RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 LYSTQ99698 3801 aa4.88□□□□□ -1.63
C11orf54-207ENST00000528288 NKAPP1Q8N9T2 125 aa4.87□□□□□ -1.63
C11orf54-207ENST00000528288 SNURFQ9Y675 71 aa4.87□□□□□ -1.63
C11orf54-207ENST00000528288 LINC00528Q8N1L1 170 aa4.87□□□□□ -1.63
C11orf54-207ENST00000528288 C7orf33Q8WU49 177 aa4.87□□□□□ -1.63
C11orf54-207ENST00000528288 WIPF1O43516 503 aa4.87□□□□□ -1.63
C11orf54-207ENST00000528288 TENM2Q9NT68 2774 aa4.86□□□□□ -1.63
C11orf54-207ENST00000528288 DNAH10Q8IVF4 4471 aa4.86□□□□□ -1.63
C11orf54-207ENST00000528288 TRBV7-4A0A0J9YYF1 115 aa4.85□□□□□ -1.63
C11orf54-207ENST00000528288 LINC01556Q5JQF7 62 aa4.85□□□□□ -1.63
C11orf54-207ENST00000528288 ATP5EP2Q5VTU8 51 aa4.85□□□□□ -1.63
C11orf54-207ENST00000528288 ST20-AS1Q8NBB2 130 aa4.85□□□□□ -1.63
C11orf54-207ENST00000528288 LINC00588Q9Y4M8 146 aa4.85□□□□□ -1.63
C11orf54-207ENST00000528288 STAB2Q8WWQ8 2551 aa4.85□□□□□ -1.63
C11orf54-207ENST00000528288 A0A0G2JQZ4 141 aa4.85□□□□□ -1.63
C11orf54-207ENST00000528288 A0A1W2PNN7 141 aa4.85□□□□□ -1.63
C11orf54-207ENST00000528288 OXTP01178 125 aa4.85□□□□□ -1.63
C11orf54-207ENST00000528288 FAM19A5Q7Z5A7 132 aaPredicted RBP4.85□□□□□ -1.63
C11orf54-207ENST00000528288 BPY2O14599 106 aa4.85□□□□□ -1.63
C11orf54-207ENST00000528288 H3BNG1 76 aa4.84□□□□□ -1.63
C11orf54-207ENST00000528288 RMI2Q96E14 147 aa4.84□□□□□ -1.64
C11orf54-207ENST00000528288 TM2D3Q9BRN9 247 aa4.84□□□□□ -1.64
C11orf54-207ENST00000528288 SRRM2Q9UQ35 2752 aaKnown RBP4.84□□□□□ -1.64
C11orf54-207ENST00000528288 HUWE1Q7Z6Z7 4374 aaKnown RBP4.83□□□□□ -1.64
C11orf54-207ENST00000528288 DPH3Q96FX2 82 aa4.83□□□□□ -1.64
C11orf54-207ENST00000528288 J3KT08 172 aa4.83□□□□□ -1.64
C11orf54-207ENST00000528288 Q8N377 158 aa4.83□□□□□ -1.64
C11orf54-207ENST00000528288 KRTAP7-1Q8IUC3 87 aa4.82□□□□□ -1.64
C11orf54-207ENST00000528288 ERC2-IT1O76042 136 aa4.82□□□□□ -1.64
C11orf54-207ENST00000528288 Q9BRP9 147 aa4.82□□□□□ -1.64
C11orf54-207ENST00000528288 IGKV2-24A0A0C4DH68 120 aa4.81□□□□□ -1.64
C11orf54-207ENST00000528288 DNAH10OSP0CZ25 163 aa4.81□□□□□ -1.64
C11orf54-207ENST00000528288 PDE6GP18545 87 aa4.81□□□□□ -1.64
C11orf54-207ENST00000528288 TMEM258P61165 79 aa4.81□□□□□ -1.64
C11orf54-207ENST00000528288 NREPQ16612 68 aa4.81□□□□□ -1.64
C11orf54-207ENST00000528288 SVIPQ8NHG7 77 aa4.81□□□□□ -1.64
C11orf54-207ENST00000528288 TRBV7-6A0A0J9YX20 115 aa4.81□□□□□ -1.64
C11orf54-207ENST00000528288 ETDCA0A1B0GVM5 59 aa4.8□□□□□ -1.64
C11orf54-207ENST00000528288 KCNQ1DNQ9H478 68 aa4.8□□□□□ -1.64
C11orf54-207ENST00000528288 COL7A1Q02388 2944 aa4.8□□□□□ -1.64
C11orf54-207ENST00000528288 UBE2BP63146 152 aa4.8□□□□□ -1.64
C11orf54-207ENST00000528288 DNAH3Q8TD57 4116 aa4.8□□□□□ -1.64
C11orf54-207ENST00000528288 DNAH1Q9P2D7 4330 aa4.8□□□□□ -1.64
C11orf54-207ENST00000528288 TRAV7A0A075B6U4 112 aa4.79□□□□□ -1.64
C11orf54-207ENST00000528288 CXCL6P80162 114 aa4.79□□□□□ -1.64
C11orf54-207ENST00000528288 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.79□□□□□ -1.64
C11orf54-207ENST00000528288 IGLV1-50A0A075B6I6 118 aa4.78□□□□□ -1.64
C11orf54-207ENST00000528288 F8WEM9 126 aa4.78□□□□□ -1.64
C11orf54-207ENST00000528288 K7EIL1 84 aa4.78□□□□□ -1.64
C11orf54-207ENST00000528288 DEFB116Q30KQ4 102 aa4.78□□□□□ -1.64
C11orf54-207ENST00000528288 Q6ZRX8 168 aa4.78□□□□□ -1.64
C11orf54-207ENST00000528288 H7BZZ5 65 aa4.78□□□□□ -1.64
C11orf54-207ENST00000528288 C4orf26Q17RF5 130 aa4.78□□□□□ -1.64
C11orf54-207ENST00000528288 DNAH9Q9NYC9 4486 aa4.78□□□□□ -1.64
C11orf54-207ENST00000528288 A0A1W2PNM2 257 aa4.77□□□□□ -1.65
C11orf54-207ENST00000528288 IGKV4-1P06312 121 aa4.77□□□□□ -1.65
C11orf54-207ENST00000528288 PRLHP81277 87 aa4.77□□□□□ -1.65
C11orf54-207ENST00000528288 KRTAP1-5Q9BYS1 174 aa4.77□□□□□ -1.65
C11orf54-207ENST00000528288 H3BQ85 93 aa4.77□□□□□ -1.65
C11orf54-207ENST00000528288 MRPL55Q7Z7F7 128 aaKnown RBP4.77□□□□□ -1.65
C11orf54-207ENST00000528288 FAM236DA0A1B0GTK5 79 aa4.77□□□□□ -1.65
C11orf54-207ENST00000528288 FAM236CP0DP71 79 aa4.77□□□□□ -1.65
C11orf54-207ENST00000528288 C1orf137Q5JT78 98 aa4.77□□□□□ -1.65
C11orf54-207ENST00000528288 CHTF8P0CG12 524 aa4.76□□□□□ -1.65
C11orf54-207ENST00000528288 KRTAP4-16G5E9R7 235 aaPredicted RBP4.76□□□□□ -1.65
C11orf54-207ENST00000528288 FAM30AQ9NZY2 134 aa4.76□□□□□ -1.65
C11orf54-207ENST00000528288 A0A096LNI7 61 aa4.75□□□□□ -1.65
C11orf54-207ENST00000528288 HIGD2AQ9BW72 106 aa4.75□□□□□ -1.65
C11orf54-207ENST00000528288 HRCT1Q6UXD1 115 aa4.75□□□□□ -1.65
C11orf54-207ENST00000528288 PSCAO43653 123 aa4.74□□□□□ -1.65
C11orf54-207ENST00000528288 FUSP35637 526 aaKnown RBP eCLIP4.74□□□□□ -1.65
C11orf54-207ENST00000528288 DHRS4-AS1Q9P1J3 65 aa4.74□□□□□ -1.65
C11orf54-207ENST00000528288 DNAH7Q8WXX0 4024 aa4.74□□□□□ -1.65
C11orf54-207ENST00000528288 RPS28P62857 69 aaKnown RBP4.74□□□□□ -1.65
C11orf54-207ENST00000528288 TLX1NBP0CAT3 122 aa4.74□□□□□ -1.65
C11orf54-207ENST00000528288 SMIM29Q86T20 159 aa4.74□□□□□ -1.65
C11orf54-207ENST00000528288 IGLV5-48A0A075B6I7 105 aa4.73□□□□□ -1.65
C11orf54-207ENST00000528288 REG3GQ6UW15 175 aa4.73□□□□□ -1.65
C11orf54-207ENST00000528288 PRYO14603 147 aa4.73□□□□□ -1.65
C11orf54-207ENST00000528288 KRTAP11-1Q8IUC1 163 aa4.73□□□□□ -1.65
C11orf54-207ENST00000528288 TMEM254Q8TBM7 123 aa4.73□□□□□ -1.65
C11orf54-207ENST00000528288 SPRR1AP35321 89 aa4.72□□□□□ -1.65
C11orf54-207ENST00000528288 KLKP1Q107X0 134 aa4.72□□□□□ -1.65
C11orf54-207ENST00000528288 UBE2DNLQ8IWF7 75 aa4.72□□□□□ -1.65
C11orf54-207ENST00000528288 Q5XG85 94 aa4.72□□□□□ -1.65
C11orf54-207ENST00000528288 K7EQZ3 153 aa4.72□□□□□ -1.65
C11orf54-207ENST00000528288 PHF5AQ7RTV0 110 aaKnown RBP4.72□□□□□ -1.65
C11orf54-207ENST00000528288 LINC00476Q8WZB0 136 aa4.72□□□□□ -1.65
C11orf54-207ENST00000528288 F8WDY8 70 aa4.71□□□□□ -1.66
C11orf54-207ENST00000528288 TNP2Q05952 138 aa4.71□□□□□ -1.66
C11orf54-207ENST00000528288 Q8NBF4 154 aa4.71□□□□□ -1.66
C11orf54-207ENST00000528288 PLA2G2DQ9UNK4 145 aa4.71□□□□□ -1.66
C11orf54-207ENST00000528288 OCR1Q9BZK8 76 aa4.71□□□□□ -1.66
C11orf54-207ENST00000528288 LINC00474Q9P2X8 69 aa4.71□□□□□ -1.66
C11orf54-207ENST00000528288 IGLV5-37A0A075B6J1 123 aa4.7□□□□□ -1.66
C11orf54-207ENST00000528288 RPL37AP61513 92 aaKnown RBP4.7□□□□□ -1.66
C11orf54-207ENST00000528288 DSCR10P59022 87 aa4.7□□□□□ -1.66
C11orf54-207ENST00000528288 BCE1O60756 84 aa4.69□□□□□ -1.66
C11orf54-207ENST00000528288 IGFL1Q6UW32 110 aa4.69□□□□□ -1.66
C11orf54-207ENST00000528288 A0A087WSZ3 146 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms