RNA–Protein interactions for RNA: ENST00000528429.5

SOX6-211, Transcript of SRY-box 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SOX6, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-211ENST00000528429 LCA10Q71F78 164 aa5.15□□□□□ -1.58
SOX6-211ENST00000528429 IBA57-AS1B1ANH7 110 aa5.15□□□□□ -1.59
SOX6-211ENST00000528429 TNP2Q05952 138 aa5.15□□□□□ -1.59
SOX6-211ENST00000528429 UBE2DNLQ8IWF7 75 aa5.15□□□□□ -1.59
SOX6-211ENST00000528429 PRKDCP78527 4128 aaKnown RBP5.14□□□□□ -1.59
SOX6-211ENST00000528429 FUSP35637 526 aaKnown RBP eCLIP5.14□□□□□ -1.59
SOX6-211ENST00000528429 UNQ6190/PRO20217Q6UXQ8 127 aa5.14□□□□□ -1.59
SOX6-211ENST00000528429 C10orf25Q5T742 122 aa5.14□□□□□ -1.59
SOX6-211ENST00000528429 ZNF706Q9Y5V0 76 aaPredicted RBP5.14□□□□□ -1.59
SOX6-211ENST00000528429 PHF5AQ7RTV0 110 aaKnown RBP5.13□□□□□ -1.59
SOX6-211ENST00000528429 CLEC2BQ92478 149 aa5.13□□□□□ -1.59
SOX6-211ENST00000528429 KRTAP26-1Q6PEX3 210 aa5.12□□□□□ -1.59
SOX6-211ENST00000528429 SND1-IT1Q9HBX3 110 aa5.12□□□□□ -1.59
SOX6-211ENST00000528429 FBN3Q75N90 2809 aa5.12□□□□□ -1.59
SOX6-211ENST00000528429 APLNQ9ULZ1 77 aa5.12□□□□□ -1.59
SOX6-211ENST00000528429 CAMK2N2Q96S95 79 aa5.11□□□□□ -1.59
SOX6-211ENST00000528429 NUPR2A6NF83 97 aa5.11□□□□□ -1.59
SOX6-211ENST00000528429 F8WEM9 126 aa5.11□□□□□ -1.59
SOX6-211ENST00000528429 MP68P56378 58 aa5.11□□□□□ -1.59
SOX6-211ENST00000528429 C15orf56Q8N910 161 aa5.11□□□□□ -1.59
SOX6-211ENST00000528429 TGP01266 2768 aa5.11□□□□□ -1.59
SOX6-211ENST00000528429 IGKV3D-7A0A0C4DH55 119 aa5.1□□□□□ -1.59
SOX6-211ENST00000528429 LECT2O14960 151 aa5.1□□□□□ -1.59
SOX6-211ENST00000528429 KRTAP21-3Q3LHN1 58 aa5.1□□□□□ -1.59
SOX6-211ENST00000528429 NKAPP1Q8N9T2 125 aa5.1□□□□□ -1.59
SOX6-211ENST00000528429 CASC10Q5T4H9 136 aa5.1□□□□□ -1.59
SOX6-211ENST00000528429 LYSTQ99698 3801 aa5.1□□□□□ -1.59
SOX6-211ENST00000528429 C6orf48Q9UBA6 75 aa5.1□□□□□ -1.59
SOX6-211ENST00000528429 H0Y9J4 135 aa5.09□□□□□ -1.59
SOX6-211ENST00000528429 SPTSSBQ8NFR3 76 aa5.09□□□□□ -1.59
SOX6-211ENST00000528429 KRTAP1-5Q9BYS1 174 aa5.09□□□□□ -1.59
SOX6-211ENST00000528429 CSMD3Q7Z407 3707 aa5.09□□□□□ -1.59
SOX6-211ENST00000528429 PRR3P79522 188 aaKnown RBP5.09□□□□□ -1.6
SOX6-211ENST00000528429 COX17Q14061 63 aa5.09□□□□□ -1.6
SOX6-211ENST00000528429 DIRC1Q969H9 104 aa5.09□□□□□ -1.6
SOX6-211ENST00000528429 RMI2Q96E14 147 aa5.09□□□□□ -1.6
SOX6-211ENST00000528429 SNURFQ9Y675 71 aa5.09□□□□□ -1.6
SOX6-211ENST00000528429 IGKV2-28A0A075B6P5 120 aa5.08□□□□□ -1.6
SOX6-211ENST00000528429 PSPHP1O15172 72 aa5.08□□□□□ -1.6
SOX6-211ENST00000528429 IGKV2D-28P01615 120 aa5.08□□□□□ -1.6
SOX6-211ENST00000528429 UBE2BP63146 152 aa5.08□□□□□ -1.6
SOX6-211ENST00000528429 C6orf99Q4VX62 202 aa5.08□□□□□ -1.6
SOX6-211ENST00000528429 C7orf65Q6ZTY9 151 aa5.08□□□□□ -1.6
SOX6-211ENST00000528429 XAGE1AQ9HD64 81 aa5.08□□□□□ -1.6
SOX6-211ENST00000528429 BAALC-AS2P0C853 105 aa5.08□□□□□ -1.6
SOX6-211ENST00000528429 LINC01554Q52M75 96 aa5.08□□□□□ -1.6
SOX6-211ENST00000528429 TRAV13-2A0A0B4J235 113 aa5.07□□□□□ -1.6
SOX6-211ENST00000528429 GVQW2A0A096LPI5 108 aaPredicted RBP5.07□□□□□ -1.6
SOX6-211ENST00000528429 PSCAO43653 123 aa5.07□□□□□ -1.6
SOX6-211ENST00000528429 A6NN06 94 aa5.06□□□□□ -1.6
SOX6-211ENST00000528429 NCR3O14931 201 aa5.06□□□□□ -1.6
SOX6-211ENST00000528429 SYCNQ0VAF6 134 aa5.06□□□□□ -1.6
SOX6-211ENST00000528429 KLKP1Q107X0 134 aa5.06□□□□□ -1.6
SOX6-211ENST00000528429 LINC00528Q8N1L1 170 aa5.05□□□□□ -1.6
SOX6-211ENST00000528429 Q8NDZ9 215 aa5.05□□□□□ -1.6
SOX6-211ENST00000528429 TRAV23DV6A0A075B6W5 121 aa5.05□□□□□ -1.6
SOX6-211ENST00000528429 M0R2N4 97 aa5.05□□□□□ -1.6
SOX6-211ENST00000528429 ATP5EP56381 51 aaPredicted RBP5.05□□□□□ -1.6
SOX6-211ENST00000528429 SMIM11BQ8TCY0 68 aa5.04□□□□□ -1.6
SOX6-211ENST00000528429 Q75L30 129 aa5.04□□□□□ -1.6
SOX6-211ENST00000528429 SLPIP03973 132 aa5.03□□□□□ -1.6
SOX6-211ENST00000528429 Q6JHZ5 121 aa5.03□□□□□ -1.6
SOX6-211ENST00000528429 Q6ZRP5 223 aa5.03□□□□□ -1.6
SOX6-211ENST00000528429 STARD9Q9P2P6 4700 aa5.03□□□□□ -1.6
SOX6-211ENST00000528429 PLECQ15149 4684 aaKnown RBP5.03□□□□□ -1.6
SOX6-211ENST00000528429 NBDYA0A0U1RRE5 68 aa5.03□□□□□ -1.6
SOX6-211ENST00000528429 LRCOL1A6NCL2 159 aa5.02□□□□□ -1.61
SOX6-211ENST00000528429 C16orf90A8MZG2 172 aa5.02□□□□□ -1.61
SOX6-211ENST00000528429 Q1T7F1 81 aa5.02□□□□□ -1.61
SOX6-211ENST00000528429 MUC7Q8TAX7 377 aa5.02□□□□□ -1.61
SOX6-211ENST00000528429 DNAH7Q8WXX0 4024 aa5.02□□□□□ -1.61
SOX6-211ENST00000528429 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.02□□□□□ -1.61
SOX6-211ENST00000528429 DNAL4O96015 105 aa5.01□□□□□ -1.61
SOX6-211ENST00000528429 RPL28P46779 137 aaKnown RBP5.01□□□□□ -1.61
SOX6-211ENST00000528429 UBE2AP49459 152 aa5.01□□□□□ -1.61
SOX6-211ENST00000528429 C22orf24Q9Y442 160 aa5.01□□□□□ -1.61
SOX6-211ENST00000528429 ATP11AUNQ6ZP68 121 aa5□□□□□ -1.61
SOX6-211ENST00000528429 FAM218AQ96MZ4 157 aa5□□□□□ -1.61
SOX6-211ENST00000528429 DYNC2H1Q8NCM8 4307 aaKnown RBP5□□□□□ -1.61
SOX6-211ENST00000528429 DNAH10Q8IVF4 4471 aa5□□□□□ -1.61
SOX6-211ENST00000528429 NDUFC1O43677 76 aa5□□□□□ -1.61
SOX6-211ENST00000528429 DNAH1Q9P2D7 4330 aa4.99□□□□□ -1.61
SOX6-211ENST00000528429 TRAV22A0A0B4J277 110 aa4.99□□□□□ -1.61
SOX6-211ENST00000528429 C9orf129Q5T035 196 aaKnown RBP4.99□□□□□ -1.61
SOX6-211ENST00000528429 TRAV7A0A075B6U4 112 aa4.99□□□□□ -1.61
SOX6-211ENST00000528429 TRBV10-3A0A0K0K1G6 114 aa4.99□□□□□ -1.61
SOX6-211ENST00000528429 LY6G6CO95867 125 aa4.99□□□□□ -1.61
SOX6-211ENST00000528429 FAM30AQ9NZY2 134 aa4.99□□□□□ -1.61
SOX6-211ENST00000528429 A0A087WYN8 130 aa4.98□□□□□ -1.61
SOX6-211ENST00000528429 WWC2-AS2Q96NR7 200 aa4.98□□□□□ -1.61
SOX6-211ENST00000528429 IGHV6-1A0A0B4J1U7 121 aa4.98□□□□□ -1.61
SOX6-211ENST00000528429 HCG22E2RYF7 251 aa4.98□□□□□ -1.61
SOX6-211ENST00000528429 IGKV2-24A0A0C4DH68 120 aa4.97□□□□□ -1.61
SOX6-211ENST00000528429 FAM168BA1KXE4 195 aa4.97□□□□□ -1.61
SOX6-211ENST00000528429 PRAC1Q96KF2 57 aa4.97□□□□□ -1.61
SOX6-211ENST00000528429 LINC00846Q9NV44 126 aa4.97□□□□□ -1.61
SOX6-211ENST00000528429 H0YGX0 51 aa4.97□□□□□ -1.61
SOX6-211ENST00000528429 IGLV6-57P01721 117 aa4.97□□□□□ -1.61
SOX6-211ENST00000528429 PLA2G1BP04054 148 aaKnown RBP4.97□□□□□ -1.61
SOX6-211ENST00000528429 C14orf177Q52M58 125 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms