49773	126 aa	Predicted RBP	13.02	□□□□□ -0.33
PABPC4-225	ENST00000531243	HNRNPA3	P51991	378 aa	Known RBP	13.02	□□□□□ -0.33
PABPC4-225	ENST00000531243	C2orf91	Q6ZV80	131 aa		13.02	□□□□□ -0.33
PABPC4-225	ENST00000531243		A4D1N5	150 aa		13.01	□□□□□ -0.33
PABPC4-225	ENST00000531243		A6NDN8	102 aa		13.01	□□□□□ -0.33
PABPC4-225	ENST00000531243	LINC00337	Q8N6G1	96 aa		13.01	□□□□□ -0.33
PABPC4-225	ENST00000531243	SPRR1A	P35321	89 aa		13	□□□□□ -0.33
PABPC4-225	ENST00000531243		H0Y9J4	135 aa		12.98	□□□□□ -0.33
PABPC4-225	ENST00000531243	TMEM238L	A0A1B0GVL6	79 aa		12.97	□□□□□ -0.33
PABPC4-225	ENST00000531243		A6NJY4	79 aa		12.97	□□□□□ -0.33
PABPC4-225	ENST00000531243	ZNF73	O43830	326 aa	Predicted RBP	12.97	□□□□□ -0.33
PABPC4-225	ENST00000531243	LCE2A	Q5TA79	106 aa	Predicted RBP	12.97	□□□□□ -0.33
PABPC4-225	ENST00000531243	PRLH	P81277	87 aa		12.96	□□□□□ -0.33
PABPC4-225	ENST00000531243	CEND1	Q8N111	149 aa		12.96	□□□□□ -0.33
PABPC4-225	ENST00000531243	SRRM2	Q9UQ35	2752 aa	Known RBP	12.95	□□□□□ -0.34
PABPC4-225	ENST00000531243	HSD52	Q0P140	79 aa		12.95	□□□□□ -0.34
PABPC4-225	ENST00000531243	KRTAP13-1	Q8IUC0	172 aa		12.94	□□□□□ -0.34
PABPC4-225	ENST00000531243	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	12.93	□□□□□ -0.34
PABPC4-225	ENST00000531243	C12orf57	Q99622	126 aa		12.93	□□□□□ -0.34
PABPC4-225	ENST00000531243	OXT	P01178	125 aa		12.92	□□□□□ -0.34
PABPC4-225	ENST00000531243	RAB37	Q96AX2	223 aa		12.92	□□□□□ -0.34
PABPC4-225	ENST00000531243	PRO1933	Q9H354	126 aa		12.92	□□□□□ -0.34
PABPC4-225	ENST00000531243	TSTD3	H0UI37	97 aa		12.91	□□□□□ -0.34
PABPC4-225	ENST00000531243	HIGD2A	Q9BW72	106 aa		12.91	□□□□□ -0.34
PABPC4-225	ENST00000531243		B5MCH6	92 aa		12.9	□□□□□ -0.34
PABPC4-225	ENST00000531243		Q6ZRX8	168 aa		12.9	□□□□□ -0.34
PABPC4-225	ENST00000531243		A0A0B4J2C4	111 aa		12.88	□□□□□ -0.35
PABPC4-225	ENST00000531243	C6orf99	Q4VX62	202 aa		12.88	□□□□□ -0.35
PABPC4-225	ENST00000531243	TRBV7-6	A0A0J9YX20	115 aa		12.87	□□□□□ -0.35
PABPC4-225	ENST00000531243	FLG2	Q5D862	2391 aa	Predicted RBP	12.87	□□□□□ -0.35
PABPC4-225	ENST00000531243	KRTAP29-1	A8MX34	341 aa	Predicted RBP	12.86	□□□□□ -0.35
PABPC4-225	ENST00000531243	CFC1B	P0CG36	223 aa		12.86	□□□□□ -0.35
PABPC4-225	ENST00000531243	CFC1	P0CG37	223 aa		12.86	□□□□□ -0.35
PABPC4-225	ENST00000531243	COX7B	P24311	80 aa		12.86	□□□□□ -0.35
PABPC4-225	ENST00000531243	RPL13A	P40429	203 aa	Known RBP	12.86	□□□□□ -0.35
PABPC4-225	ENST00000531243	ZNF706	Q9Y5V0	76 aa	Predicted RBP	12.86	□□□□□ -0.35
PABPC4-225	ENST00000531243		A0A1B0GWB2	263 aa		12.85	□□□□□ -0.35
PABPC4-225	ENST00000531243	VAMP3	Q15836	100 aa		12.85	□□□□□ -0.35
PABPC4-225	ENST00000531243	SMIM11B	Q8TCY0	68 aa		12.85	□□□□□ -0.35
PABPC4-225	ENST00000531243	FXYD2	P54710	66 aa		12.84	□□□□□ -0.35
PABPC4-225	ENST00000531243	ELOF1	P60002	83 aa	Known RBP	12.83	□□□□□ -0.36
PABPC4-225	ENST00000531243	SMCR5	Q8TEV8	140 aa		12.83	□□□□□ -0.36
PABPC4-225	ENST00000531243	LINC01600	Q96MT4	127 aa		12.83	□□□□□ -0.36
PABPC4-225	ENST00000531243	DHRS4-AS1	Q9P1J3	65 aa		12.83	□□□□□ -0.36
PABPC4-225	ENST00000531243	ABCA13	Q86UQ4	5058 aa		12.83	□□□□□ -0.36
PABPC4-225	ENST00000531243	LCE2C	Q5TA81	110 aa		12.82	□□□□□ -0.36
PABPC4-225	ENST00000531243	PRO1854	Q9UHT4	67 aa		12.81	□□□□□ -0.36
PABPC4-225	ENST00000531243	NHP2	Q9NX24	153 aa	Known RBP	12.8	□□□□□ -0.36
PABPC4-225	ENST00000531243		M0R143	59 aa		12.79	□□□□□ -0.36
PABPC4-225	ENST00000531243		Q1RN00	199 aa		12.79	□□□□□ -0.36
PABPC4-225	ENST00000531243	BVES-AS1	Q5T3Y7	98 aa		12.79	□□□□□ -0.36
PABPC4-225	ENST00000531243		Q9BRP9	147 aa		12.79	□□□□□ -0.36
PABPC4-225	ENST00000531243	PKHD1L1	Q86WI1	4243 aa		12.78	□□□□□ -0.36
PABPC4-225	ENST00000531243		H7C2G1	150 aa		12.78	□□□□□ -0.36
PABPC4-225	ENST00000531243	KRTAP1-4	P0C5Y4	121 aa		12.77	□□□□□ -0.37
PABPC4-225	ENST00000531243	CTAG1A	P78358	180 aa		12.77	□□□□□ -0.37
PABPC4-225	ENST00000531243	SLC25A20	O43772	301 aa		12.76	□□□□□ -0.37
PABPC4-225	ENST00000531243	SPRR4	Q96PI1	79 aa		12.75	□□□□□ -0.37
PABPC4-225	ENST00000531243	CRYGA	P11844	174 aa		12.74	□□□□□ -0.37
PABPC4-225	ENST00000531243	FAM229B	Q4G0N7	80 aa		12.74	□□□□□ -0.37
PABPC4-225	ENST00000531243	SNCG	O76070	127 aa		12.72	□□□□□ -0.37
PABPC4-225	ENST00000531243	ERC2-IT1	O76042	136 aa		12.71	□□□□□ -0.37
PABPC4-225	ENST00000531243		H0YGX0	51 aa		12.7	□□□□□ -0.38
PABPC4-225	ENST00000531243	GAGE2A	Q6NT46	116 aa		12.7	□□□□□ -0.38
PABPC4-225	ENST00000531243	PRR26	Q8N8Z3	221 aa		12.7	□□□□□ -0.38
PABPC4-225	ENST00000531243	PCLO	Q9Y6V0	5065 aa		12.7	□□□□□ -0.38
PABPC4-225	ENST00000531243	C4orf48	Q5BLP8	95 aa		12.69	□□□□□ -0.38
PABPC4-225	ENST00000531243		K7ERJ3	54 aa		12.67	□□□□□ -0.38
PABPC4-225	ENST00000531243	KRTAP10-8	P60410	259 aa		12.67	□□□□□ -0.38
PABPC4-225	ENST00000531243	LINC00575	Q6W349	94 aa		12.67	□□□□□ -0.38
PABPC4-225	ENST00000531243	hADV29S1	A0JD25	119 aa		12.66	□□□□□ -0.38
PABPC4-225	ENST00000531243	COX6C	P09669	75 aa		12.66	□□□□□ -0.38
PABPC4-225	ENST00000531243	LINC00483	Q53H64	154 aa		12.66	□□□□□ -0.38
PABPC4-225	ENST00000531243	ANAPC11	Q9NYG5	84 aa		12.66	□□□□□ -0.38
PABPC4-225	ENST00000531243	PSMB2	P49721	201 aa		12.65	□□□□□ -0.38
PABPC4-225	ENST00000531243	MT1HL1	P0DM35	61 aa		12.64	□□□□□ -0.39
PABPC4-225	ENST00000531243	TYMSOS	Q8TAI1	123 aa		12.64	□□□□□ -0.39
PABPC4-225	ENST00000531243		A0A087X002	238 aa		12.63	□□□□□ -0.39
PABPC4-225	ENST00000531243	ST20-AS1	Q8NBB2	130 aa		12.63	□□□□□ -0.39
PABPC4-225	ENST00000531243	MYCBP2	O75592	4640 aa		12.61	□□□□□ -0.39
PABPC4-225	ENST00000531243	TEX49	A0A1B0GTD5	131 aa		12.61	□□□□□ -0.39
PABPC4-225	ENST00000531243	TSPAN13	O95857	204 aa		12.61	□□□□□ -0.39
PABPC4-225	ENST00000531243	TRIAP1	O43715	76 aa		12.6	□□□□□ -0.39
PABPC4-225	ENST00000531243	SPRR1B	P22528	89 aa		12.6	□□□□□ -0.39
PABPC4-225	ENST00000531243	DEFB105A	Q8NG35	78 aa		12.6	□□□□□ -0.39
PABPC4-225	ENST00000531243	LRP1	Q07954	4544 aa	Known RBP	12.6	□□□□□ -0.39
PABPC4-225	ENST00000531243		A0A1B0GX51	115 aa		12.59	□□□□□ -0.39
PABPC4-225	ENST00000531243	BATF	Q16520	125 aa		12.59	□□□□□ -0.39
PABPC4-225	ENST00000531243	FAT3	Q8TDW7	4589 aa		12.58	□□□□□ -0.4
PABPC4-225	ENST00000531243	UNQ6493/PRO21345	Q6UXR8	122 aa	Predicted RBP	12.58	□□□□□ -0.4
PABPC4-225	ENST00000531243	LAMTOR3	Q9UHA4	124 aa		12.58	□□□□□ -0.4
PABPC4-225	ENST00000531243	GHRH	P01286	108 aa		12.57	□□□□□ -0.4
PABPC4-225	ENST00000531243	KRTAP13-2	Q52LG2	175 aa		12.57	□□□□□ -0.4
PABPC4-225	ENST00000531243		Q6ZQY7	126 aa		12.56	□□□□□ -0.4
PABPC4-225	ENST00000531243	DMBT1	Q9UGM3	2413 aa	Predicted RBP	12.56	□□□□□ -0.4
PABPC4-225	ENST00000531243	IGLV5-48	A0A075B6I7	105 aa		12.55	□□□□□ -0.4
PABPC4-225	ENST00000531243	SCGB1C2	P0DMR2	95 aa		12.55	□□□□□ -0.4
PABPC4-225	ENST00000531243	OCIAD2	Q56VL3	154 aa		12.55	□□□□□ -0.4
PABPC4-225	ENST00000531243	IGLV9-49	A0A0B4J1Y8	123 aa		12.54	□□□□□ -0.4
PABPC4-225	ENST00000531243	C3orf22	Q8N5N4	141 aa		12.54	□□□□□ -0.4

Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms